BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2146653	NA (NA)	8 (0.060)	6/164	NT	NA	noncoding (54/84 nt)	REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	= 2146683	NA (NA)	8 (0.060)	6/164	NT	NA	noncoding (84/84 nt)	REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 178 total aligned reads displayed.

GTGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGC  >  NC_000913/2146554‑2146752

 tGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACACTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAg                                                                                                     >  2:224556/1‑99 (MQ=255)

  gAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgc                                                                                                   >  1:3527863‑M1/1‑98 (MQ=255)

  gAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgc                                                                                                   <  2:69945‑M1/100‑3 (MQ=255)

    aTAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccg                                                                                                 <  2:3046360‑M1/100‑5 (MQ=255)

    aTAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccg                                                                                                 <  1:568997‑M1/100‑5 (MQ=255)

     tagtagTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccgg                                                                                                >  1:1045580‑M1/1‑95 (MQ=255)

     tagtagTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccgg                                                                                                >  2:2764051‑M1/1‑95 (MQ=255)

      agtagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccgga                                                                                               <  1:1638633‑M1/100‑7 (MQ=255)

        tagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATa                                                                                             <  1:1892644/100‑1 (MQ=255)

        tagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATa                                                                                             <  2:3508702/100‑1 (MQ=255)

          gtTATTTCGCGATTAACTGCGGCGTGCTTACCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATa                                                                                             <  1:1042553/98‑1 (MQ=255)

          gtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAg                                                                                           <  1:2278319/100‑1 (MQ=255)

          gtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAg                                                                                           <  1:2761790/100‑1 (MQ=255)

             aTTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGgcg                                                                                        <  1:2265910/100‑1 (MQ=255)

             aTTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGgcg                                                                                        <  2:270915/100‑1 (MQ=255)

              tttCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGgcgc                                                                                       >  2:906066/1‑100 (MQ=255)

              tttCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGgcgc                                                                                       <  2:2738685/100‑1 (MQ=255)

               ttCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCt                                                                                      >  1:3121580/1‑100 (MQ=255)

               ttCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCt                                                                                      >  1:285720/1‑100 (MQ=255)

                tCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTc                                                                                     <  1:4159532/100‑1 (MQ=255)

                tCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTc                                                                                     <  1:4353692/100‑1 (MQ=255)

                tCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTc                                                                                     >  2:296493/1‑100 (MQ=255)

                 cgcgATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGTCGCt                                                                                      >  2:1907312/1‑98 (MQ=255)

                     aTTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCAcc                                                                                <  1:4388872/100‑1 (MQ=255)

                       tAACTGAGGCGTGCTTCCCCATCGCCTGATTCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGc                                                                                   >  1:3322509/1‑95 (MQ=255)

                           tGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCC                                                                          <  2:575149‑M2/100‑1 (MQ=255)

                              ggCGTGCTTCGCCATCGCCTGATGCGACGCTACCGCGTCTTATCATGCCTACAAATCCCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggc                                                                       <  1:2123366‑M1/100‑31 (MQ=255)

                              ggCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggc                                                                       <  2:404540‑M1/100‑31 (MQ=255)

                              ggCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGC                                                                       >  2:2440165‑M2/1‑100 (MQ=255)

                               gCGTGCTTCCCCATCGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggcc                                                                      <  1:3854662‑M1/100‑32 (MQ=255)

                                cGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggcct                                                                     <  1:1581310‑M1/100‑33 (MQ=255)

                                cGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGa                                                                     >  2:1603454/1‑100 (MQ=255)

                                 gTGCTTCCCCATCGCCTGATGCGACGCTAGCGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGAc                                                                    <  1:685416/100‑1 (MQ=255)

                                 gTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCgtc                                                                    <  2:2971572/100‑3 (MQ=255)

                                  tGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggcctgg                                                                   <  2:2441685‑M1/100‑35 (MQ=255)

                                   gCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCa                                                                  >  2:377670/1‑100 (MQ=255)

                                    cTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCaa                                                                 >  2:804744/1‑100 (MQ=255)

                                      tCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGggcggatgcggtgcgagcgccttatccggcctgggg                                                                 <  1:1196515‑M1/98‑37 (MQ=255)

                                      tCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACg                                                               <  2:124051/100‑1 (MQ=255)

                                      tCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACg                                                               <  2:4127420/100‑1 (MQ=255)

                                       ccccATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGt                                                              >  1:3571315/1‑100 (MQ=255)

                                        cccATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTc                                                             >  2:215214/1‑100 (MQ=255)

                                        cccATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTc                                                             <  2:4269728/100‑1 (MQ=255)

                                          cATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCAt                                                           >  2:1014164/1‑100 (MQ=255)

                                          cATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCAt                                                           >  2:306209/1‑100 (MQ=255)

                                            tCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGc                                                         <  1:1121879/100‑1 (MQ=255)

                                             cGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCt                                                        >  1:2576223/1‑100 (MQ=255)

                                              gCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCtt                                                       <  1:804740/100‑1 (MQ=255)

                                              gCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCtt                                                       >  2:908108/1‑100 (MQ=255)

                                              gCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCtt                                                       >  2:2268981/1‑100 (MQ=255)

                                                cTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTc                                                      >  1:4003867/1‑99 (MQ=255)

                                                cTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCg                                                     <  1:3617344/100‑1 (MQ=255)

                                                  gATGGGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGAGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCgg                                                    >  1:244662/1‑98 (MQ=255)

                                                  gATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTc                                                   <  2:4003894/100‑1 (MQ=255)

                                                   aTGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCt                                                  >  1:3171333/1‑100 (MQ=255)

                                                   aTGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCt                                                  <  1:1165474/100‑1 (MQ=255)

                                                   aTGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCt                                                  <  2:2881386/100‑1 (MQ=255)

                                                    tGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTg                                                 >  1:4099579/1‑100 (MQ=255)

                                                     gCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCACCGTCATGCTTCGTCTgg                                                >  2:954352/1‑100 (MQ=255)

                                                       gACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGtt                                              <  2:251517/100‑1 (MQ=255)

                                                       gACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATACGGCGACCAACGTCATGCTTCGTCTGGtt                                              <  1:1082525/100‑1 (MQ=255)

                                                        aCGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTg                                             >  2:4218373/1‑100 (MQ=255)

                                                          gCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGcc                                           <  2:3641487/100‑1 (MQ=255)

                                                            tAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAg                                         <  1:3474181/100‑1 (MQ=255)

                                                            tAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAg                                         <  1:2983003/100‑1 (MQ=255)

                                                                 cgTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTc                                    >  2:2619390/1‑100 (MQ=255)

                                                                  gTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTcc                                   <  1:1294541/100‑1 (MQ=255)

                                                                   tCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCg                                  <  2:1131273/100‑1 (MQ=255)

                                                                     ttATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGta                                >  2:489011/1‑100 (MQ=255)

                                                                     ttATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGta                                <  2:3976897/100‑1 (MQ=255)

                                                                         cATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATAcc                            >  2:1409267/1‑100 (MQ=255)

                                                                         cATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATAcc                            <  1:3239686/100‑1 (MQ=255)

                                                                             ccTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGat                        <  1:454327/100‑1 (MQ=255)

                                                                             ccTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGat                        >  1:2317488/1‑100 (MQ=255)

                                                                             ccTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGat                        >  2:3318000/1‑100 (MQ=255)

                                                                               tACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGatat                      >  1:766465/1‑100 (MQ=255)

                                                                                  aaaTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCa                   <  1:4300075/100‑1 (MQ=255)

                                                                                  aaaTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCa                   <  1:197685/100‑1 (MQ=255)

                                                                                  aaaTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCa                   <  2:3817248/100‑1 (MQ=255)

                                                                                  aaaTAGCTCATTCCCCAGGCGGGATAAGGCGCTCGCACCGCATCCGGCGACTAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCa                   <  1:2420550/100‑1 (MQ=255)

                                                                                    aTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAAc                 >  2:1686062/1‑100 (MQ=255)

                                                                                    aTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAAc                 <  2:399622/100‑1 (MQ=255)

                                                                                     tCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACa                <  2:331540/100‑1 (MQ=255)

                                                                                      cGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAg               >  2:918418/1‑100 (MQ=255)

                                                                                       gCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgc              <  1:4291245/100‑1 (MQ=255)

                                                                                       gCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgc              <  2:1812129/100‑1 (MQ=255)

                                                                                       gCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgc              >  2:1753673/1‑100 (MQ=255)

                                                                                        cTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcataaggcgatg             <  2:2798722‑M2/100‑59 (MQ=255)

                                                                                        cTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAgcg             >  1:660296/1‑100 (MQ=255)

                                                                                            ttCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATa         <  2:2199385/100‑1 (MQ=255)

                                                                                              ccccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAg       >  2:3732729/1‑100 (MQ=255)

                                                                                              ccccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAg       >  2:3275857/1‑100 (MQ=255)

                                                                                              ccccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAg       >  2:168867/1‑100 (MQ=255)

                                                                                               cccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGa      >  2:147989/1‑100 (MQ=255)

                                                                                                 cAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAAc    <  2:3559372/100‑1 (MQ=255)

                                                                                                  aGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagcacg   <  1:3687403‑M2/100‑69 (MQ=255)

                                                                                                  aGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACg   <  1:2030616/100‑1 (MQ=255)

                                                                                                   ggCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgctagcgtcgcatcaggcgatggggaagcacgc  <  1:3854662‑M2/100‑70 (MQ=255)

                                                                                                   ggCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGc  >  1:4327814/1‑100 (MQ=255)

                                                                                                   ggCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGc  >  2:1399926/1‑100 (MQ=255)

GTGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGC  >  NC_000913/2146554‑2146752

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.