| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 401,542 | G→T | 76.8% | E53* (GAG→TAG) | iraP → | anti‑RssB factor, RpoS stabilzer during Pi starvation; anti‑adapter protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 401,542 | 0 | G | T | 76.8% | 266.5 / 91.9 | 139 | E53* (GAG→TAG) | iraP | anti‑RssB factor, RpoS stabilzer during Pi starvation; anti‑adapter protein |
| Reads supporting (aligned to +/- strand): ref base G (16/16); new base T (54/52); total (71/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.20e-01 | |||||||||||
Only 100 of 141 total aligned reads displayed.
AAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTC > NC_000913/401443‑401641 | aaaGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTag > 1:3334972/1‑100 (MQ=255) aaCTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAggg < 1:458245/100‑1 (MQ=255) aCTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAgggg < 2:486513/100‑1 (MQ=255) cTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAggggg > 1:1938533/1‑100 (MQ=255) tgtgtgCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGgc < 1:2799461/100‑1 (MQ=255) gtgtgCCCAGGTAGAATCTTTGGAGAGAATCGTCACTGCAATGCGTCGCAAGATGGCGCAAAATGACCAACAGCGGTGGATTGATCAGGTATAGGGGgc < 2:3084454/99‑1 (MQ=255) tgtgCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGgcgc < 1:2798240/100‑1 (MQ=255) gtgCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCt > 2:1296744/1‑100 (MQ=255) gtgCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCt > 1:732532/1‑100 (MQ=255) gcgcAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTACGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGt > 2:1990547/1‑100 (MQ=255) cgcAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGGAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTa < 2:2027133/100‑1 (MQ=255) cgcAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTa < 1:3205266/100‑1 (MQ=255) gcAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTAc < 1:1582665/100‑1 (MQ=255) cAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGCTCAGGTATAGCGGGCGCTGTACg > 2:1100923/1‑100 (MQ=255) ggTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAg < 1:2524508/100‑1 (MQ=255) ggTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAg > 2:2524492/1‑100 (MQ=255) ggTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGCACGAg < 2:1691310/100‑1 (MQ=255) gTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAgg < 1:929854/100‑1 (MQ=255) gTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAgg < 1:2534051/100‑1 (MQ=255) gTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAgg < 1:510288/100‑1 (MQ=255) tAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGt < 1:1200174/100‑1 (MQ=255) tAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGt < 1:889070/100‑1 (MQ=255) aGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTa > 1:1195238/1‑100 (MQ=255) ggtttGGAGATTATGGTCACTGCAATGCTTTACAATATGGCGTAAAATGACCAACAGGGGTTGGTAGGTCGGGTACATGGGGAGCTGTACGAGGTAAAGc > 2:912798/3‑100 (MQ=255) tttGGATCTTATTGTCACGGCAATGCTTCGCATTGTGGCGCATAATGTCCGACAGCGGTTGATTGATGAGGGATATGAGGCACTGTACGAGGTTAAGc < 2:3461718/98‑1 (MQ=255) tttGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGccc > 1:3432041/1‑100 (MQ=255) agaTTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGc > 1:1791014/1‑100 (MQ=255) naTTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGc > 1:2904121/2‑99 (MQ=255) ttATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAg < 1:1363602/100‑1 (MQ=255) cGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCAtt > 2:1424578/1‑100 (MQ=255) cGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCAtt > 2:1349712/1‑100 (MQ=255) cGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCAtt > 1:1334506/1‑100 (MQ=255) gTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCGGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTc > 2:2083023/1‑100 (MQ=255) tCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTcc < 2:2373148/100‑1 (MQ=255) cACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCt < 2:1867772/100‑1 (MQ=255) aCTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTg < 1:142272/100‑1 (MQ=255) aCTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTg < 1:1146098/100‑1 (MQ=255) cTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATATGGGGAGCTGTACGAGGTAAAGTCCGATGCCAGCATTCCTga > 2:3068467/1‑100 (MQ=255) gCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTgacg < 1:2299776/100‑1 (MQ=255) gCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTgacg > 1:2215110/1‑100 (MQ=255) gCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTgac > 1:2766420/1‑99 (MQ=255) aTGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGacgacg < 2:2656686/100‑1 (MQ=255) tGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGAcgacga < 1:1675373/100‑1 (MQ=255) gCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGAt > 1:2137805/1‑100 (MQ=255) gCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCAGATGCCAGCATTCCTGACGACGAt > 2:42919/1‑100 (MQ=255) cTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATa > 1:2333060/1‑100 (MQ=255) cTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATa > 1:218225/1‑100 (MQ=255) ttCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGGCAGCATTCCTGAAGACGATAc > 1:2388566/1‑100 (MQ=255) tCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCTATGCCAGCATTCCTGACGACGATACg < 2:2685870/100‑1 (MQ=255) tCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACg > 2:3182658/1‑100 (MQ=255) cGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCACGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACgg > 2:1987700/1‑100 (MQ=255) gCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGa > 2:2670810/1‑100 (MQ=255) cAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAg > 2:2971558/1‑100 (MQ=255) aaTATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAgc < 1:2615718/100‑1 (MQ=255) tatGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAgctg < 2:3203006/100‑1 (MQ=255) tatGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAgctg < 2:3369126/100‑1 (MQ=255) tGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAgctgct > 1:2233927/1‑100 (MQ=255) ngcgcAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGctgctg > 2:1143081/2‑100 (MQ=255) ggCGCAAAATGACCAACAGCTGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGctgctg < 2:1308646/100‑1 (MQ=255) ggCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGctgctg > 1:756571/1‑100 (MQ=255) ggCGCAAAATGACCAACAGCGGATGATTGATCAGGTAGAGGGGGCGCTGTACGAGTGAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAgctgc > 2:2121023/1‑98 (MQ=255) gcgcAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCtgctgc < 2:254852/100‑1 (MQ=255) cgcAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTgcg > 1:3051166/1‑100 (MQ=255) cAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGcgcg > 1:1920387/1‑100 (MQ=255) cAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGcgcg < 1:2246554/100‑1 (MQ=255) cAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGcgcg < 1:125654/100‑1 (MQ=255) cAAAATGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGcgcg < 1:125653/100‑1 (MQ=255) aTGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTa < 2:3381778/100‑1 (MQ=255) aTGACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTa > 1:2642995/1‑100 (MQ=255) aTGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTa < 2:2890115/100‑1 (MQ=255) gACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACg < 1:1098827/100‑1 (MQ=255) gACCAACAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACg < 1:3490303/100‑1 (MQ=255) ccAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTa > 2:912530/1‑100 (MQ=255) aaCAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTaaa < 1:2904775/100‑1 (MQ=255) aaCAGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTaaa < 1:355128/100‑1 (MQ=255) aaCAGCGGTTGAGTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTaaa > 1:2393624/1‑100 (MQ=255) aGCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAaagaa < 1:1211168/100‑1 (MQ=255) gCGGTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAaagaag < 2:656060/100‑1 (MQ=255) gCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAaagaag < 1:3067383/100‑1 (MQ=255) cGGTTGAGTGATCAGGTAGAGGGGACGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAaagaag < 2:87540/99‑1 (MQ=255) cGGGTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGt < 2:1428425/100‑1 (MQ=255) ggTTGATTGATCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGtt > 2:2354625/1‑100 (MQ=255) gTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTa < 2:2441870/100‑1 (MQ=255) ttgattgaTCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTAt < 2:1562299/100‑1 (MQ=255) gattgatCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTAtt > 2:2992477/1‑99 (MQ=255) gattgatCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTAtt > 2:1610199/1‑99 (MQ=255) gattgatCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTg > 1:922762/1‑100 (MQ=255) gattgatCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTg < 1:2260190/100‑1 (MQ=255) attgatCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGa > 1:105531/1‑100 (MQ=255) attgatCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGa < 1:3031533/100‑1 (MQ=255) ttgatCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGaa < 2:1791006/100‑1 (MQ=255) tgatTAGGTATAGGGGGCGTTGTACGAGGTAAAGTTTGATGATAGCATTCTTTACGACGATATGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAg < 2:884661/100‑1 (MQ=255) tgatCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAg < 1:1992523/100‑1 (MQ=255) gatCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGc > 1:1774663/1‑100 (MQ=255) atCAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCa > 2:28314/1‑100 (MQ=255) agcAGGTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGTGCGATTACGTAAAGAAGTTATTGAAGCa < 2:3331546/98‑1 (MQ=255) aGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATcc > 2:307723/1‑100 (MQ=255) gTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTc > 2:708201/1‑100 (MQ=255) gTATAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTc > 2:2068209/1‑100 (MQ=255) gagGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTc < 2:2215096/100‑1 (MQ=255) | AAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTC > NC_000913/401443‑401641 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |