New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	253340 =	109 (1.270)	8 (0.140) +GAAAAATTGCGTGCTCTAAAAGCGCGCTGAAACA	6/130	8.0	11.0%	intergenic (+179/‑139)	yafP/ykfJ	GNAT family putative N‑acetyltransferase/pseudogene
	?	NC_000913	= 3071450	89 (1.030)					intergenic (‑206/+9)	fbaA/pgk	fructose‑bisphosphate aldolase, class II/phosphoglycerate kinase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

ATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/253385‑253340 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGGCAGGGAAACCTGCCCTTGTTTCAGCGCG  <  NC_000913/3071450‑3071419                                               ||||||||||||||||||||||||||||||||||                                 ATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTCTAAAAGCGCGCTGAAACAAGGGCAGGGAAACCTGCCCT              <  1:1189237/100‑1   TCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTCTAAAAGCGCGCTGAAACAAGGGCAGGGAAACCTGCCCTTG            <  1:2120651/100‑1   TCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTCTAAAAGCGCGCTGAAACAAGGGCAGGGAAACCTGCCCTTG            <  2:1862868/100‑1      ctctCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTCTAAAAGCGCGCTGAAACAAGGGCAGGGAAACCTGCCCTTGTT          <  2:1786320/95‑1       tctCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTCTAAAAGCGCGCTGAAACAAGGGCAGGGAAACCTGCCCTTGTTTC        <  1:1592102/97‑1         tCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTCTAAAAGCGCGCTGAAACAAGGGCAGGGAAACCTGCCCTTGTTTCAG      <  2:1751904/99‑1             GTCGCCTTCCTGCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTTTAAAAGCGCGCTGAAACAAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCG  <  1:921944/100‑1             GTCGCCTTCCTGCAACTCGAATTATTTAGAGTATGAAAAATTGCGTGCTCTAAAAGCGCGCTGAAACAAGGGCAGGGAAACCTGCCCTTGTTTCAGCGCG  <  1:922033/100‑1                                               ||||||||||||||||||||||||||||||||||                                 ATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/253385‑253340 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGGCAGGGAAACCTGCCCTTGTTTCAGCGCG  <  NC_000913/3071450‑3071419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.