| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2900520 = | 138 (0.870) | 21 (0.150) | 11/156 | NT | 15.1% | intergenic (‑247/‑72) | ygcW/yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein |
| ? | NC_000913 | 2900560 = | 116 (0.840) | intergenic (‑287/‑32) | ygcW/yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein | |||||
GCGAGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2900629‑2900520‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttacttttctcTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTT > NC_000913/2900560‑2900658 GCGAGGGTTATACAACGGCGATATGCGTTGTATTGCATATCGTATTCCCATTTGTAAAAAAAAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGAT < 1:659673/100‑1 CGAGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATT > 2:3359199/1‑100 CGAGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGAT < 2:2606943/99‑1 GGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACT > 1:75181/1‑100 GGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGAT < 2:2084323/96‑1 GGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTT > 1:1561963/1‑100 GGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTT > 2:1169850/1‑100 GGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTT > 1:4064595/1‑100 GTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTT > 2:544410/1‑100 GTTATCCAACGGCGATATGAGTTGTGTTGAAAATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTT < 1:3245529/99‑1 TTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTT > 2:528310/1‑100 TATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTT > 2:332327/1‑99 atccaaaaaCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTC < 2:1550693/90‑1 atccaaaaaCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTC < 2:1302635/90‑1 ATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCT > 2:371231/1‑100 ATCCAACAACGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTC < 2:1619152/99‑1 ATCCAAAAGAGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAAACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTC < 2:3456218/99‑1 TCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC > 1:166312/1‑100 CCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTaa > 1:1966631/1‑98 CGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTT > 2:1722970/1‑100 GTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAA > 2:1883812/1‑100 ACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATTGGAATACGATATGCAACATACCTCATAT > 1:81586/1‑100 AAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGTGAATACGATATGCAAAACAACTCATATCGCC > 1:1249171/1‑100 AAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTCCTTTTCTCTTTTTTTTGTCTATTACAAATGGTAATACGATCTGCAACACAACTTATATCGCaatt > 2:13963/1‑95 AGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATTGCCTTT > 2:2336742/1‑98 AGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGTCG > 2:2907755/1‑96 AGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGG > 1:82920/1‑100 GAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTTTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGt > 2:2204900/1‑99 GAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATttccttt > 2:2085748/1‑90 AGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATTTCCTTTGGtt > 2:2065051/1‑98 AGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGTCTTTGGAT > 2:3590383/1‑100 AGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGAT > 1:1591907/1‑100 AGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGAT > 1:1484195/1‑100 AGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGAT > 1:1588303/1‑100 GAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTTTCTATTACAAATGGAAATACGATATGCAATTCAACTTATATatttgtt > 1:1319608/1‑88 GAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTTCAATTGGTAATAAGTTATGCAACACAACTTATATCGCCGTTGGATA > 1:3135324/1‑100 GAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCACCGTTGGATA > 1:833104/1‑100 AGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAA > 2:3837773/1‑97 AGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTATCTATTACAAATGGGAATACGATATGTAACACAACACATATCGCCGTTGTATAAACC > 1:125261/1‑100 GTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCC > 2:1625339/1‑99 TACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCG < 2:2098045/100‑1 TTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTAGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTT < 1:3772157/100‑1 TCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATACCCCTCGCGATAATTAGTTTTAGCGGCttcttt > 2:3593275/1‑93 CTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAG < 1:1987084/100‑1 TCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAATCCTCGCGATAATTAGTTTTAGCGGCtactttatt > 2:2248003/1‑91 CTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTT < 2:3286156/100‑1 GCGAGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2900629‑2900520‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttacttttctcTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTT > NC_000913/2900560‑2900658 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |