| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1755631 = | 101 (0.640) | 16 (0.110) | 7/166 | NT | 15.8% | intergenic (‑490/‑67) | ydhZ/pykF | uncharacterized protein/pyruvate kinase I |
| ? | NC_000913 | 1755657 = | 76 (0.520) | intergenic (‑516/‑41) | ydhZ/pykF | uncharacterized protein/pyruvate kinase I | |||||
TTCGGTCCGATGGTGCAAACAATTTTGGTCTTTTTCATGACAGTCTTAGTCTTTAAGTTGAGAAGGATGGGAGAAACTTGCTTTCTGGGCGCACTGCCGGAAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1755735‑1755631‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaagcAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGT > NC_000913/1755657‑1755755 TTCGGTCCGATGGTGCAAACAATTTTGGTCTTTTTCATGACAGTCTTAGTCTTTAAGTTGAGAAGGATGGGAGAAACTTGCTTTCTGGGCGCACTGCCGG < 2:1073656/100‑1 TCGGTCCGATGGTGCAAACAATTTTGGTCTTTTTCATGACAGTCTTAGTCTTTAAGTTGAGAAGGATGGGAGAAACTTGCTTTCTGGGCGCACTGCCGGA > 2:3204949/1‑100 TCGGTCCGATGGTGCAAACAATTTTGGTCTTTTTCATGACAGTCTTAGTCTTTAAGTTGAGAAGGATGGGAGAAACTTGCTTTCTGGGCGCACTGCCGGA < 2:432420/100‑1 GGTCCGATGGTGCAAACAATTTTGGTCTTTTTCATGACAGTCTTAGTCTTTAAGTTGAGAAGGATGGGAGAAACTTGCTTTCTGGGCGCACTGCCGGAAA > 1:2248747/1‑100 GTCCGATGGTGCAAACAATTTTGGTCTTTTTCATGACAGTCTTAGTCTTTAAGTTGAGAAGGATGGGAGAAACTTGCTTTCTGGGCGCACTGCCGGAAAG < 2:2330476/100‑1 GTCCGATGGTGCAAACAATTTTGGTCTTTTTCATGACAGTCTTAGTCTTTAAGTTGAGAAGGATGGGAGAAACTTGCTTTCTGGGCGCACTGCCGGAAAG > 2:2261133/1‑100 TCCGATGGTGCAAACAATTTTGGTCTTTTTCATGACAGTCTTAGTCTTTAAGTTGAGTAGGATGGGAGTAACTTGCTTTCTGGGCGTACTGCCGGAAAtc < 2:2968205/100‑3 GGAGAAACTTGCTTTCTGGGCGCACTGCCGGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTG > 2:2598277/1‑100 ACTTGCTTTCTGGGCGCACTGCCGGAAAGCACGTTTCCCCCATCCTTCTCAACTTAAAGACTAAGCCTGTCATAAAAAAGACCAAAATTTTTTTCACCAT > 1:957167/1‑100 CTTGCTTTCTGGGCGCACTGCCGGAAAGCAAGTTTCTCCCATCCTTCTCAACTTACAGACTAAGACTGTCAGTACAAAGACCAAAATTGTTTGCACCA > 1:42759/1‑98 CTTGCTTTCTGGGCGCACTGCCGGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATC > 2:2036672/1‑100 CTTGCTTTCTGGGCGCACTGCCGGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATC > 1:2778747/1‑100 CTTGCTTTCTGGGCGCACTGCCGGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATC > 2:4163807/1‑100 CTTGCTTTCTGGGCGCACTGCCGGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCAT > 2:1673445/1‑99 CTTGCTTTCTGGGCGCACTGCCGGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCAT > 1:3589411/1‑99 CTTGCTTTCTGGGCGCACTGCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAACGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCAT > 1:2915649/1‑99 TTGCTTTCTGGGCGCACTGCCGGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCG > 1:3803622/1‑100 TTGCTTTCTGGGCGCACTGCCGGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCG > 1:1982321/1‑100 TTGCTTTCTGGGCGCACTGCCGGAAAGCAAGTTTCTACCATCCTTCTCAACTTAAAGACTAAGACTGTCATGACAAAGACCAACATTGTTTGCACCATCG > 2:1884376/1‑100 TGCTTTCTGGGCGCACTGCCGGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGG > 1:230831/1‑100 GCTTTCTGGGCGCACTGCCGGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGA > 2:486924/1‑100 GCTTTCTGGGCGCACTGCCGGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGG > 1:2511376/1‑99 TGGGCGCACTGCCGGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAA > 1:2174834/1‑100 AAGCAAGTTTCTCGCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCAACGGACCGAAAACCGAATCTGAAGAGA > 2:2958138/1‑100 GCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATG > 1:4023080/1‑100 GCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATG < 2:710706/100‑1 CAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGT > 2:2401527/1‑100 TTCGGTCCGATGGTGCAAACAATTTTGGTCTTTTTCATGACAGTCTTAGTCTTTAAGTTGAGAAGGATGGGAGAAACTTGCTTTCTGGGCGCACTGCCGGAAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1755735‑1755631‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaagcAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGT > NC_000913/1755657‑1755755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |