| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4625722 = | 154 (0.970) | 16 (0.110) | 9/164 | NT | 10.7% | coding (828/969 nt) | serB | 3‑phosphoserine phosphatase |
| ? | NC_000913 | 4625746 = | 124 (0.850) | coding (852/969 nt) | serB | 3‑phosphoserine phosphatase | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
ACCCCCATCAGGTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4625826‑4625722‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaggGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGGGGTATTCTGCATCCTCTCAGG > NC_000913/4625746‑4625844 ACCCCCATCAGGTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCG < 1:1286274/100‑1ACCCCCATCAGGTCAGCGTGACGGATGGTGACGTCCGCCGTTTCATGCACTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCG < 1:2087973/100‑1 CCCCCATCAGGTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCCCTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCGG > 1:511897/1‑100 CCCCCATCAGGTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCGG > 1:3714456/1‑100 CCCCCATCAGGTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCGG > 1:3600154/1‑100 CCCCCATCAGGTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGACTTGGCATGGTAGGAAATCCCCAGCCCTGCCGCTTTGATCCTCGG > 2:1875044/1‑100 CCCCATCATCTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCACGGTAGGCAATCACCAGCCCTGCCGCTTTGATCATC < 1:3837653/97‑1 ctCATCAGGTCAGCGTGACTGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCGGCA < 1:2077976/98‑1 CCCATCAGGTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCGGCA < 1:1348035/100‑1 CCATCAGGTCTGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCGGCAG < 1:2900179/100‑1 CCATCAGGTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCATGGTAGGTAATCCCCAGCACTGCCGCTTTGATCATCGGCAG < 1:2645920/100‑1 CCATCAGGTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCGGCAG < 1:1501698/100‑1 CCATCAGGTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCGGCAG > 1:2004600/1‑100 CATCAGGTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCGGCAGG < 1:2609269/100‑1 CATCAGGTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCGGCAGG < 1:45327/100‑1 CATCAGGTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCGGCAGG < 1:4284548/100‑1 gggCAGCGTGACGGAGGGTGACTTCCGCCTTTTCATTCACTTTTGGCTGGGCATGGGAGGCAATCCCCAGCCCTGCCGCTTTGATCATCGGCAGGGCatt > 1:3507429/4‑97 CCCCAGCCCTGCCGCTTTGATCATCGGCAGGGCCGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGGGGAAGTCACCATCCGTCACGCTG > 1:1445105/1‑99 CCAGCCCTGCCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACC > 2:464498/1‑100 CCAGCCCTGCCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACC > 2:2436910/1‑100 CCAGCCCTGCCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACC > 2:1212676/1‑100 CAGCCCTGCCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCT > 2:610299/1‑100 CAGCCCTGCCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCT > 2:1334460/1‑100 CAGCCCTGCCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCT > 1:890126/1‑100 AGCCCTGCCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTG > 2:3208972/1‑100 AGCCCTGCCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTG > 1:1313704/1‑100 AGCCCTGCCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTG > 2:3388831/1‑100 GCCCTGCCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGA > 1:2101326/1‑100 CCCTGCCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGAT > 2:1074015/1‑100 CCTGCCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATG > 2:3080909/1‑100 TGCCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGG > 2:1189570/1‑100 TGCCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGG < 1:3388813/100‑1 gtCGCTTTGATCATCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGGG > 1:528554/3‑100 GGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGGGGTATTCTGCATCCTC > 2:2343744/1‑100 GCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGGGGTATTCTGCATCCTCT < 2:1535625/100‑1 CAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGGGGTATTCTGGATCCTCTC > 1:3943679/1‑100 CAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGGGGTATTCTGCATCCTCTC < 2:4047237/100‑1 CAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGGGGTATTCTGCATCCTCTC > 1:1785615/1‑100 GGGCTGGGGATTGCCTACCATGCCATGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGGGGTATTCTGCATCCTCTCAG > 1:4059202/1‑100 GGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGGGGTATTCTGCATCCTCTCAGG < 2:1388896/100‑1 GGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGGGGTATTCTGCATCCTCTCAGG < 1:3480027/100‑1 GGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGGGGTATTCTGCATCCTCTCAGG < 1:2353419/100‑1 ACCCCCATCAGGTCAGCGTGACGGATGGTGACTTCCGCCTTTTCATTCACTTTTGGCTTGGCATGGTAGGCAATCCCCAGCCCTGCCGCTTTGATCATCGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4625826‑4625722‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaggGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGGGGTATTCTGCATCCTCTCAGG > NC_000913/4625746‑4625844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |