| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,312,074 | C→T | 17.6% | intergenic (‑32/+27) | alsB ← / ← alsR | D‑allose ABC transporter periplasmic binding protein/d‑allose‑inducible als operon transcriptional repressor; autorepressor; repressor of rpiR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,312,074 | 0 | C | T | 17.6% | 393.2 / 66.7 | 165 | intergenic (‑32/+27) | alsB/alsR | D‑allose ABC transporter periplasmic binding protein/d‑allose‑inducible als operon transcriptional repressor; autorepressor; repressor of rpiR |
| Reads supporting (aligned to +/- strand): ref base C (68/68); new base T (8/21); total (76/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.92e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.61e-01 | |||||||||||
Only 100 of 169 total aligned reads displayed.
GCAAAAGCGCTGGTTGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCA > NC_000913/4311975‑4312173 | gcaAAAGCGCTGGTTGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAAc < 2:1605658/100‑1 (MQ=255) caAAAGCGCTGGTTGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACt > 1:1494748/1‑100 (MQ=255) aaGCGCTGGTTGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCcg < 2:282129/100‑1 (MQ=255) aGCGCTGGTTGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCcgc < 1:2977532/100‑1 (MQ=255) cgcTGGTTGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGa > 1:394085/1‑100 (MQ=255) tGGTTGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATgg > 2:1105150/1‑100 (MQ=255) ggTTGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGc > 1:2645003/1‑100 (MQ=255) ggTTGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGc > 1:351155/1‑100 (MQ=255) gTTGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCg < 1:780255/100‑1 (MQ=255) ttGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATcgcgn < 1:1388462/100‑2 (MQ=255) tGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCgg < 2:1409702/99‑1 (MQ=255) tGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGa > 2:2726477/1‑100 (MQ=255) aacaTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTa < 1:2412668/100‑1 (MQ=255) aacaTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTa < 1:2662697/100‑1 (MQ=255) acaTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTAc > 1:1063650/1‑100 (MQ=255) acaTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTAc > 1:1477262/1‑100 (MQ=255) caTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTAcc < 1:3183006/100‑1 (MQ=38) caTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTAcc < 2:683282/100‑1 (MQ=38) caTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTAcc < 1:2333806/100‑1 (MQ=255) aTTAAGCCCAGGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCt < 1:3585513/100‑1 (MQ=38) aTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCt < 2:1742333/100‑1 (MQ=38) aTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCt > 1:1425184/1‑100 (MQ=255) ttAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCtg < 2:3612646/100‑2 (MQ=38) ttAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCtg < 1:2806504/100‑2 (MQ=38) ttAAGCCCACGAGTGTGCCGCTGAAATACTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCtg < 2:159595/100‑2 (MQ=38) tAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCttt < 2:1548537/100‑1 (MQ=255) aaGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCtgtc < 1:816292/100‑4 (MQ=37) cgatctcGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCttttc < 2:1784535/94‑2 (MQ=255) aGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCtgtcc < 1:2260602/100‑5 (MQ=37) aGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTACTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCttttt > 1:2148295/1‑100 (MQ=255) gCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCtgtccc < 2:1158403/100‑6 (MQ=37) gCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑c < 2:2977616/100‑1 (MQ=255) gCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑c > 2:3001092/1‑100 (MQ=255) cccACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGTGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑Ct < 1:1255104/100‑1 (MQ=255) cccACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCtgtcccc < 2:426778/100‑7 (MQ=37) cccACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑Ct > 2:2910203/1‑100 (MQ=255) ccACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑cn < 2:1306252/99‑2 (MQ=255) cACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTa < 2:215281/100‑1 (MQ=255) ctaGTGGGCAGCTTAAATATTTCAGATATTTATTCATACTACTGTTCTCACGGTAAGGTGACAGTTAACTCCGCGATGGCGGAATTCCCTTTTC‑CTTAtt < 2:2621766/98‑1 (MQ=255) cGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCttttcagatcg > 1:1784543/1‑93 (MQ=255) aGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTc < 1:3099139/100‑1 (MQ=255) gtgCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAgc < 1:212777/100‑1 (MQ=255) gtgCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAgc > 2:1448866/1‑100 (MQ=255) gCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAgcgc > 1:1728521/1‑100 (MQ=255) ccGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAgcgcg > 1:259979/1‑100 (MQ=255) gCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGcc < 1:3334996/100‑1 (MQ=255) gCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGcc > 2:2201155/1‑100 (MQ=255) gAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTgg > 1:23975/1‑100 (MQ=255) atatTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTga < 2:2353514/100‑1 (MQ=255) atTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTGAGCGCGCCTGGTgaga > 2:2123781/1‑100 (MQ=255) atTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTgaga > 1:2637086/1‑100 (MQ=255) cAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAgaagaa > 1:1081604/1‑100 (MQ=255) gATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAAt < 2:2690156/100‑1 (MQ=255) atatTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATc < 2:1714146/100‑1 (MQ=255) tatttattCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATca < 1:1116346/100‑1 (MQ=255) atttattCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATcaa > 1:1054003/1‑100 (MQ=255) tttattCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATCACCTTTTT‑CTTATTTCAGCGCGCCTGGTCAGAAGAAATcacc < 1:2468186/100‑3 (MQ=255) ttattCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATcaaca < 1:3574788/100‑1 (MQ=255) tattCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATcaacaa > 2:460587/1‑100 (MQ=255) ttCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAAtt > 2:3486503/1‑100 (MQ=255) tCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTg > 1:913117/1‑100 (MQ=255) cATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTgc < 1:1168569/100‑1 (MQ=255) taataaTGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTgcgc > 2:3508321/1‑100 (MQ=255) taataaTGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTgcgc < 2:741051/100‑1 (MQ=255) taataaTGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTgcgc < 1:1328372/100‑1 (MQ=255) ataatGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCg > 1:2516698/1‑100 (MQ=255) ataatGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCg > 1:1000014/1‑100 (MQ=255) ataatGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCg > 1:2585356/1‑100 (MQ=255) ataatGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCg > 2:1015000/1‑100 (MQ=255) taatGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCgg > 1:890150/1‑100 (MQ=255) taatGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCgg < 2:1843512/100‑1 (MQ=255) atGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGtt > 1:2537069/1‑100 (MQ=255) gTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGtttt > 1:2717741/1‑100 (MQ=255) gTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGtttt < 1:3099368/100‑1 (MQ=255) ctcACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTg < 2:3483004/100‑1 (MQ=255) ctcACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTg < 2:3442074/100‑1 (MQ=255) tcACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGc > 1:455659/1‑100 (MQ=255) aaGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCatattaa < 2:2110404/100‑1 (MQ=255) aagaaaaatgTAATTCCGCCATCGCGGAGATACCTTTTT‑CTTATTTCAGCGCACCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCatattaat > 2:1236224/10‑100 (MQ=25) aGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCatattaat > 1:3385239/1‑100 (MQ=255) ggggACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCatattaata > 2:351446/1‑100 (MQ=255) ggggACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCatattaata > 2:2491391/1‑100 (MQ=255) cAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGc < 1:2251732/100‑1 (MQ=255) cAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGc < 1:786426/100‑1 (MQ=255) cAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGc < 2:2843678/100‑1 (MQ=255) aaGGTAATTCCGCCATCGCGGAGTTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGc > 2:50346/2‑100 (MQ=38) aGGTAATTCCGCCATCGCGGAGTTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCt > 1:408331/1‑100 (MQ=38) aGGTAATTCCGCCATCGCGGAGTTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCt > 2:2349166/1‑100 (MQ=38) aGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCt < 1:2195446/100‑1 (MQ=255) aGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCt < 1:2882183/100‑1 (MQ=255) aGGGAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCt < 2:3525973/100‑1 (MQ=255) ggTAATTCCGCCATCGCGGAGTTACCTGTCCCCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCt > 1:3186369/1‑100 (MQ=21) ggTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCtt > 1:1523628/1‑100 (MQ=255) ggTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCtt > 2:803956/1‑100 (MQ=255) ggTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCtt > 2:3214206/1‑100 (MQ=255) gTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCTCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCtt < 2:614078/99‑1 (MQ=255) gTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTg < 1:2998313/100‑1 (MQ=255) aCTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTc < 1:3209224/100‑1 (MQ=255) aCTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTc > 1:1277367/1‑100 (MQ=255) cTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCa > 1:3025092/1‑100 (MQ=255) | GCAAAAGCGCTGGTTGACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCA > NC_000913/4311975‑4312173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |