New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4614762	188 (1.190)	14 (0.090)	9/170	NT	7.1%	coding (782/864 nt)	yjjW	putative pyruvate formate lyase activating enzyme
	?	NC_000913	= 4614786	187 (1.240)					coding (758/864 nt)	yjjW	putative pyruvate formate lyase activating enzyme
Rejected: Frequency below cutoff threshold.

CGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4614660‑4614762 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgAGGCGCAAAGCTGGGCGAGCGCCACGCCGGAAGACGTTGAGCCGTTGGCTGATGCGTTAAAGGTGCGCGGGGTGAGCCGGTTGATATTTCCGGCGCTCT  <  NC_000913/4614786‑4614688                                                                                                                                                                                                            CGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCG                                                                                                        <  1:2260608/100‑1  GTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGG                                                                                                       >  1:2081207/1‑100   TAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGC                                                                                                      <  2:523166/100‑1   TAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGC                                                                                                      >  1:3459066/1‑100   TAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCGCACCCCGCGCACCTTTAACGCATCAGCCAACGTCTCAGCGTCTTCCGGC                                                                                                      >  1:1462245/1‑100    AGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCG                                                                                                     >  2:434773/1‑100    AGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCG                                                                                                     >  2:1877344/1‑100                           ATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGAGGCGCAAAGCTGGGCGAGCGCC                                                                              <  1:149462/100‑1                            TAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCACCAGCCAACGGCTCAACGTCTTCCGGCGAGGCGCAAAGCTGGGCGAGCGCCA                                                                             <  1:3797423/100‑1                               AGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGAGGCGCAAAGCTGGGCGAGCGCCACGC                                                                          <  2:1937981/100‑1                                GCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC                                                                         <  1:2505829/100‑1                                GCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC                                                                         <  1:3239979/100‑1                                GCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC                                                                         <  2:1191595/100‑1                                GCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTGAACGCATCAGCCAACGGCTCAACGGCTTCCGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCC                                                                         <  2:1593168/100‑1                                 CGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCCG                                                                        <  1:1955824/100‑1                                  GCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCCGG                                                                       <  1:1639096/100‑1                                  GCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCCGG                                                                       <  1:1839676/100‑1                                   CCGGAAATATCAACCGGCTCACCCCGGGCACCTTTACCGCAGCAGCCAACGGCTGAACGTCTTCCGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCCG                                                                        <  1:3017681/98‑1                                   CCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCCGGA                                                                      <  2:1451781/100‑1                                                   GCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCCGGAAGACGTTGAGCCGTTG                                                      <  1:1695953/100‑1                                                                ACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCCGGAAGACGTTGAGCCGTTGGCTGATGCGTTAA                                         <  2:1047172/100‑1                                                                                                    GGCGAGGCGCAAAGCTGGGCGAGCGCCACGCCGGAAGACGTTGAGCCGTTGGCTGATGCGTTAAAGGTGCGCGGGGTGAGCCGGTTGATATTTCCGGCGC     >  2:1959940/1‑100                                                                                                    GGCGAGGCGCAAAGCTGGGCGAGCGCCACGCCGGAAGACGTTGAGCCGTTGGCTGATGCGTTAAAGGTGCGCGGGGTGAGCCGGTTGATATTTCCGGCGC     <  2:2598782/100‑1                                                                                                     GCGAGGCGCAAAGCTGGGCGAGCGCCACGCCGGAGGACGTTGAGCCGTTGGCTGATGCGTTAAAGGTGCGCGGGGTGAGCCGGTTGATATTTCCGGCGC     >  2:1260640/1‑99                                                                                                      CGAGGCGCAAAGCTGGGCGAGCGCCACGCCGGAAGACGTTGAGCCGTTGGCTGATGCGTTAAAGGTGCGCGGGGTGAGCCGGTTGATATTTCCGGCGCTC   >  2:2764447/1‑100                                                                                                       GAGGCGCAAAGCTGGGCGAGCGCCACGCCGGAAGACGTTGAGCCGTTGGCTGATGCGTTAAAGGTGCGCGGGGTGAGCCGGTTGATATTTCCGGCGCTCT  <  2:282915/100‑1                                                                                                                                                                                                            CGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4614660‑4614762 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgAGGCGCAAAGCTGGGCGAGCGCCACGCCGGAAGACGTTGAGCCGTTGGCTGATGCGTTAAAGGTGCGCGGGGTGAGCCGGTTGATATTTCCGGCGCTCT  <  NC_000913/4614786‑4614688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.