| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,261,349 | G→A | 16.9% | intergenic (+43/‑320) | yjbM → / → dusA | uncharacterized protein/tRNA‑dihydrouridine synthase A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,261,349 | 0 | G | A | 16.9% | 417.6 / 64.6 | 177 | intergenic (+43/‑320) | yjbM/dusA | uncharacterized protein/tRNA‑dihydrouridine synthase A |
| Reads supporting (aligned to +/- strand): ref base G (68/79); new base A (14/16); total (82/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.61e-01 | |||||||||||
Only 100 of 179 total aligned reads displayed.
CTTACAGACACTTCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAAC > NC_000913/4261250‑4261446 | cTTACAGACACTTCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAgg > 1:448200/1‑100 (MQ=255) tACAGACACTTCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGAc > 1:2857859/1‑100 (MQ=255) aGACACTTCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCa < 1:3632054/100‑1 (MQ=255) gACACTTCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCaa > 1:3199479/1‑100 (MQ=255) gACACTTCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCaa > 1:2928590/1‑100 (MQ=255) cTTCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAAtatt > 1:2943938/1‑100 (MQ=255) cTTCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAAtatt > 2:2830786/1‑100 (MQ=255) cTTCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAAtatt > 1:2027801/1‑100 (MQ=255) tCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAAtattta < 1:3368214/100‑1 (MQ=255) cTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAAtatttat > 1:2745496/1‑100 (MQ=255) tAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAAtatttatt < 2:1162168/100‑1 (MQ=255) tAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAAtatttatt < 1:2213074/100‑1 (MQ=255) aaaTTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTg > 2:2589567/1‑100 (MQ=255) aaaTTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTg < 1:3378864/100‑1 (MQ=255) aattaattTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTgg > 2:3202285/1‑100 (MQ=255) aattaattTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTgg < 1:2505251/100‑1 (MQ=255) taaatTATTATTTGTTCGGGCTTAAATCGGAGAAATAATATGTGAAGTTATACGATAATATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGt < 2:1774321/99‑1 (MQ=255) aattTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTc > 1:2271817/1‑100 (MQ=255) aattTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATAAATATTGGGtc < 1:1800242/99‑2 (MQ=255) attTATTATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGGAGGCATTATAT‑AAAAGAACCCAATAAATATTGGGTCCt < 2:3593181/100‑1 (MQ=38) attTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCt > 1:1506636/1‑100 (MQ=255) tttATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGAACCCAATAAATATTGGGTCCtt < 1:2073321/100‑1 (MQ=38) ttATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCttt > 2:559479/1‑100 (MQ=255) ttATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGAACCCAATAAATATTGGGTCCttt < 1:2702355/100‑1 (MQ=38) tATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCtttt < 1:1343867/100‑1 (MQ=255) aTGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGAACCCAATAAATATTGGGTCCtttta < 2:2042417/100‑2 (MQ=38) gatctGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATATAAAAAGAACCCAATAAATATTGGGTCCttttat < 2:490971/96‑3 (MQ=25) gATTTGTTCGGGGTTAAATCGGAGAAATAATATTTTAAGTTTTTCGATAGTATGGAAGGCATTATAT‑AAAATGACCCAATATTTATTGGGTTCTTTTTtc < 2:694334/100‑1 (MQ=255) gATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTtc < 1:2552133/100‑1 (MQ=255) gATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTtc < 2:3069095/100‑1 (MQ=255) gATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGAACCCAATAAATATTGGGTCCttttata < 1:1948462/100‑4 (MQ=37) gATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGAACCCAATAAATATTGGGTCCttttata < 2:3195260/100‑4 (MQ=37) aTTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTtct < 1:2315119/100‑1 (MQ=255) aTTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTtct > 2:2356571/1‑100 (MQ=255) tttGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTtctc < 1:2362039/100‑1 (MQ=255) ttGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTctct < 1:428028/100‑1 (MQ=255) ttGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTctct < 1:710422/100‑1 (MQ=255) tGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTa < 1:2087361/100‑1 (MQ=255) gTTCGGGGTTAAATCGGAGAAATAATATGTGAAGGTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAAGATTAATTGGGTTCTTTTTTCTCTAt > 2:887559/1‑100 (MQ=255) ttCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATc < 1:2061491/100‑1 (MQ=255) ggggTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAAt > 1:2416142/1‑100 (MQ=255) ggggTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAAt > 1:1514257/1‑100 (MQ=255) gggTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATa < 2:1399641/100‑1 (MQ=255) gTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACt > 2:1241016/1‑100 (MQ=255) aaTCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTa > 1:2701840/1‑100 (MQ=255) cGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCa > 1:3098652/1‑100 (MQ=255) cGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCa > 1:500144/1‑100 (MQ=255) cGGAGAAATAATATGTGAAGCTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCa > 2:3346019/1‑100 (MQ=255) ggAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAg < 1:323740/100‑1 (MQ=255) gagaAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAgg < 2:1498317/100‑1 (MQ=255) agaAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAggg < 2:1819083/100‑1 (MQ=255) gaAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAgggn < 2:2426593/100‑2 (MQ=255) aataatATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGgaga < 2:3335545/100‑1 (MQ=255) aataatATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGgaga < 2:1296558/100‑1 (MQ=255) ataataTGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGat > 2:2147484/1‑100 (MQ=255) taataTGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAATGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGata < 2:2874654/100‑1 (MQ=255) taataTGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGata < 1:55060/100‑1 (MQ=255) atGTGAAGTTCTTCGATGGTATGGAAAGCATTATAT‑AAAAGGACCCAAGATTTATTGGGTTCTTTTTTGTCTATCACTACTATTAACattgctgatt > 2:3354358/1‑88 (MQ=255) atGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATc > 1:3048497/1‑100 (MQ=255) tgAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCAcc < 1:1270835/100‑1 (MQ=255) tgAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCAcc > 2:2753280/1‑100 (MQ=255) tgAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCAcc < 1:2997690/100‑1 (MQ=255) gAAGTTCTTCGATAGTCTGGAAGGCATTATAT‑AAAAGGGCCGAGTAGTTATTGGGTTCTTTTTTCTCTATCAATCCTATTAGCAGGGAGATATATCAcc > 2:2249457/1‑99 (MQ=255) gAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCa > 1:94870/1‑100 (MQ=255) tcttcGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGtt < 1:1126202/100‑1 (MQ=255) tcttcGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGtt > 1:3154762/1‑100 (MQ=255) cttcGATAGTATGTAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGtt < 2:2491549/99‑1 (MQ=255) cttcGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGttt > 1:1328588/1‑100 (MQ=255) tcGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTaa > 2:3365833/1‑100 (MQ=255) cGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATTTATATTATTAGCAGGGAGATATATCACCATTGTTTact > 2:36514/1‑98 (MQ=255) cGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAAt > 2:1434977/1‑100 (MQ=255) cGATAGTATGGAAGGCATTATAT‑AAAAGAACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAAt < 2:3089786/100‑1 (MQ=255) taatATGGAAGGCATTATAT‑AAAAAGGCCCAATATTTATTGGGGTCTTTTTTCCCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAAtgtg < 2:2935461/97‑1 (MQ=255) tAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAAtgtg > 1:788108/1‑100 (MQ=255) tAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAAtgtg < 1:3365858/100‑1 (MQ=255) gTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAAtgtgtg < 2:1743261/100‑1 (MQ=255) tGGAAGCCATTATAT‑AAAAGGACCCAATATTTATTGTGTTCTTTTTTCTCTATCAATACTATTAGCAGGTAGATATATCACCAGAGTTTAAtgtgtg < 2:186865/97‑1 (MQ=255) aGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGAtttttt < 1:1374206/100‑1 (MQ=255) gCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTtttat < 1:802232/100‑1 (MQ=255) gCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTttta < 1:1850650/99‑1 (MQ=255) cATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTtttatt < 1:3454966/100‑1 (MQ=255) cATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTtttatt < 1:1523179/100‑1 (MQ=255) aTTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTtttattt > 2:1264450/1‑100 (MQ=255) aTTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATAAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTtttattt > 2:614729/1‑100 (MQ=255) tatat‑aAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTttatttat < 1:1195782/100‑1 (MQ=255) tatat‑aAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTttatttat > 2:3215297/1‑100 (MQ=255) agaggaaaaaGAACCCAATAAATATTGGGTCCTTTTGTCTCTATAAATACTATTCGCGGGGAGATATTTTACCAGAGTTTGATGTGTGATTTtttattt > 2:2672849/7‑99 (MQ=16) agagaaaaaaGAACCCAATAAATATTGGGTCCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTtttattta > 2:2816601/7‑100 (MQ=25) gagaaaaaaGAACCCAATAATTATTGGGTCCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATTACCAGAGTTTAATGTGTGATTTTttatttat > 2:2227183/6‑100 (MQ=37) gagaaaaaaGAACCCAATAAATATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTttatttat > 1:1502191/6‑100 (MQ=38) gagaaaaaaGAACCCAATAAATATTGGGTCCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTtttattta > 2:2673367/6‑99 (MQ=25) gagaaaaaaGAACCCAATAAATATTGGGTCCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTttatttat > 1:2785490/6‑100 (MQ=25) gagaaaaaaGAACCCAATAAATATTGGGTCCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTttatttat > 1:1024399/6‑100 (MQ=25) gagaaaaaaGAACCCAATAAATATTGGGTCCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTttatttat > 1:2084214/6‑100 (MQ=37) gagaaaaaaGAACCCAATAAATATTGGGTCCTTTTTTCTCTATCAATACTATTAGCAGGGAAATATATCACCAGAGTTTAATGTGTGATTTTgtatttat > 2:1888443/6‑100 (MQ=25) tat‑aAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTAtc > 2:3558662/1‑99 (MQ=255) at‑aAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTAtcgt < 1:591224/100‑1 (MQ=255) t‑aAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATAGCACCAGAGTTTAATGTGTGATTTTTTATTTAtcgtc > 1:1689227/1‑100 (MQ=255) aaGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGaa > 1:3033125/1‑100 (MQ=255) aGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAAc < 1:1428805/100‑1 (MQ=255) | CTTACAGACACTTCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAAC > NC_000913/4261250‑4261446 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |