New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2304817 =NA (NA)26 (0.180) 8/164 NT 33.9% noncoding (401/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 2304948 = 55 (0.350)noncoding (532/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 196 total aligned reads displayed.

TCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCAT  >  NC_000913/2304718‑2304897
                                                                                                   |                                                                                
tCTTATCAGGCCTACCCCGCTGTGAAGTGCTCCCCCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATg                                                                                  <  2:200164/100‑1 (MQ=255)
tCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATg                                                                                  >  2:4225646/1‑100 (MQ=40)
tCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATg                                                                                  <  2:244325/100‑1 (MQ=255)
  ttATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCg                                                                                <  1:3811332/100‑1 (MQ=255)
   tATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGa                                                                               >  1:4079991/1‑100 (MQ=40)
   tATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGa                                                                               <  1:1159466/100‑1 (MQ=255)
    aTCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGAc                                                                              >  2:407367/1‑100 (MQ=255)
    aTCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGGTAGCTGATGCGAc                                                                              >  2:2232028/1‑100 (MQ=255)
      cAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGATCCGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGc                                                                            >  1:2492592/1‑100 (MQ=255)
       aGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCt                                                                           >  2:3968470/1‑100 (MQ=255)
        ggCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTg                                                                          >  2:3415645/1‑100 (MQ=255)
        ggCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTg                                                                          >  2:1094545/1‑100 (MQ=255)
         gCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTgg                                                                         >  2:2551252/1‑100 (MQ=255)
           cTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGgcg                                                                       <  2:4387903/100‑1 (MQ=255)
               acCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTc                                                                   <  2:29256/100‑1 (MQ=255)
               acCGCTGTGAAGAGCTCCGCCCCGTTGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTc                                                                   <  2:3152908/100‑1 (MQ=255)
                ccGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCt                                                                  >  2:3212896/1‑100 (MQ=255)
                ccGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCt                                                                  >  1:3933698/1‑100 (MQ=40)
                ccGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATAAGACGcgccagcgtcg                                                                  >  2:1248753/1‑90 (MQ=14)
                ccGCTGTGAAGTGCTCAACCCCGTAGGTTGGATAAGACGCTTACACCGCATCCAACATCCCACCTCCAAGCCGGTTGCCTAATGCGACGCtaccgcttc                                                                   >  1:1370797/1‑91 (MQ=11)
                 cGCTGTGAAGTGCGCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCtt                                                                 <  2:2361556/100‑1 (MQ=255)
                  gCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTa                                                                >  1:719035/1‑100 (MQ=40)
                   cTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTAt                                                               <  2:870780/100‑1 (MQ=255)
                     gtgAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCa                                                             >  1:157132/1‑100 (MQ=255)
                      tgAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAg                                                            <  2:804652/100‑1 (MQ=255)
                       gAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAgg                                                           >  2:4118277/1‑100 (MQ=255)
                       gAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAgg                                                           >  2:4345914/1‑100 (MQ=255)
                       gAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAgg                                                           <  2:582831/100‑1 (MQ=255)
                        aggggcgccACCCCGTAGGTCGGAGAAGGCGGTAACGCCGCAGCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGc                                                          <  1:1004590/93‑1 (MQ=11)
                        aaGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAgg                                                           >  2:2704795/1‑99 (MQ=255)
                        aaGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGc                                                          >  2:2324175/1‑100 (MQ=255)
                        aaGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACACCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAgg                                                           <  1:1972781/99‑1 (MQ=255)
                         aGTGCACCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc                                                         <  2:4188414/100‑1 (MQ=255)
                          gTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc                                                         <  1:1987146/99‑1 (MQ=255)
                            gCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTac                                                      >  2:3510716/1‑100 (MQ=255)
                            gCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTac                                                      <  2:4400777/100‑1 (MQ=255)
                              tCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCATCGGCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGGCTTATCAGGc                                                          >  1:1051251/1‑94 (MQ=255)
                              tCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTacac                                                    >  1:1537466/1‑100 (MQ=255)
                              tCCACCCCGGAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGCCCGAGCTGGTTGCCTGAGGCGACGCTGGCGCGTCTTATCAGGCCTacgc                                                    <  2:2973913/100‑3 (MQ=11)
                               ccACCCCTTAGGTGGGCTAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAgg                                                           <  1:1788962/92‑1 (MQ=11)
                               ccACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCTAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAgccttcccc                                                    >  1:3745210/1‑91 (MQ=11)
                               ccACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAcc                                                   >  2:1456807/1‑100 (MQ=255)
                               ccACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAcc                                                   >  2:223147/1‑100 (MQ=255)
                                ctccccGTACGTGGCAAACGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTc                                                                   <  1:1868529/81‑1 (MQ=14)
                                cACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGCCTTATCGGGCCTacactg                                                  >  1:2065980/1‑98 (MQ=14)
                                  ccccGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACCCCCCt                                                >  1:2498575/1‑100 (MQ=255)
                                  ccccGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAcc                                                   <  1:2384939/97‑1 (MQ=255)
                                   cccGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCtg                                               <  2:2993274/100‑1 (MQ=255)
                                   cccGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCtg                                               <  1:3401747/100‑1 (MQ=255)
                                   cccGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCCCTCCACCg                                                  >  1:55312/1‑97 (MQ=255)
                                     cGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCtgtg                                             <  2:1642433/100‑1 (MQ=255)
                                       tAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGaa                                           <  2:3311123/100‑1 (MQ=255)
                                       tAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGaa                                           <  2:560881/100‑1 (MQ=255)
                                        aGGTGGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAg                                          <  2:366504/100‑1 (MQ=255)
                                          gTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTg                                        >  1:4131573/1‑100 (MQ=255)
                                          gTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCCCTACACCCCTGTGAAGTg                                        >  2:11297/1‑100 (MQ=255)
                                           ttGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGc                                       >  2:4026637/1‑100 (MQ=255)
                                           ttGGATAAGGCGGGTACGCCGCATCCGACATCCAACGGCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGc                                       <  1:3597390/100‑1 (MQ=255)
                                             ggATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTc                                     <  1:2750838/100‑1 (MQ=40)
                                              gATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCt                                      <  2:1369406/98‑1 (MQ=40)
                                               aTAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCa                                   <  2:1919615/100‑1 (MQ=40)
                                               aTAAGGCGGTTACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTcc                                    <  2:363315/99‑1 (MQ=14)
                                               aTAAGGCCGTTACGTCGCCCCCGACATCGAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAg                                          <  1:983033/93‑1 (MQ=14)
                                                tAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCAc                                  >  2:1824924/1‑100 (MQ=38)
                                                tAAGGCGGGTACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGc                                       <  1:2642075/95‑1 (MQ=2)
                                                   ggCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCAcccc                               >  2:2051764/1‑100 (MQ=38)
                                                   ggCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCAcccc                               >  2:1582292/1‑100 (MQ=35)
                                                     cGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTGCACCCCGt                             >  1:4198198/1‑100 (MQ=25)
                                                      ggTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTa                            >  2:296778/1‑100 (MQ=35)
                                                      ggTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTa                            <  2:3037391/100‑1 (MQ=38)
                                                      ggTTACGCCGCATCCGACATCCAACGGCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTa                            <  2:1857797/100‑1 (MQ=18)
                                                        ttACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAgg                          <  1:347519/100‑1 (MQ=35)
                                                        ccgatctgcATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAgg                          <  2:4154512/93‑1 (MQ=255)
                                                         tACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGt                         >  1:1396220/1‑100 (MQ=35)
                                                           cgccgcATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCGACCCCGTAGGt                         >  1:1615856/1‑98 (MQ=18)
                                                           cgccgcATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTc                        >  2:911003/1‑99 (MQ=32)
                                                             ccgcATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCGGTGAAGTGCTCCGCCCGGTAgggtgga                     >  1:1082282/1‑95 (MQ=11)
                                                              cgcATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGAt                    <  2:1569518/100‑1 (MQ=32)
                                                               gcATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATa                   <  2:996953/100‑1 (MQ=32)
                                                                 aTCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAg                 >  2:145495/1‑100 (MQ=33)
                                                                  tCCGATATCCAACCTCCGAGCCGGTTCCATGATGCGACGCTGGCGCGTCCTATCAGGCGTACACCGCTGTTAAGTGCTCCACCCCGTAGGTCgn                      <  1:3346419/94‑2 (MQ=11)
                                                                   ccGACATCCACCGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGc               <  2:3373859/100‑1 (MQ=18)
                                                                   ccGACATCCAACGTCCGAGCCGGTTGCCTGATGCGATGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCg                       <  1:3711104/92‑1 (MQ=17)
                                                                   ccGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGc               >  2:3844460/1‑100 (MQ=33)
                                                                   ccGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGc               >  2:128478/1‑100 (MQ=33)
                                                                     gACATCCAACGTCCACGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg             <  1:1325488/100‑1 (MQ=12)
                                                                      aCATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGt            <  1:2145980/100‑1 (MQ=32)
                                                                      aCATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGt            <  2:1028800/100‑1 (MQ=32)
                                                                       cATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTCCACCGCTGTGACGTGCTCCACCCCGTAGGTCGGATCAGGCGGtt           >  1:2568943/1‑100 (MQ=255)
                                                                       cATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGtt           <  2:519322/100‑1 (MQ=32)
                                                                         tCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAc         >  2:2604668/1‑100 (MQ=33)
                                                                         tCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAc         >  1:3754015/1‑100 (MQ=33)
                                                                         tCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAc         >  2:332882/1‑100 (MQ=32)
                                                                         tCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAc         >  2:3219941/1‑100 (MQ=32)
                                                                          ccAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTCGCACGCTGTGAGGTGGTCCAGCAGGGAGATCGGGTAAGGCTGtgtcg        >  1:2085874/1‑96 (MQ=2)
                                                                          ccAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGGAGTGCTCCACCCCGTAGGTCGGATACGGCGGTTa          >  1:3159918/1‑98 (MQ=16)
                                                                          ccAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcg        <  2:4269182/100‑1 (MQ=32)
                                                                             aCGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgccg     <  2:343555/100‑1 (MQ=33)
                                                                                tCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCAt  >  1:860897/1‑100 (MQ=11)
                                                                                tCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCAt  >  2:661445/1‑100 (MQ=11)
                                                                                                   |                                                                                
TCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCAT  >  NC_000913/2304718‑2304897

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.