| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 50327 = | NA (NA) | 12 (0.080) | 5/164 | NT | NA | noncoding (1/37 nt) | REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 50360 = | NA (NA) | noncoding (34/37 nt) | REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
TGTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/50431‑50327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAGG > NC_000913/50360‑50458 TGTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCAT > 2:2026621/1‑100TGTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCAT > 2:2026427/1‑100TGTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCAT > 2:1315362/1‑100 GTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATC > 2:1497983/1‑100 TCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAATCGGCGGCGTCTTAAACACAGCCTGGTAAAGGAAGGCCGTATAAGACGCGACCGGCGTCGCATC > 1:2307751/1‑99 TCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCC > 2:3143647/1‑100 TCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCC > 1:2308130/1‑100 CCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCG > 1:2955717/1‑100 CCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCC < 1:4240989/99‑1 CAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG > 2:3080592/1‑100 CAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG > 2:2323929/1‑100 CAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG > 2:1531196/1‑100 CAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGAAATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG > 1:508488/1‑100 CAGCCGTCGAACCGGCATAAGGATTTAGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG > 2:2683098/1‑100 AGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGGC < 2:875934/100‑1 AGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGGC > 2:705931/1‑100 AGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG < 1:385863/99‑1 AGCCGTCGAAACGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGGC > 2:1548803/1‑100 CCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAACCACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG < 1:385541/97‑1 GGCCGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACG > 1:220425/1‑98 GGCCGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACCCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGcccgc > 1:1915430/1‑95 GCCGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCT > 2:2723814/1‑100 GCCGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCT > 1:3748877/1‑100 GCCGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCT > 1:320199/1‑100 CCGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCT > 2:3244684/1‑99 CGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCTACGGCTGG > 2:1262598/1‑100 CGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGG > 2:308330/1‑100 GGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGA > 2:4064673/1‑100 GGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGA > 2:1574024/1‑100 GGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGA > 2:3277096/1‑100 GGATAAGACGCGACCGGCGTCGCATCCGGCCTTCATATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTG > 1:1753653/1‑98 ATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAG < 1:1555484/100‑1 ATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAG > 2:1993234/1‑100 ATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAG < 2:2770048/100‑1 ATCCGGCCTTCCTATATCAGGCAGTGGATAAGACGCCGCCGCGTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAG < 1:4141838/100‑1 TCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGC < 2:4226810/100‑1 CCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCG < 2:2089970/100‑1 CGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGC > 1:3881050/1‑100 GGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCn < 2:4243958/100‑2 GGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCA > 1:729625/1‑100 GCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAG < 1:1329293/100‑1 GCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTAGCTTCCCAGCGCAG < 1:2723799/100‑1 CCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAGG < 2:3778605/100‑1 TGTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/50431‑50327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAGG > NC_000913/50360‑50458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |