| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 594,948 | G→C | 15.1% | Q166E (CAG→GAG) ‡ | cusR ← | response regulator in two‑component regulatory system with CusS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 594,948 | 0 | G | C | 15.1% | 400.2 / 54.8 | 145 | Q166E (CAG→GAG) | cusR | response regulator in two‑component regulatory system with CusS |
| Reads supporting (aligned to +/- strand): ref base G (58/64); new base C (5/17); total (63/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.64e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 146 total aligned reads displayed.
CAGCCGCTTCACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGCGGCTGACGAGATCGACCATCAA > NC_000913/594850‑595047 | gCCGCTTTACCGCCACATCAATATCATGGGTATCGCTGTCAAAATGCATGTCCCATACCTGCGTGGCGATAAGCGATC‑GGTGCAGCACGTCTCCCTGATg > 2:3273412/1‑100 (MQ=255) gCCGCTTCACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATg < 1:1716620/100‑1 (MQ=255) ccGCTTCACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATgg < 1:2315103/100‑1 (MQ=255) ccGCTTCACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATg < 2:1542171/99‑1 (MQ=255) cTTCACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATTTCCCATACCTGCGAGGCGATACGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCga > 2:2669487/1‑100 (MQ=255) cTTCACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCga > 2:1872925/1‑100 (MQ=255) ttCACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCgaa < 1:652945/100‑1 (MQ=255) ttCACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCgaa < 1:1872934/100‑1 (MQ=255) ttCACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCgaa < 1:2843367/100‑1 (MQ=255) tCACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCgaag < 2:1825274/100‑1 (MQ=255) tCACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCgaag < 1:1052848/100‑1 (MQ=255) tCACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCgaa < 2:3568826/99‑1 (MQ=255) cACCGCCACATCAATAGCATTGGTATCGCTGTCAGAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCATCAGGGCgaagt < 1:1731164/100‑2 (MQ=255) cACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCgaagg > 2:1773870/1‑100 (MQ=255) cACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCATCAGGGCgaagt < 2:2395815/100‑2 (MQ=255) cACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCATCAGGGCgaagt < 1:2768920/100‑2 (MQ=255) aCCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCATCAGGGCgaagtg < 2:1481211/100‑3 (MQ=255) aCCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCATCAGGGCgaagt < 2:1437025/99‑2 (MQ=255) ccGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGCGGGGGCAGCACTTCGCCATCAGGGCgaagtg < 1:724397/100‑3 (MQ=255) ccGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCgaaggaa > 1:3252589/1‑100 (MQ=255) ccGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCATCAGGGCgaagtgc < 1:3582855/100‑4 (MQ=255) cGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCgaaggaag < 1:1427869/100‑1 (MQ=255) cGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCATCAGGGCgaagtgct < 2:27454/100‑5 (MQ=255) cGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCATCAGGGCgaagtgct < 2:3237657/100‑5 (MQ=255) gCCACTTCAATAGCATTGGTAGCGCTGAATAAATTCAGTTGCCATACCTGCGAGGCGATAAGCGAGT‑GGGGCAGCACTTCGCCCTGATGGCGAAGgaaga < 2:2189393/100‑1 (MQ=255) ccACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCATCAGGGCgaagtgctgc < 2:2181987/100‑7 (MQ=255) cacaTCGATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAACACTTCGCCATCAGGGCgaagtgc < 2:1371292/96‑4 (MQ=255) cacaTCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAAc < 1:2979227/100‑1 (MQ=255) cacaTCAATAGCATTGATATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCATCAGGGCgaagtgctgcc < 2:2133913/100‑8 (MQ=38) acaTCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACt > 2:1823337/1‑100 (MQ=255) tCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGTGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGCAGGAAGAACTCca > 1:1611036/1‑100 (MQ=255) cAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCcag > 1:2211931/1‑100 (MQ=255) cAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCcag > 2:73807/1‑100 (MQ=255) cAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCcag < 2:165411/100‑1 (MQ=255) cAATAGCACTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGCAGGAAGAACTCcag > 2:7502/1‑100 (MQ=255) aTAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCcagca > 2:3490648/1‑100 (MQ=255) aTAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCcagca < 1:1371726/100‑1 (MQ=255) aGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCcagcag < 2:3174611/99‑1 (MQ=255) gCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCagag > 1:105943/1‑100 (MQ=255) aTTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTa > 1:1528896/1‑100 (MQ=255) tttgTATCGCAGTCAAAATGAATGTACCATACCTGCGAAGTGATAAGCTAGT‑GGTGCAGCACTTCGCCCTAATGGCAAAGGAAGATCTCcagc < 2:1274369/90‑1 (MQ=255) ggTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAAc < 1:2405210/100‑1 (MQ=255) gTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAAct < 1:78084/100‑1 (MQ=255) gTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAAct < 1:2539956/100‑1 (MQ=255) tCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCtt < 1:818180/100‑1 (MQ=255) tCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCtt < 1:2887711/100‑1 (MQ=255) cTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTAc < 2:1925789/100‑1 (MQ=255) tGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACt > 2:892556/1‑100 (MQ=255) tCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTgg < 1:1892301/100‑1 (MQ=255) cAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGt < 2:2148624/100‑1 (MQ=255) cAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGt > 2:1884002/1‑100 (MQ=255) cAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGt < 2:1113026/100‑1 (MQ=255) aaaaTTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTc > 1:917798/1‑100 (MQ=255) aaaaTTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTc > 2:2566694/1‑100 (MQ=255) aaaTTCATGTCCCATACCTGCGAGGCGCTAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAGGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCa > 2:894629/1‑100 (MQ=255) aaaTTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCa < 2:1741109/100‑1 (MQ=255) cATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGt < 2:661510/99‑1 (MQ=255) cATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTg > 1:1200553/1‑100 (MQ=255) aTGTCCCATGCCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGa < 2:2058705/100‑1 (MQ=255) aTGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGa < 2:2712229/100‑1 (MQ=255) gTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATg < 1:1021563/100‑1 (MQ=255) gTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATg > 2:2125251/1‑100 (MQ=255) cccATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATgcg < 1:3289403/100‑1 (MQ=255) cATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGcgcg > 2:2312397/1‑100 (MQ=255) cATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGcgcg < 1:1776942/100‑1 (MQ=255) tACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTg < 2:487068/100‑1 (MQ=255) tACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTg > 1:668262/1‑100 (MQ=255) tACCTCCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTg < 2:1671502/100‑1 (MQ=255) ccTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGcc < 1:2592717/100‑1 (MQ=255) cTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCg > 1:735377/1‑100 (MQ=255) tGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGc > 1:2414457/1‑100 (MQ=255) gCGAGGCGATAAGCGAGC‑GGTGCAGCACTACGCCCTGATGGCGAAGGGAGAACTCCAGCAGAGTAAACTCTCTACTGGTCAAAGTGATGCGCGTCCCGCt > 2:2791108/1‑100 (MQ=255) cGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTg < 2:2473973/100‑1 (MQ=255) cGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTg > 1:3210436/1‑100 (MQ=255) gAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGc < 2:3252565/100‑1 (MQ=255) ggCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTGACTGGTCAAAGTGATGCGCGTGCCGCTGCgg > 1:2813435/1‑100 (MQ=255) gCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCggg < 2:534561/100‑1 (MQ=255) gATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTg < 1:3028885/100‑1 (MQ=255) tAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGAc > 2:1504150/1‑100 (MQ=255) agcgagc‑gGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACtt > 1:1338929/1‑100 (MQ=255) gcgagc‑gGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACttt > 2:3127591/1‑100 (MQ=255) gcgagc‑gGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACttt > 2:114402/1‑100 (MQ=255) gagc‑gGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCTAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGc < 2:2683793/100‑1 (MQ=255) gagc‑gGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGc > 1:2235129/1‑100 (MQ=255) gagc‑gGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGc < 1:653964/100‑1 (MQ=255) c‑gGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGCgg < 1:2892182/99‑1 (MQ=255) ggggCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGCGGCt < 2:14702/100‑1 (MQ=255) gggCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGCGGCTg > 1:3608678/1‑100 (MQ=255) ggCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGCGGCTGa > 2:611155/1‑100 (MQ=255) ttcttccTTCGCCATCAGGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGCGGCTg > 2:3522917/7‑98 (MQ=38) gcagcaCTTCTCCCTGATGGCGAAGGAAGAACGCCAGCAGAGTAAACTCTTTACTGCTCAAAGTGATGCGCGTGCCTCTGCGGGTGACTTTGCAGc < 2:3392199/96‑1 (MQ=255) ttccTTCGCCATCAGGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGCGGCTGACgag > 1:1263102/4‑100 (MQ=255) ttccTTCGCCATCAGGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGCGGCTGACgag > 1:3193825/4‑100 (MQ=255) gcaCTTCGCCCTGATGGCGACGGAAGAACTCCAGCAGAGTAACCTCTTTACTGGTCAAAGTGCTGCGCGTGCCGCTGCGGGCGACTCTGCGGc > 2:546778/1‑93 (MQ=255) tccTTCGCCATCAGGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGTGTGACTTTGCGGCTGACgaga > 1:943726/3‑100 (MQ=255) cGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGCGGCTGACGAGATCGAc > 2:2141072/1‑100 (MQ=255) gCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGCGGCTGACGAGATCGAcc < 1:141412/100‑1 (MQ=255) cTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGCGGCTGACGAGATCGACCATc < 1:2305976/100‑1 (MQ=255) cTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGCGGCTGACGAGACCGACCAt > 2:3148444/1‑99 (MQ=255) tGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGCGGCTGACGAGATCGACCATCa < 2:31096/100‑1 (MQ=255) | CAGCCGCTTCACCGCCACATCAATAGCATTGGTATCGCTGTCAAAATTCATGTCCCATACCTGCGAGGCGATAAGCGAGC‑GGGGCAGCACTTCGCCCTGATGGCGAAGGAAGAACTCCAGCAGAGTAAACTCTTTACTGGTCAAAGTGATGCGCGTGCCGCTGCGGGTGACTTTGCGGCTGACGAGATCGACCATCAA > NC_000913/594850‑595047 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |