Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 824,572 T→A 17.0% intergenic (‑75/‑58) ybhP ← / → ybhQ endo/exonuclease/phosphatase family protein/inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913824,5720TA17.0% 337.9 / 61.8 142intergenic (‑75/‑58)ybhP/ybhQendo/exonuclease/phosphatase family protein/inner membrane protein
Reads supporting (aligned to +/- strand):  ref base T (64/53);  new base A (9/15);  total (73/69)
Fisher's exact test for biased strand distribution p-value = 1.78e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.10e-01

Only 100 of 144 total aligned reads displayed.

AAAATTGTTGTGTTTGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCAACGGGTCTAAGT  >  NC_000913/824473‑824671
                                                                                                   |                                                                                                   
aaaaTTGTTGTGTTTGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAAt                                                                                                     <  1:515463/100‑1 (MQ=255)
      gttgtGTTTGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATGGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAAAATTCCg                                                                                               >  2:957433/1‑100 (MQ=255)
      gttgtGTTTGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCg                                                                                               <  2:1459942/100‑1 (MQ=255)
          tgtTTGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATGGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAAAATTCCGTaag                                                                                           <  1:957440/100‑2 (MQ=255)
          tgtTTGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAAAATTCCGTaag                                                                                           <  1:137049/100‑2 (MQ=255)
          tgtTTGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAAAATTCCGTaag                                                                                           <  1:2746571/100‑2 (MQ=255)
          tgtTTGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAAAATTCCGTaag                                                                                           <  1:1850624/100‑2 (MQ=255)
           gtTTGATCGGTGATAATTTTCCTTCCTTTGCTTTTTATGTCATTGAAATATTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAg                                                                                          <  2:2428041/100‑1 (MQ=255)
           gtTTGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAg                                                                                          <  1:80168/100‑1 (MQ=255)
            tttGATCGGGCATAATTTTCCTTTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAAAATTCCGTaaga                                                                                          <  2:151323/99‑3 (MQ=255)
            tttGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGTCGTCACAAAAAGGTGCGGTCTTACGGAAAATTCCGTaagac                                                                                         <  2:1722073/100‑4 (MQ=255)
            tttGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAAAATTCCGTaagac                                                                                         <  2:2856392/100‑4 (MQ=255)
            tttGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAAAATTCCGTaagac                                                                                         <  1:1815947/100‑4 (MQ=255)
            tttGATCGGGCATAATTATCCTGTCTTTGCCGCTTATCTCATTGCAATAGTGTAATCGGCGGCACAAAAAGGTGCGGGCTTACGGAAAATTCCGTaag                                                                                           <  2:438146/98‑2 (MQ=255)
             ttGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAAAATTCCGTaagacc                                                                                        <  1:2106476/100‑5 (MQ=255)
             ttGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAAAATTCCGTaagacc                                                                                        <  1:3436341/100‑5 (MQ=255)
             ttGATCGGGCATAATTTTCCTGTCTTTGCATCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAAAATTCCGTaagac                                                                                         <  2:1653635/99‑4 (MQ=255)
              tGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTc                                                                                       <  1:1257662/100‑1 (MQ=255)
              tGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAAAATTCCGTaagaccg                                                                                       <  1:2084894/100‑6 (MQ=255)
               gATCGGGCATAATCTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCg                                                                                      >  1:2447966/1‑100 (MQ=255)
                aTCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCgg                                                                                     <  1:2946104/100‑1 (MQ=255)
                 tCGGGCATAATTTTCCTGTCTTAGCGTCTTATCTCATTGAAATAGTGTAGTAAGAGAAAAAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGt                                                                                    <  2:1280644/100‑1 (MQ=255)
                  cGGGCATAATTTTCCTGTCATTGCCTCTTATCTCATTGAAATAGTGTAAACAAAAAAAAAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTa                                                                                   <  2:3265585/100‑1 (MQ=255)
                    ggCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTAct                                                                                 >  2:562830/1‑100 (MQ=255)
                      cATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTActct                                                                               >  1:2879261/1‑100 (MQ=255)
                       aTAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTg                                                                              <  2:550063/100‑1 (MQ=255)
                        tAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGa                                                                             >  1:1356059/1‑100 (MQ=255)
                          aTTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGagt                                                                           >  1:964123/1‑100 (MQ=255)
                          aTTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGagt                                                                           <  1:2628478/100‑1 (MQ=255)
                          aTTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGagt                                                                           <  1:1597366/100‑1 (MQ=255)
