| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,187,090 | G→C | 17.4% | intergenic (+20/+29) | pepT → / ← roxA | peptidase T/50S ribosomal protein L16 arginine hydroxylase; 2‑oxoglutarate oxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,187,090 | 0 | G | C | 17.4% | 425.7 / 80.1 | 171 | intergenic (+20/+29) | pepT/roxA | peptidase T/50S ribosomal protein L16 arginine hydroxylase; 2‑oxoglutarate oxygenase |
| Reads supporting (aligned to +/- strand): ref base G (77/64); new base C (12/18); total (89/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.15e-01 | |||||||||||
Only 100 of 177 total aligned reads displayed.
TTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCC > NC_000913/1186993‑1187188 | tttGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtgtg < 1:2744580/100‑1 (MQ=255) ttGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGa > 1:113602/1‑100 (MQ=255) tgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTACGCGAAAAGGTATTCAGCATGTGATGc > 2:3222289/1‑100 (MQ=255) tgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGc > 2:3019372/1‑100 (MQ=255) tgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGc > 1:2093532/1‑100 (MQ=255) tgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGc > 1:2073419/1‑100 (MQ=255) tgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGc < 1:2923292/100‑1 (MQ=255) tgAATCTGGAAGGTATGGAAAAAGCGGTGCAGCTGATCGTCCGTATTGCCAACTTAACCGCGCAACGGAAGTAAGCGCAAAGGGATGCGGCATGTGATGc < 1:907574/100‑1 (MQ=255) gACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGcc > 1:1900633/1‑100 (MQ=255) ctctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAACGAAAAGCAATGCGGCATGTGATGcc > 2:3437143/1‑98 (MQ=255) ctctGGAAGGGATGGAAAAAGCGGTGCAGGTGATCGGCCGGATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGcc < 1:1113751/98‑1 (MQ=255) ctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCAt > 1:1561452/1‑100 (MQ=255) tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGcgt > 2:3642047/1‑97 (MQ=255) tGGAAGGCATGAAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGGAAGCGAAAAGGGATGCGGCATGTGATGCCGCATc > 2:1909795/1‑100 (MQ=255) ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATcc > 1:721597/1‑100 (MQ=255) ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATcc > 1:677505/1‑100 (MQ=255) ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATcc < 1:645418/100‑1 (MQ=255) ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATc < 2:220162/99‑1 (MQ=255) ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATcc < 1:2996876/100‑1 (MQ=255) ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATcc < 1:2821742/100‑1 (MQ=255) ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATcc < 1:491919/100‑1 (MQ=255) ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATcc < 1:2336962/100‑1 (MQ=255) ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATcc < 1:1858408/100‑1 (MQ=255) ggaGGTATGGAAAAAGAGGTTGAGGGGGTCGGCAGGATTTCCGAGTTAACGGCGCAACGGAAGTAAGCGAAGAGGGATGCGGCATCACATGCCGCAtn < 2:2426558/96‑2 (MQ=255) gAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATccc < 1:14486/100‑2 (MQ=39) gAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATccc < 1:2875839/100‑2 (MQ=39) gTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGGGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCtt < 2:45714/100‑1 (MQ=255) tATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTa < 2:1561444/100‑1 (MQ=255) aTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTaa < 1:3140650/100‑1 (MQ=255) aTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTaa < 1:1820448/100‑1 (MQ=255) aTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATcccttttcg < 2:13951/100‑8 (MQ=37) ggAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAAt > 2:12310/1‑100 (MQ=255) ggAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATcccttttcgct < 1:3394696/100‑10 (MQ=37) ggAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGAAAGAAAGAGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAAt < 2:569548/100‑1 (MQ=255) gAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATc > 2:2795153/1‑100 (MQ=255) aaaaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCa < 2:1117161/100‑1 (MQ=255) aaaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAAGCCaa < 2:313473/100‑1 (MQ=255) aGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAAc > 2:1528073/1‑100 (MQ=255) gCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACt > 2:659207/1‑100 (MQ=255) gCGGTGCAGGTGATCGTCCGTATTGCAGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATGCGGCGTAAATCCAAACt > 1:2221440/1‑100 (MQ=255) ggTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTa > 1:1927665/1‑100 (MQ=255) tGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAcc > 2:3587416/1‑100 (MQ=255) tGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAcc < 2:1864549/100‑1 (MQ=255) gCAGGTGATCGTCAGTATTGCGGAGTTAACGGCGCAAAAAAAAAAAAAAAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACt < 2:965713/95‑1 (MQ=255) ggTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTc < 1:484291/100‑1 (MQ=255) tGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCga < 2:2826073/100‑1 (MQ=255) tCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCgaaga < 1:542316/100‑1 (MQ=255) tCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAcc < 2:2423302/100‑1 (MQ=255) ccGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAActa < 1:2467029/100‑3 (MQ=255) cGTATTGACGAGTGAACGGCGCAACGGAAGGAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAAGCCAAACTTACCCTTCGAAGAAcc < 2:3506401/98‑1 (MQ=255) gTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAAt > 1:3543218/1‑100 (MQ=255) tATTTCCGAGTTAACGGCGCAACGGAACTAAGCGAAAAGGTATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATa < 2:3357817/100‑1 (MQ=255) tATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAATGGATTCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCTTTCGATGAACCAAt > 2:1700/1‑99 (MQ=255) tGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATAccc > 1:2556657/1‑100 (MQ=255) tGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATAcc < 2:2363589/99‑1 (MQ=255) gCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCg > 1:1699365/1‑100 (MQ=255) ccGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGc > 2:3355436/1‑100 (MQ=255) ccGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGc < 1:281977/100‑1 (MQ=255) ccGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGc < 1:898120/100‑1 (MQ=255) ccGAGTTAACGGCGCAACGGAAGCAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGc < 1:2126724/100‑1 (MQ=255) cGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTGAAATCCAAACCTACCCTTCGAAGAACCAATACCCGCt > 2:3143043/1‑100 (MQ=255) gAGTTAACGGCGCACCGGCAGTAATCGAAAAGAGATTCGCCATCTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCTAAGAACCTATACCCGCt < 2:2936557/99‑1 (MQ=255) gAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCg < 2:418977/97‑1 (MQ=255) gAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTa > 1:3301874/1‑100 (MQ=255) aGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTAt > 1:1329819/1‑100 (MQ=255) tAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGa > 2:2332832/1‑100 (MQ=255) tAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGa > 2:2625494/1‑100 (MQ=255) aaCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAc > 2:1526704/1‑100 (MQ=255) aaCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAc > 1:2017762/1‑100 (MQ=255) aCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAcc < 1:1081413/100‑1 (MQ=255) aCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAcc < 1:2257456/100‑1 (MQ=255) cGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAcc > 2:208976/1‑99 (MQ=255) cGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCa < 1:2117498/100‑1 (MQ=255) ggCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAg > 1:2845954/1‑100 (MQ=255) cAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGcgcc > 1:761376/1‑100 (MQ=255) ggAAGTAAGCGAAAAAGGATGCGGCATGTGATGCCGCATCCGACTTAAATCCAAACTTACACTTCAAAGAACCAATACCCGCTATTGACCACcaccgcaa > 2:1799232/1‑98 (MQ=255) gAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAg < 2:3328299/100‑1 (MQ=255) gAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAg > 1:2503199/1‑100 (MQ=255) gAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAAGCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAg > 2:1753128/1‑100 (MQ=255) aaataaaaaaaaaGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAg < 2:2638247/90‑1 (MQ=255) tAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATc > 1:173256/1‑100 (MQ=255) aGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATcgc < 1:3619089/100‑1 (MQ=255) gAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAg > 1:1806278/1‑100 (MQ=255) gAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAg < 2:3317086/100‑1 (MQ=255) aaaaGGGATGCGGCATGTGATGCCACATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAgg < 1:3093100/100‑1 (MQ=255) gccggATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGaa > 1:2243189/4‑100 (MQ=255) gccggATGCGGCATCACATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGaa > 1:70909/4‑100 (MQ=38) ccggACGCGGCATCACATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACAAGCGCCGCGAGCATCGCGAGGAAt > 2:2695512/3‑100 (MQ=255) cggATGCGGCATCACATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATg > 2:555396/2‑100 (MQ=39) ggATGCGGCATCACATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAAtaa > 2:1227048/1‑98 (MQ=255) aTGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACg < 1:3355461/100‑1 (MQ=255) aTGCGGCATGTGATGCCGCACCCGGCTTAAATCCAAGCTTACCCTTCGAAGAACCAATACCCGCGATTGACCAGCGCCGCGAGCATCGCGAGGAATGACg < 1:2553432/100‑1 (MQ=255) tGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACgg > 1:20389/1‑100 (MQ=255) tGCGGCATGTGATACCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACgg > 2:2253696/1‑100 (MQ=255) ggCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATc < 1:2713357/100‑1 (MQ=255) ggCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATc > 2:824813/1‑100 (MQ=255) aTGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTc > 1:2148050/1‑100 (MQ=255) tgtgATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTcc > 1:875516/1‑100 (MQ=255) tgtgATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTcc > 2:1010946/1‑100 (MQ=255) tgtgATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTcc < 2:1329811/100‑1 (MQ=255) | TTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCC > NC_000913/1186993‑1187188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |