| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,312,089 | A→G | 16.8% | intergenic (‑47/+12) | alsB ← / ← alsR | D‑allose ABC transporter periplasmic binding protein/d‑allose‑inducible als operon transcriptional repressor; autorepressor; repressor of rpiR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,312,089 | 0 | A | G | 16.8% | 362.6 / 66.4 | 161 | intergenic (‑47/+12) | alsB/alsR | D‑allose ABC transporter periplasmic binding protein/d‑allose‑inducible als operon transcriptional repressor; autorepressor; repressor of rpiR |
| Reads supporting (aligned to +/- strand): ref base A (69/65); new base G (7/20); total (76/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.95e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.21e-02 | |||||||||||
Only 100 of 165 total aligned reads displayed.
GACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCG > NC_000913/4311990‑4312188 | gACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGaa > 2:2143546/1‑100 (MQ=255) aacaTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTa < 1:2412668/100‑1 (MQ=255) acaTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTAc > 2:2529512/1‑100 (MQ=255) acaTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTAc > 1:1063650/1‑100 (MQ=255) acaTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTAc > 1:1477262/1‑100 (MQ=255) acaTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTAc > 1:1331633/1‑100 (MQ=255) caTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTAcc < 1:3183006/100‑1 (MQ=38) caTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTAcc < 1:2657620/100‑1 (MQ=255) caTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTAcc < 1:2333806/100‑1 (MQ=255) aTTAAGCCCAGGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCt < 1:3585513/100‑1 (MQ=38) aTTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCt > 1:1425184/1‑100 (MQ=255) ttAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCtg < 1:106497/100‑2 (MQ=38) ttAAGCCCACGAGTGTGCCGCTGAAATACTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCtg < 2:159595/100‑2 (MQ=38) tAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCtgt < 1:1183577/100‑3 (MQ=38) tAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCttt < 2:1548537/100‑1 (MQ=255) gCCCTCGAGTGTGACGCTGAAATATTTCAGATATTTGTTCATAATAATGTTCTCCCGGTAAGGGGACCGGTAACTCCGCGATGGCGGAATTACCTTTTT‑c < 1:2552020/100‑1 (MQ=255) gCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCtgtccc < 1:1628125/100‑6 (MQ=37) gCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑c < 2:2977616/100‑1 (MQ=255) ctaCGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGCTCTGACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑c < 2:3316080/96‑1 (MQ=255) ccACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAATTCCGCCATCGCGGAGTTACCtgtccc < 2:1158377/98‑6 (MQ=37) ccACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑cn < 2:1306252/99‑2 (MQ=255) cACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTa < 2:215281/100‑1 (MQ=255) ctaGTGGGCAGCTTAAATATTTCAGATATTTATTCATACTACTGTTCTCACGGTAAGGTGACAGTTAACTCCGCGATGGCGGAATTCCCTTTTC‑CTTAtt < 2:2621766/98‑1 (MQ=255) cGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCttttcagatcg > 1:1784543/1‑93 (MQ=255) aGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTc < 1:3099139/100‑1 (MQ=255) gtgtGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCa < 2:1819118/100‑1 (MQ=255) gtgCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAgc < 1:2343050/100‑1 (MQ=255) gtgCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAgc < 1:212777/100‑1 (MQ=255) tgCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAgcg > 2:1352319/1‑100 (MQ=255) gCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAgcgc > 1:3370580/1‑100 (MQ=255) ccGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAgcgcg > 1:259979/1‑100 (MQ=255) gCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGcc > 2:2201155/1‑100 (MQ=255) gAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTgg > 1:2442421/1‑100 (MQ=255) aaTATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTg < 2:1728513/100‑1 (MQ=255) atatTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CCTATTTCAGCGCGCCTGGTga < 2:3591835/100‑1 (MQ=255) atTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTgaga > 1:2637086/1‑100 (MQ=255) atTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTgaga > 1:1742157/1‑100 (MQ=255) tttCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGagaa < 2:1502437/100‑1 (MQ=255) atatTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATc < 1:834027/100‑1 (MQ=255) atatTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATc < 2:1714146/100‑1 (MQ=255) tatttattCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATca < 1:1116346/100‑1 (MQ=255) ttattCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATcaaca < 1:3574788/100‑1 (MQ=255) tattCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATcaacaa > 2:460587/1‑100 (MQ=255) tattCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATcaacaa > 2:3145799/1‑100 (MQ=255) tCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTg > 1:913117/1‑100 (MQ=255) cATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTgc < 1:1168569/100‑1 (MQ=255) taataaTGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTgcgc > 2:3508321/1‑100 (MQ=255) taataaTGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTgcgc > 2:2707498/1‑100 (MQ=255) taataaTGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTgcgc < 2:741051/100‑1 (MQ=255) taataaTGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTgcgc < 1:1328372/100‑1 (MQ=255) ataatGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCg > 2:1015000/1‑100 (MQ=255) ataatGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCg > 1:1000014/1‑100 (MQ=255) ataatGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCg > 1:2585356/1‑100 (MQ=255) ataatGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCg > 1:2516698/1‑100 (MQ=255) taatGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCgg < 2:1843512/100‑1 (MQ=255) gTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGtttt < 1:3099368/100‑1 (MQ=255) gTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGtttt > 1:2717741/1‑100 (MQ=255) ctcACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTg < 2:733893/100‑1 (MQ=255) ctcACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTg < 2:3442074/100‑1 (MQ=255) ctcACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTg < 2:3483004/100‑1 (MQ=255) ctcACGGTAAGGGGACAGGTAACTCCGAGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGtttttt > 2:2469809/1‑99 (MQ=255) tcACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGc > 1:455659/1‑100 (MQ=255) nataagaaaaaGGTAATTCCGCCATCGCGGAGTTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCatatt > 2:2904130/11‑100 (MQ=25) aaGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCatattaa < 2:2110404/100‑1 (MQ=255) aagaaaaatgTAATTCCGCCATCGCGGAGATACCTTTTT‑CTTATTTCAGCGCACCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCatattaat > 2:1236224/10‑100 (MQ=25) ggggACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGGAGAAATCAAGAATTGCGCCGGTTTTTTGCatattaat > 2:2961273/1‑99 (MQ=255) ggggACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCatattaata > 2:351446/1‑100 (MQ=255) aaaaGGTAATTCCGCCATCGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCatattaatatta > 2:3502456/4‑100 (MQ=38) cAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGc < 1:2251732/100‑1 (MQ=255) cAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGc < 1:786426/100‑1 (MQ=255) cAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGc < 2:2843678/100‑1 (MQ=255) aaGGTAATTCCGCCATCGCGGAGTTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGc > 2:50346/2‑100 (MQ=38) aGGTAATTCCGCCATCGCGGAGTTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCt > 2:2349166/1‑100 (MQ=38) aGGTAATTCCGCCATCGCGGAGTTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCt > 1:408331/1‑100 (MQ=38) aGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCt < 1:2882183/100‑1 (MQ=255) aGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCt < 1:2195446/100‑1 (MQ=255) ggTAATTCCGCCATCGCGGAGTTACCTGTCCCCTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCt > 1:3186369/1‑100 (MQ=21) ggTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCtt > 2:803956/1‑100 (MQ=255) gTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCTCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCtt < 2:614078/99‑1 (MQ=255) gTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTg < 1:2998313/100‑1 (MQ=255) tAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGt < 1:803962/100‑1 (MQ=255) tAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGt < 1:2149964/100‑1 (MQ=255) aCTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTc > 1:1277367/1‑100 (MQ=255) aCTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTc < 1:3209224/100‑1 (MQ=255) cTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCa > 1:3025092/1‑100 (MQ=255) cTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCACCGGTTTTTTGCATATTAATATTAGCTTGTTCa > 1:3423588/1‑100 (MQ=255) ccGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAAt > 1:2668355/1‑100 (MQ=255) gcgATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGt > 2:1133596/1‑100 (MQ=255) cgATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGtt < 1:1015008/100‑1 (MQ=255) ggCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGc < 1:946638/100‑1 (MQ=255) gCGGAATTACTTTTTT‑CCTATTTCAGCGCGCCTGGTGGGAAGAAATCAACCAGTGCGCCGGTTTTTTGCATATTAATATTTGCTTGTTCACTGTTGAGc < 2:391095/99‑1 (MQ=255) cGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTg > 2:3583584/1‑100 (MQ=255) cGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTg > 1:2734464/1‑100 (MQ=255) ggAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTgg > 1:3224944/1‑100 (MQ=255) ggAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTgg > 1:3225413/1‑100 (MQ=255) gAATTATCTTTTG‑CTTATTTCAACGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTggg < 2:2332021/100‑1 (MQ=255) gAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTggg < 1:1448874/100‑1 (MQ=255) gAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTgg > 2:1776925/1‑99 (MQ=255) aTTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCg < 1:2817067/100‑1 (MQ=255) aTTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCg < 1:3624606/100‑1 (MQ=255) | GACAACATTAAGCCCACGAGTGTGCCGCTGAAATATTTCAGATATTTATTCATAATAATGTTCTCACGGTAAGGGGACAGGTAACTCCGCGATGGCGGAATTACCTTTTT‑CTTATTTCAGCGCGCCTGGTGAGAAGAAATCAACAATTGCGCCGGTTTTTTGCATATTAATATTAGCTTGTTCAATGTTGAGCTGGGCG > NC_000913/4311990‑4312188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |