New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1269275NA (NA)26 (0.180) 9/162 NT 15.2% coding (1/108 nt) ldrA toxic polypeptide, small
?NC_000913 = 1269313 159 (1.010)intergenic (‑38/+390) ldrA/ldrB toxic polypeptide, small/toxic polypeptide, small

Only 100 of 148 total aligned reads displayed.

AATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACG  >  NC_000913/1269207‑1269374
                                                                    |                                                                                                   
nataattCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTG                                                                      <  1:14‑M2/99‑1 (MQ=255)
aataatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTG                                                                      >  2:1653217‑M2/1‑100 (MQ=255)
aataatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTG                                                                      >  2:2013156‑M2/1‑100 (MQ=255)
 ataatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGC                                                                     >  2:1838675‑M2/1‑100 (MQ=255)
  taatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGtg                                                                    >  2:2978028‑M2/1‑98 (MQ=255)
  taatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCG                                                                    >  1:1178688‑M2/1‑100 (MQ=255)
  taatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCG                                                                    >  2:2217222‑M2/1‑100 (MQ=255)
  taatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCG                                                                    >  2:3359231‑M2/1‑100 (MQ=255)
  taatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCG                                                                    >  2:2783707‑M2/1‑100 (MQ=255)
  taatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCG                                                                    <  2:2858667‑M2/100‑1 (MQ=255)
   aatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGG                                                                   <  1:1865470‑M2/100‑1 (MQ=255)
   aatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGG                                                                   <  2:3631293‑M2/100‑1 (MQ=255)
   aatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGG                                                                   <  1:1989739‑M2/100‑1 (MQ=255)
    atTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGa                                                                  >  1:872556‑M2/1‑99 (MQ=255)
    atTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGC                                                                  >  1:3669963‑M2/1‑100 (MQ=255)
    atTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGC                                                                  <  1:35984‑M2/100‑1 (MQ=255)
    atTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGC                                                                  >  1:2528515‑M2/1‑100 (MQ=255)
    atTCCCGCCAGGATCGGTGCTGCCAGGTCGTGACAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTG                                                                      <  1:3608544‑M2/96‑1 (MQ=255)
       cccGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTAT                                                               <  2:2493565‑M2/100‑1 (MQ=255)
       cccGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTAT                                                               <  2:893715‑M2/100‑1 (MQ=255)
       cccGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTAT                                                               <  1:262948‑M2/100‑1 (MQ=255)
       cccGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTAT                                                               <  2:3609696‑M2/100‑1 (MQ=255)
               gATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAAt                                                       >  2:433177/1‑100 (MQ=11)
               gATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAAt                                                       <  2:2368217/100‑1 (MQ=11)
               gATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAAt                                                       >  1:399895/1‑100 (MQ=11)
               gATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAAt                                                       <  2:2045831/100‑1 (MQ=11)
               gATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAAt                                                       >  2:1741230/1‑100 (MQ=11)
                   ggTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCGGCCTTGTTGTAATGACAACATTTTCCGGCTCTTCTTGAATTGt                                                    >  2:2718446/1‑99 (MQ=255)
                   ggTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGtt                                                   >  1:2100760/1‑100 (MQ=35)
                   ggTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGtt                                                   >  2:2256969/1‑100 (MQ=35)
                   ggTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGtt                                                   >  2:1411019/1‑100 (MQ=35)
                     tgctgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCt                                                 <  2:3023073/100‑1 (MQ=38)
                      gctgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTg                                                <  2:2116652/100‑1 (MQ=38)
                      gctgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTg                                                <  1:659179/100‑1 (MQ=38)
                       ctgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTgg                                               >  2:2816102/1‑100 (MQ=40)
                        tgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGt                                              <  2:298421/100‑1 (MQ=40)
                        tgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGt                                              <  1:2858651/100‑1 (MQ=40)
                            aGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATGGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCaa                                          >  1:1372017/1‑100 (MQ=255)
                            aGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCaa                                          >  2:2517450/1‑100 (MQ=255)
                            aGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCaa                                          <  1:2995125/100‑1 (MQ=255)
                            aGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTATTGACCTGCTATGGTTCaa                                          >  2:4116720/1‑100 (MQ=11)
                             ggTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCaa                                          >  2:279198/1‑99 (MQ=255)
                             ggTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAg                                         >  2:770396/1‑100 (MQ=255)
                              gTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGa                                        <  1:3755104/100‑1 (MQ=255)
                               tCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGAt                                       >  2:2432195/1‑100 (MQ=255)
                                ggTGCAAGTAAGTCATGGCAAACTGCGAGAGCGTCATATAGCTGCTTTTTTCTACTTACAACTTTTTGCGGCTCGGATTCAATTCTCCTGGTTCCAGAt                                       <  1:2800572/98‑1 (MQ=2)
                                 gTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTa                                     <  1:3934079/100‑1 (MQ=255)
                                  tGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAg                                    >  1:538271/1‑100 (MQ=255)
                                  tGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAg                                    <  2:3440014/100‑1 (MQ=255)
                                   gCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGc                                   <  1:1011709/100‑1 (MQ=255)
                                    ccAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGcc                                  >  2:1140405/1‑100 (MQ=255)
                                     cAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGccc                                 >  2:171105/1‑100 (MQ=255)
                                      aGAAAATCATGGCAAACTGCGCTAGCGTCATCTAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGcccc                                <  1:2966250/100‑1 (MQ=255)
                                      aGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGcccc                                <  2:832638/100‑1 (MQ=255)
                                      aGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGccc                                 >  1:4186362/1‑99 (MQ=255)
                                       gAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGccccc                               >  2:3296828/1‑100 (MQ=255)
                                       gAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGccccc                               <  1:3175835/100‑1 (MQ=255)
                                        aaaaTCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCg                              <  2:2579190/100‑1 (MQ=255)
                                           aTCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTc                           <  2:4358974/100‑1 (MQ=255)
                                             cgtagCAAACTGCGCGAGCGCCAGATAGCCGCCTTGTTGAAATGACAACAGTTTGGGGCGATGCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtg                         <  1:3097690/96‑1 (MQ=14)
                                              aTGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgt                        <  1:247565/100‑1 (MQ=255)
                                               tGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgtt                       >  2:4063516/1‑100 (MQ=255)
                                               tGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgtt                       <  1:1673312/100‑1 (MQ=255)
                                                ggCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgttg                      <  2:4234885/100‑1 (MQ=255)
                                                ggCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgttg                      <  2:289545/100‑1 (MQ=255)
                                                ggCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgttg                      <  1:3371024/100‑1 (MQ=255)
                                                 gCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATTACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgttg                      <  1:2171378/99‑1 (MQ=255)
                                                 gCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTTTTCTGGTTCAAGATTAGCCCCCGTTCtgttgt                     >  2:1681982/1‑100 (MQ=255)
                                                 gCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgttgt                     >  1:2095706/1‑100 (MQ=255)
                                                 gCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgttgt                     <  1:2328745/100‑1 (MQ=255)
                                                  cAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgttgt                     >  2:2143694/1‑99 (MQ=255)
                                                   aaaCTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCa                   <  2:1989747/100‑1 (MQ=255)
                                                   aaaCTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCa                   <  2:1008777/100‑1 (MQ=255)
                                                    aaCTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTTTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAg                  <  1:946845/100‑1 (MQ=255)
                                                    aaCTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTGCAAGATTAGCCCCCGTTCTGTTGTCa                   >  2:3309111/1‑99 (MQ=255)
                                                     aCTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAgg                 >  2:3425125/1‑100 (MQ=255)
                                                     aCTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAgg                 <  2:1438701/100‑1 (MQ=255)
                                                      cTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGt                <  1:3267727/100‑1 (MQ=255)
                                                       tGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGtt               >  2:3372512/1‑100 (MQ=255)
                                                        gcgcGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTg              >  2:3123167/1‑100 (MQ=255)
                                                          gcgAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTCCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGt             <  1:3443709/99‑1 (MQ=255)
                                                           cgAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgactttctggcacgacctggcggcaccga           <  2:3127516‑M2/100‑53 (MQ=255)
                                                            gAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTAcc          <  2:4223888/100‑1 (MQ=255)
                                                             aGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggccgcaccgatc         <  2:3968595‑M2/100‑55 (MQ=255)
                                                             aGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatc         <  2:1667765‑M2/100‑55 (MQ=255)
                                                             aGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgactttctggcacgacctggcggcaccgatc         <  2:2898326‑M2/100‑55 (MQ=255)
                                                             aGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTAcc          <  2:1056435/99‑1 (MQ=255)
                                                               cGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACctct       >  1:1005753/1‑100 (MQ=255)
                                                               cGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACctct       >  2:3975868/1‑100 (MQ=255)
                                                                gTCATATCTCCTCCTTGTTGTAACTAAAACAGTTTTCGGCTATTCTTGAATTGTTCTCGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACctct       <  1:3260742/99‑1 (MQ=17)
                                                                 tCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctgg     <  1:1737649‑M2/100‑59 (MQ=255)
                                                                 tCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctgg     <  1:1673068‑M2/100‑59 (MQ=255)
                                                                 tCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCa     >  2:572970/1‑100 (MQ=255)
                                                                   atatAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcg   <  2:2146196‑M2/100‑61 (MQ=255)
                                                                   atatAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAAc   <  1:3030363/100‑1 (MQ=255)
                                                                   atatAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAAc   >  1:4096361/1‑100 (MQ=255)
                                                                    tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgactttctggcacgacctggcggcaccgatcctggcgg  <  2:1065184‑M2/100‑62 (MQ=255)
                                                                    tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACg  <  1:2117964/100‑1 (MQ=255)
                                                                    tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACg  >  1:560651/1‑100 (MQ=255)
                                                                    tataGCCGCCTTGTTGTAATGAAAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgg  <  1:1969683‑M2/100‑62 (MQ=255)
                                                                    |                                                                                                   
AATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACG  >  NC_000913/1269207‑1269374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.