New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 20668320 (0.000)24 (0.170) 10/160 NT 100% noncoding (522/1195 nt) IS5 repeat region
?NC_000913 = 2066857 NA (NA)noncoding (497/1195 nt) IS5 repeat region

Only 100 of 175 total aligned reads displayed.

CGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCG  >  NC_000913/2066736‑2066931
                                                                                                |                                                                                                   
cGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATACATCTCCGGATCGGGTTGCTGCTCGTTGTTCTTGCTCGAcct                                                                                                  >  1:421587‑M1/1‑97 (MQ=255)
                              gCCACTGATTGCCTTTCTTTGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaa                                                                    <  1:3234495‑M1/100‑34 (MQ=255)
                               ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                                   <  2:3680539‑M1/100‑35 (MQ=255)
                                  cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                                <  2:3898579‑M1/100‑38 (MQ=255)
                                  cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                                <  2:3605722‑M1/100‑38 (MQ=255)
                                  cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                                <  2:3469858‑M1/100‑38 (MQ=255)
                                    gATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaa                                                              <  1:1752213‑M1/100‑40 (MQ=255)
                                     aTTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaa                                                             <  2:2051462‑M1/100‑41 (MQ=255)
                                      ttGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaag                                                            <  2:3170064‑M1/100‑42 (MQ=255)
                                      ttGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTCTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaag                                                            <  1:462370‑M1/100‑42 (MQ=255)
                                       tGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaaga                                                           <  2:1445576‑M1/100‑43 (MQ=255)
                                       tGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                                <  1:584054‑M1/95‑38 (MQ=255)
                                         ccTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagc                                                         <  2:1165847‑M1/100‑45 (MQ=255)
                                                                                        cgtggTCGAtgcccccatcagtgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:1614097‑M1/98‑92 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacacagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  1:2633833‑M1/1‑9 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:2136736‑M1/100‑92 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  1:3770084‑M1/1‑9 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  2:1596537‑M1/1‑9 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:3035366‑M1/100‑92 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  2:1058156‑M1/1‑9 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  1:1009884‑M1/1‑9 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  2:3930168‑M1/1‑9 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:3861879‑M1/100‑92 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:2333732‑M1/100‑92 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:2256632‑M1/100‑92 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  1:150232‑M1/1‑9 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:3747743‑M1/100‑92 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagt            >  1:3793851‑M1/1‑9 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacccagctagaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:200070‑M1/100‑92 (MQ=255)
                                                                                        cTTGGTCGAtgccaccatcattgaggcacacagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagt            <  2:1594425‑M1/98‑90 (MQ=255)
                                                                                         tttgtcgAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:749052‑M1/97‑93 (MQ=255)
                                                                                         ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacgaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:1164562‑M1/100‑93 (MQ=255)
                                                                                         ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:1352154‑M1/100‑93 (MQ=255)
                                                                                         ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:3631318‑M1/100‑93 (MQ=255)
                                                                                         ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:1330685‑M1/100‑93 (MQ=255)
                                                                                         ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:772108‑M1/100‑93 (MQ=255)
                                                                                         ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         >  2:2549539‑M1/1‑8 (MQ=255)
                                                                                         ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:1722262‑M1/100‑93 (MQ=255)
                                                                                         ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         >  2:249138‑M1/1‑8 (MQ=255)
                                                                                         ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:2308872‑M1/100‑93 (MQ=255)
                                                                                         ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:1130225‑M1/100‑93 (MQ=255)
                                                                                         tgggtcGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcttcagaccaagaaaggcaatcagtggc         <  2:2682610‑M1/98‑93 (MQ=255)
                                                                                          tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        <  1:3555664‑M1/100‑94 (MQ=255)
                                                                                          tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        >  2:4062331‑M1/1‑7 (MQ=255)
                                                                                          tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:1107438‑M1/99‑93 (MQ=255)
                                                                                          tGGTCGAtgcaaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccgaagatgcatcagacaaagaaaggcaatcagt            <  1:3382529‑M1/96‑90 (MQ=255)
                                                                                          tGGTCGAagccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        >  2:2316634‑M1/1‑7 (MQ=255)
                                                                                           ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       <  1:4064206‑M1/100‑95 (MQ=255)
                                                                                           ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  1:1440409‑M1/1‑6 (MQ=255)
                                                                                           ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  2:2004496‑M1/1‑6 (MQ=255)
                                                                                            gTCGAtgccaccatcattgaggcacccagctctaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      <  1:4001351‑M1/100‑96 (MQ=255)
                                                                                            gTCGAtgccaccatcattgaggcacccagctcgaccaagaaccaagagcagcaacgcgatccggcgatgcatcagaccaagaaaggcaatcagtggcac       >  1:293368‑M1/1‑5 (MQ=255)
                                                                                            gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggcgatgcatcagacccagaacggcaatcagtggcact      >  1:2591779‑M1/1‑5 (MQ=255)
                                                                                            gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaagggcaatcagtggcact      >  1:2573939‑M1/1‑5 (MQ=255)
                                                                                            gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:3010712‑M1/1‑5 (MQ=255)
                                                                                            gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:4255886‑M1/1‑5 (MQ=255)
                                                                                            gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:344492‑M1/1‑5 (MQ=255)
                                                                                            gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:1276474‑M1/1‑5 (MQ=255)
                                                                                            gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:912829‑M1/1‑5 (MQ=255)
                                                                                            gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:750624‑M1/1‑5 (MQ=255)
                                                                                             tCGAtgccagcatcgttgaggcacccagctcgaccaagcacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacgt     <  1:2016909‑M1/100‑97 (MQ=255)
                                                                                             tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcctcagaccaagaaaggcaatcagtggcactt     >  2:4258752‑M1/1‑4 (MQ=255)
                                                                                             tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     >  1:1449092‑M1/1‑4 (MQ=255)
                                                                                             tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     >  2:2480847‑M1/1‑4 (MQ=255)
                                                                                             tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:3956776‑M1/1‑4 (MQ=255)
                                                                                             tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggacatgcatcagaccaagaacggcaatcagtggcac       >  1:1330281‑M1/1‑4 (MQ=255)
                                                                                              cGAtgccaccatcattgaggcacccagctcgaccaagcacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  1:2353953‑M1/1‑3 (MQ=255)
                                                                                              cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  2:3946107‑M1/1‑3 (MQ=255)
                                                                                              cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  2:3331728‑M1/1‑3 (MQ=255)
                                                                                              cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  1:19784‑M1/1‑3 (MQ=255)
                                                                                              cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  2:53486‑M1/1‑3 (MQ=255)
                                                                                              cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    <  1:3723984‑M1/100‑98 (MQ=255)
                                                                                              cGAtgccaccatcatagaggcacccagctcgaccaagaacaaagagcagcaacgcgacccgaaaatgcatcagaacaagaaagacaatcagtgacacttt    >  1:1710883‑M1/1‑3 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttn   <  2:2396742‑M1/100‑99 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:3827351‑M1/100‑99 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:640712‑M1/100‑99 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:640148‑M1/100‑99 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  1:1090394‑M1/1‑2 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:1042811‑M1/100‑99 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:1879922‑M1/100‑99 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  1:731774‑M1/1‑2 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:1524355‑M1/100‑99 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:3329561‑M1/100‑99 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  1:31045‑M1/1‑2 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:2700807‑M1/100‑99 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:2942801‑M1/100‑99 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:3519816‑M1/100‑99 (MQ=255)
                                                                                               gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatcagcagatgcatcagaccaagaaaggcaatcagtggcactttg   >  2:1837075‑M1/1‑2 (MQ=255)
                                                                                                atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagcaaggcaatcagtggcactttgg  <  2:4403868‑M1/100‑100 (MQ=255)
                                                                                                atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:2449242‑M1/100‑100 (MQ=255)
                                                                                                atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  >  2:3848787‑M1/1‑1 (MQ=255)
                                                                                                atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:2757114‑M1/100‑100 (MQ=255)
                                                                                                atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:4020294‑M1/100‑100 (MQ=255)
                                                                                                atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  >  2:4161133‑M1/1‑1 (MQ=255)
                                                                                                atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:3580948‑M1/100‑100 (MQ=255)
                                                                                                atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:1023004‑M1/100‑100 (MQ=255)
                                                                                                atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  >  1:714602‑M1/1‑1 (MQ=255)
                                                                                                atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:4047611‑M1/100‑100 (MQ=255)
                                                                                                atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:4360212‑M1/100‑100 (MQ=255)
                                                                                                atgccaccatcatagaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  >  1:2728737‑M1/1‑1 (MQ=255)
                                                                                                |                                                                                                   
CGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCG  >  NC_000913/2066736‑2066931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.