                             tttcTGTCTTTGCCTCTTACCGCATTGAAATAGTGTAGTCGGCGTCACAAAATGGTGCGGTCTTACGGAATTTTCTGTAAAGTTGGGTACTATGagt                                                                           <  2:1997/94‑1 (MQ=255)
                                    cTTTGCCTCTTATCTCAATGAAATAGTGTAGTCGGCGTAACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTTTGAGTAAGTAGAGAt                                                                 >  2:744732/1‑100 (MQ=255)
                                       tGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATaaa                                                              >  2:2982771/1‑100 (MQ=255)
                                        gCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAAt                                                             <  2:101456/100‑1 (MQ=255)
                                         ccTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAAtt                                                            >  1:3610190/1‑100 (MQ=255)
                                              tATCTCATTGATATAGTGTAGTCGGCTTCACATAAAGTTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCa                                                       <  2:3062442/100‑1 (MQ=255)
                                              tATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCa                                                       <  1:570811/100‑1 (MQ=255)
                                               aTCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAg                                                      >  1:863601/1‑100 (MQ=255)
                                               aTCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGAGCGGTATAACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAg                                                      >  2:2571921/1‑100 (MQ=255)
                                                tctcATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAgg                                                     >  2:1063848/1‑100 (MQ=255)
                                                 ctcATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGga                                                    >  1:1767320/1‑100 (MQ=255)
                                                   cATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGgaga                                                  >  1:1623433/1‑100 (MQ=255)
                                                   cATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGgaga                                                  >  2:1958408/1‑100 (MQ=255)
                                                   cATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGgag                                                   <  2:1710953/99‑1 (MQ=255)
                                                    aTTGAAATAGTGTAGTCGGCGTCACAAAACGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGgagag                                                 >  1:2533903/1‑100 (MQ=255)
                                                    aTTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGgagag                                                 <  1:2893326/100‑1 (MQ=255)
                                                     ttGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGgagag                                                 >  2:1221552/1‑99 (MQ=255)
                                                      tGAAGTAGTGAAGTGGGCGTCACAAAACGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTTCTCTGAGTAAGTAGAGATAAATTCTTCAGgagaga                                                <  2:1659971/99‑1 (MQ=255)
                                                       gAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAg                                              <  2:1279262/100‑1 (MQ=255)
                                                       gAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAg                                              <  1:2706939/100‑1 (MQ=255)
                                                       gAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAg                                              >  1:2313347/1‑100 (MQ=255)
                                                         aaTAGTGTAGTCGGCGGCACAAAAAGGTGCGGTCTTAAGGAATTTTCAGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGc                                             <  2:2613989/99‑1 (MQ=255)
                                                           tAGTGTAGTTTGCGTCACAAAAAGGTTCGGTCTTACTGAATTTTCCGGAAAGTTCGGTACTCTGTGGAATTAGAGATAAATTCTTCAGGAGAGAAGCCAt                                          <  2:3460906/100‑1 (MQ=255)
                                                            cgtgtAGTCGGCGTCACAAAAAGGTGCGGTCTTAAGGAATTTTACGTAAAGTTAGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATg                                         >  2:938541/2‑100 (MQ=255)
                                                            aGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATg                                         <  1:602772/100‑1 (MQ=255)
                                                            aGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATg                                         >  2:3536911/1‑100 (MQ=255)
                                                             gtgtAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGa                                        >  1:960194/1‑100 (MQ=255)
                                                                 aGTCGGCGTCAGAAAAAGGTGCTGTCTGACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGCGATAAATTCTTCAGGAGAGAAGCCATGAAGTg                                    <  2:523288/100‑1 (MQ=255)
                                                                 aGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTg                                    >  1:2169355/1‑100 (MQ=255)
                                                                  gTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTgg                                   <  2:1064314/100‑1 (MQ=255)
                                                                  gTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTgg                                   >  2:2656038/1‑100 (MQ=255)
                                                                  gTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTgg                                   >  1:3001242/1‑100 (MQ=255)
                                                                  gTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTgg                                   >  1:3000992/1‑100 (MQ=255)
                                                                  gTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTgg                                   >  2:2479707/1‑100 (MQ=255)
                                                                  gTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTgg                                   >  1:190162/1‑100 (MQ=255)
                                                                   tCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGc                                  <  1:1699796/100‑1 (MQ=255)
                                                                     ggCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGcaa                                >  1:992821/1‑100 (MQ=255)
                                                                       cGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGcaaca                              <  1:103337/100‑1 (MQ=255)
                                                                         tCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCaacaac                            >  2:3611867/1‑100 (MQ=255)
                                                                          cacaAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGTGAAGCCATGAAGTGGCaacaac                            <  2:2119344/99‑1 (MQ=255)
                                                                          cacaAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACg                           >  2:1606951/1‑100 (MQ=255)
                                                                           acaAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACgt                          >  1:2998903/1‑100 (MQ=255)
                                                                            caAAAAGGTGCGGTCTTACGGAATTTTTTTTTTTTTTTTGTACTCTGAGTAAGTAGAGATAAATTCTTCTGTAGGGATGCTATGAAGTGGCAACATCgt                          >  2:2687901/1‑99 (MQ=255)
                                                                            caAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTTAGAAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACgtg                         >  2:2017557/1‑100 (MQ=255)
                                                                            caAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACgtg                         >  1:1960854/1‑100 (MQ=255)
                                                                             aaaaaGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACgtgt                        <  2:960187/100‑1 (MQ=255)
                                                                               aaaGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTc                      >  2:3364895/1‑100 (MQ=255)
                                                                                aaGGTGCGGTCTTACGGAATTTTCCGTAAAGTACGGTACTCTGAGTAAGTAGAGATAAATTCTGCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCg                     <  2:3327566/100‑1 (MQ=255)
                                                                                  gttttggTCTTATGAAAGTTTCCGTAAAGTTGCGTACTCTGAGTAATTATAAATAACTTCTTCATTAGAGAAGCCATGAAGTGCCAACAACg                           <  2:2925601/87‑1 (MQ=255)
                                                                                    ccgaactttACGGAAAATTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTc                 >  2:943467/8‑100 (MQ=255)
                                                                                    ccgaactttACGGAAAATTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTc                 >  2:1248776/8‑100 (MQ=255)
                                                                                    ccgaactttACGGAAAATTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTc                 >  1:319845/8‑100 (MQ=255)
                                                                                     cgaactttACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCg                <  1:1343176/94‑1 (MQ=255)
                                                                                      cGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGc               >  2:1912544/1‑100 (MQ=255)
                                                                                       ggTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCa              <  2:2902388/100‑1 (MQ=255)
                                                                                       ggTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCa              <  1:3323378/100‑1 (MQ=255)
                                                                                       ggTCTTACGGAATTGTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACGACGTGTTCGTGTc                 <  1:2479723/97‑1 (MQ=255)
                                                                                        gTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCaa             >  1:3534435/1‑100 (MQ=255)
                                                                                        actttACGGAAAATTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCaa             >  1:2672772/4‑100 (MQ=255)
                                                                                         tCTTACGGAATTTTCCGTAAAGTTCGGTACTCTTAGTAAGTAGAGTTAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCAAc            >  2:421396/1‑100 (MQ=255)
                                                                                         ctttACGGAAAATTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCAAc            >  1:1454445/3‑100 (MQ=255)
                                                                                         ctttACGGAAAATTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCAAc            >  1:1241764/3‑100 (MQ=255)
                                                                                          cTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCAACg           >  1:604312/1‑100 (MQ=255)
                                                                                            tACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCAACggg         <  2:915782/100‑1 (MQ=255)
                                                                                            tACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCAACggg         <  2:2829654/100‑1 (MQ=255)
                                                                                             aCGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCAACGGGt        >  1:2800740/1‑100 (MQ=255)
                                                                                              cGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCAACGGGTc       <  2:3602866/100‑1 (MQ=255)
                                                                                                gAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCAACGGGTCTa     <  1:2163795/100‑1 (MQ=255)
                                                                                                gAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCAACGGGTCTa     <  2:3019447/100‑1 (MQ=255)
                                                                                                   ttttCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCAACGGGTCTAAGt  >  1:2979606/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AAAATTGTTGTGTTTGATCGGGCATAATTTTCCTGTCTTTGCCTCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAGTAAGTAGAGATAAATTCTTCAGGAGAGAAGCCATGAAGTGGCAACAACGTGTTCGTGTCGCAACGGGTCTAAGT  >  NC_000913/824473‑824671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: