| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,470,957 | G→A | 16.2% | intergenic (‑44/+29) | ridA ← / ← pyrI | enamine/imine deaminase, reaction intermediate detoxification/aspartate carbamoyltransferase, regulatory subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,470,957 | 0 | G | A | 16.2% | 383.0 / 55.3 | 160 | intergenic (‑44/+29) | ridA/pyrI | enamine/imine deaminase, reaction intermediate detoxification/aspartate carbamoyltransferase, regulatory subunit |
| Reads supporting (aligned to +/- strand): ref base G (70/64); new base A (10/16); total (80/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.35e-01 | |||||||||||
Only 100 of 168 total aligned reads displayed.
TGTACGTAAGGACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCATTTGAGCGCGATATCATTGG > NC_000913/4470858‑4471056 | gTACGTAAGGACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTCTTACCGCGGTA‑‑AAAAGTCTGGCTCATTATAgg > 2:726922/1‑100 (MQ=255) aCGTAAGGACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGa > 2:1494024/1‑100 (MQ=255) cGTAAGGACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAg > 1:69225/1‑100 (MQ=255) cGTAAGGACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAg > 2:423152/1‑100 (MQ=255) cGTAAGGACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTGCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAg > 2:2333247/1‑100 (MQ=255) tAAGGACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGcc > 1:1525329/1‑100 (MQ=255) ggACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGa > 2:1562010/1‑100 (MQ=255) gACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCCCTATAATGAGCCAGAc < 2:1796317/100‑1 (MQ=38) gACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCCCTATAATGAGCCAGAc < 2:2629747/100‑1 (MQ=38) gACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCCCTATAATGAGCCAGAc < 1:2266665/100‑1 (MQ=38) gACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCCCTATAATGAGCCAGAc < 2:122247/100‑1 (MQ=38) gACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCCCTATAATGAGCCAGAc < 2:1850630/100‑1 (MQ=38) gACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCCCTATAATGAGCCAGAc < 2:2089529/100‑1 (MQ=38) gACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCCCTATAATGAGCCAGAc < 1:1123630/100‑1 (MQ=38) gACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCCCTATAATGAGCCAGAc < 1:3063705/100‑1 (MQ=38) aCCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCCCTATAATGAGCCAGACt < 1:1046231/100‑1 (MQ=38) aCCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCCCTATAATGAGCCAGACt < 2:2860909/100‑1 (MQ=38) aCCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACt > 1:1347155/1‑100 (MQ=255) ccGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCCCTATAATGAGCCAGACtt < 1:462579/100‑1 (MQ=38) ccGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACtt > 2:858489/1‑100 (MQ=255) ccGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACtt > 1:893726/1‑100 (MQ=255) ccGATAGCTGCCGGTGCATTTTCCGTCGAGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACtt < 2:701284/100‑1 (MQ=255) gATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACtttt > 1:1491033/1‑100 (MQ=255) aTAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACtttt > 1:1722835/1‑99 (MQ=255) aTAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTtta < 1:1755429/100‑1 (MQ=255) tAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTttat > 1:3258462/1‑100 (MQ=255) tGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTAcc > 1:2560156/1‑100 (MQ=255) gCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTGCCa > 1:105677/1‑100 (MQ=255) cGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAAc < 2:2982082/100‑1 (MQ=255) cGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAAc < 2:843112/100‑1 (MQ=255) gTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTAATAAAAGTCTGGCTCCCTATAATGAGCCAGACtttttaccgctgt < 1:700050/100‑10 (MQ=17) gTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCg < 2:1602399/100‑1 (MQ=255) tacATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGc < 1:1912124/98‑1 (MQ=255) gCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCa > 2:3323309/1‑100 (MQ=255) cATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCaa > 1:2617804/1‑100 (MQ=255) tttCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCaatta > 1:1377026/1‑100 (MQ=255) ttCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTCTAGGGAGCCAGACTTTTATTACCAACCGCaattaa > 2:2742581/1‑100 (MQ=255) cGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTg > 1:2160833/1‑100 (MQ=255) gTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTgg < 1:3581983/100‑1 (MQ=255) gTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAAACGCAATTAATTgg > 2:2390718/1‑100 (MQ=255) cgATAGTTTTGCTCATGATTTCTCCTTTATTACTGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAg > 2:2385801/1‑100 (MQ=255) tAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGcac < 1:2708912/100‑1 (MQ=255) gTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGcacca > 1:3416401/1‑100 (MQ=255) ttttGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGcaccac < 1:3323334/100‑1 (MQ=255) ttGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACAt > 1:839693/1‑100 (MQ=255) gCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTa > 1:408131/1‑100 (MQ=255) cTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTAt < 2:1459506/100‑1 (MQ=255) cTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTAt > 2:446632/1‑100 (MQ=255) tCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATg < 1:102250/100‑1 (MQ=255) tCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATg < 1:1060948/100‑1 (MQ=255) cATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATgg > 2:388825/1‑100 (MQ=255) aTGATTTCTCCTTTATTACAGCTGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATggg < 2:2461245/100‑1 (MQ=255) tGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGa > 1:2056863/1‑100 (MQ=255) gATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGaa > 2:3138400/1‑100 (MQ=255) gATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGaa < 2:3515351/100‑1 (MQ=255) gATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGaa < 1:1562018/100‑1 (MQ=255) aTTTCTCCTTTATTACAGCGATA‑‑AAAAGTCTGGCTCATTATAGGGAAACAGACTTTTATTACCAACCGCAATTAATTGGCCAGAAACACATTATagg < 2:1878175/97‑1 (MQ=255) tttCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTTGCCAGCACCACATTATGGGaaaa > 2:1200510/1‑100 (MQ=255) ttCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAAc < 1:1650949/100‑1 (MQ=255) ctcCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAActc > 2:1311088/1‑100 (MQ=255) ccTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGCGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAActct > 2:2639594/1‑99 (MQ=255) ccTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTTGCCAGCACCACATTATGGGAAAACTCtt > 1:1442089/1‑100 (MQ=255) ccTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCtt > 1:3576712/1‑100 (MQ=255) ccTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCtt > 2:530241/1‑100 (MQ=255) ccTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCtt < 2:827823/100‑1 (MQ=255) cTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCttt < 1:2894660/100‑1 (MQ=255) tattaCAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAAcagatcgga > 1:2639276/1‑92 (MQ=255) tattaCAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTc > 2:1785390/1‑100 (MQ=255) tattaCAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTc > 1:2012023/1‑100 (MQ=255) tattaCAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTc < 2:3572828/100‑1 (MQ=255) attaCAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTca > 1:2331166/1‑100 (MQ=255) ttaCAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTcac < 2:1026852/100‑1 (MQ=255) aCAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAg < 2:36438/100‑1 (MQ=255) gCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGTCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTa < 2:1941524/99‑1 (MQ=255) gtaataaaaGTCTGGCTCCCTATAATGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTAtt > 1:2981655/6‑100 (MQ=25) gTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTg > 1:1420844/1‑100 (MQ=255) gTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTg < 1:519954/100‑1 (MQ=255) a‑‑aaaaGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCa > 2:283765/1‑100 (MQ=255) taaaaGTCTGGCTCCCTATAATGAGCCATGCTTTTATTAAGAACCGCAATTAATTGGTCAGGAACACATTATGGAAAAACACTTTTTTATAGTATTTgg > 2:2899543/2‑98 (MQ=16) aaaaGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCAt < 2:893719/100‑1 (MQ=255) aaaGTCTGGCTCCCTATAATGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCAtt > 1:981776/1‑100 (MQ=37) aaaGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCAtt > 2:3154951/1‑100 (MQ=255) aaGTCTGGCTCCCTATAATGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCAttt > 1:1985052/1‑100 (MQ=38) aaGTCTGGCTCCCTATAATGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCAttt > 1:224420/1‑100 (MQ=38) aGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCATTTg < 1:2319317/100‑1 (MQ=255) aGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCATTTg < 1:388827/100‑1 (MQ=255) aGTCTGGCTCATGATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCAtt < 2:3033535/98‑1 (MQ=255) tCTGGCTCATTATAGGGAGCCAGAGTTTTATTACCAACCGCAATTAATGGGCCAGCACCACATTAGGGGAAAACTCGTTTTCACAGTATTTGCATTTGAg < 2:2914120/100‑1 (MQ=255) cTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCATTTGAgc > 1:3173378/1‑100 (MQ=255) cTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCATTTGAgc > 1:2899157/1‑100 (MQ=255) ngCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCATTTGAgcgc > 1:3044509/2‑100 (MQ=255) gCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATGATGGGAAACCGCTTTTTCACAGTATTTGCATTTAAgcgc > 2:1578505/1‑99 (MQ=255) cATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCATTTGAGCGCGata < 2:2432314/100‑1 (MQ=255) aTTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGTCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCATTTGAGCGCGatat < 1:1578578/100‑1 (MQ=255) ttATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCATTTGAGCGCGATATc > 2:3230063/1‑100 (MQ=255) tataGGGAGCCAGACTTTTATTACCAACGCCAATTAATTGGCCAGCACAAAGTTATGGAATAACTCTCTTTCAACGTATTTGCATTTCACCGCGata > 2:1771620/1‑97 (MQ=255) taGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCATTTGAGCGCGATATCAtt > 1:1007539/1‑100 (MQ=255) taGGGAGCCAGACTTTTATGACAAAACGAAATTAATTGGCCAGCACCACATTATGGGAAAAGTCTTTTGCATAGTATTTGCATTTGAGCGGCATAGCAtt < 2:543967/100‑1 (MQ=255) aGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCATTTGAGCGCGATATCATTg < 1:933488/100‑1 (MQ=255) gggAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCATTTGAGCGCGATATCATTgg < 1:1998176/100‑1 (MQ=255) | TGTACGTAAGGACCGATAGCTGCCGGTGCATTTTCCGTCGCGATAGTTTTGCTCATGATTTCTCCTTTATTACAGCGGTA‑‑AAAAGTCTGGCTCATTATAGGGAGCCAGACTTTTATTACCAACCGCAATTAATTGGCCAGCACCACATTATGGGAAAACTCTTTTTCACAGTATTTGCATTTGAGCGCGATATCATTGG > NC_000913/4470858‑4471056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |