New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3336878 =NA (NA)18 (0.120) 8/168 NT NA intergenic (‑75/+85) ibaG/mlaB acid stress protein; putative BolA family transcriptional regulator/ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component
?NC_000913 3336905 = NA (NA)intergenic (‑102/+58) ibaG/mlaB acid stress protein; putative BolA family transcriptional regulator/ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component

Only 100 of 260 total aligned reads displayed.

CGCTCTGAATTTCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAAC  >  NC_000913/3336779‑3336977
                                                                                                   |                                                                                                   
cGCTCTGAATTTCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCaaaaa                                                                                                     >  1:2979108/1‑100 (MQ=255)
  ctctGAATTTCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGc                                                                                                   >  2:2615962/1‑100 (MQ=255)
   tctGAATTTCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGcc                                                                                                  >  2:1640568/1‑100 (MQ=255)
    attgtataatttgcctgctgatgttctgcctcgttaaattttttcaggccggatatggcgttaaccgcctgtccggcaaacctgcctgcaagtcgAGCCt                                                                                                 >  2:3550002‑M1/96‑100 (MQ=255)
      gAATTTCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCg                                                                                               >  1:4194292/1‑100 (MQ=255)
        aTTTCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCt                                                                                             <  1:3447084/100‑1 (MQ=255)
         tttCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTg                                                                                            >  1:2452254/1‑100 (MQ=255)
            cATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATa                                                                                         >  2:4071546/1‑100 (MQ=255)
            cATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATa                                                                                         <  2:1597660/100‑1 (MQ=255)
            cATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATa                                                                                         >  1:804904/1‑100 (MQ=255)
             attattTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATaa                                                                                        >  1:104785/1‑100 (MQ=255)
             attattTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATaa                                                                                        >  1:2374910/1‑100 (MQ=255)
             attattTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATa                                                                                         <  1:4283453/99‑1 (MQ=255)
              ttattTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATaaa                                                                                       >  1:1557150/1‑100 (MQ=255)
              ttattTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATaaa                                                                                       <  2:400700/100‑1 (MQ=255)
               tattTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAAt                                                                                      <  2:3590922/100‑1 (MQ=255)
                attTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATc                                                                                     >  2:1063649/1‑100 (MQ=255)
                attTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATc                                                                                     >  1:2137737/1‑100 (MQ=255)
                attTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATc                                                                                     <  2:34184/100‑1 (MQ=255)
                    tCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGAc                                                                                 <  1:3021645/100‑1 (MQ=255)
                     ccATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACa                                                                                >  2:1915187/1‑100 (MQ=255)
                       aTGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAg                                                                              >  1:2852412/1‑100 (MQ=255)
                         tgttctgcctcgttaaattttttcaggccggatatggcgttaaccgcctgtccggcaaacctgcctgcaagtcgAGCCTCGCTGATAAATCAGACAAGGc                                                                            >  2:698544‑M1/75‑100 (MQ=255)
                         tgttctgcctcgttaaattttttcaggccggatatggcgttaaccgcctgtccggcaaacctgcctgcaagtcgAGCCTCGCTGATAAATCAGACAAGGc                                                                            >  1:1476074‑M1/75‑100 (MQ=255)
                         gggATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGc                                                                            >  1:220713/1‑100 (MQ=255)
                         gggATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGc                                                                            <  1:205556/100‑1 (MQ=255)
                          gttctgcctcgttaaattttttcaggccggatatggcgttaaccgcctgtccggcaaacctgcctgcaagtcgAGCCTCGCTGATAAATCAGACAAGGCt                                                                           >  2:1003121‑M1/74‑100 (MQ=255)
                           ttctgcctcgttaaattttttcaggccggatatggcgttaaccgcctgtccggcaaacctgcctgcaagtcgAGCCTCGCTGATAAATCAGACAAGGCTc                                                                          >  1:721773‑M1/73‑100 (MQ=255)
                           ttctgcctcgttaaattttttcaggccggatatggcgttaaccgcctgtccggcaaacctgcctgcaagtcgAGCCTCGCTGATAAATCAGACAAGGCTc                                                                          >  1:4080141‑M1/73‑100 (MQ=255)
                           ttctgcctcgttaaattttttcaggccggatatggcgttaaccgcctgtccggcaaacctgcctgcaagtcgAGCCTCGCTGATAAATCAGACAAGGCTc                                                                          >  1:1439049‑M1/73‑100 (MQ=255)
                           tgctgcctcgttaaattttttcaggccggatatggcgttaaccgcctgtccggcaaacctgcctgcaagtcgAGCCTCGCTGATAAATCAGACAAGGCTc                                                                          >  1:2719095‑M1/73‑100 (MQ=255)
                           gATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTc                                                                          >  1:1949987/1‑100 (MQ=255)
                            aTCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAACAAGCCTCGCTAATAAATCAGACAAGGCTCg                                                                         <  1:3568922/100‑1 (MQ=255)
                              cTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGAc                                                                       >  1:1727622/1‑100 (MQ=255)
                              cTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGAc                                                                       >  2:3399352/1‑100 (MQ=255)
                               ttCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACt                                                                      >  1:121278/1‑100 (MQ=255)
                                  aaTCATCAGTTAATAAACCAGCGAAACATCTTAGAGCCAAGTTGAGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgc                                                                   >  1:3283947/1‑100 (MQ=255)
                                   atcatcAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgca                                                                  >  2:2545440/1‑100 (MQ=255)
                                    tcatcaGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgcag                                                                 <  1:1408130/100‑1 (MQ=255)
                                    tcatcaGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgcag                                                                 <  2:627785/100‑1 (MQ=255)
                                    tcatcaGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgcag                                                                 <  1:2035281/100‑1 (MQ=255)
                                     catcgGTTATTAATCCAGCGAAACATCTTAGAGGAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCGGATAACTCAGACAAGGCTCGACTTgccg                                                                 >  1:2642656/1‑97 (MQ=255)
                                     catcaGTTAATAAACCAGCGAAACATCTTAGAGCACAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgcagg                                                                >  1:656876/1‑100 (MQ=255)
                                     catcaGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgcagg                                                                >  1:822953/1‑100 (MQ=255)
                                       tcaGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgcaggca                                                              >  2:2827243/1‑100 (MQ=255)
                                        caGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgcaggcag                                                             >  1:255614/1‑100 (MQ=255)
                                         aGTTAATAAACCAGCGAAACATCTTATAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGcaggcagg                                                            >  2:2679460/1‑100 (MQ=255)
                                         aGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGcaggcagg                                                            <  2:2049870/100‑1 (MQ=255)
                                         aGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGcaggcagg                                                            >  2:2487834/1‑100 (MQ=255)
                                              ataaACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGc                                                       <  2:1080945/100‑1 (MQ=255)
                                                aaaCCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCg                                                     <  2:1880660/100‑1 (MQ=255)
                                                 aaCCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCgg                                                    <  1:3410699/100‑1 (MQ=255)
                                                   gccggatatggcgttaaccgcctgtccggcaaacctgcctgcaagtcgAGCCTCGCTGATAAATCAGACAAGGCACGACTTGCAGGCAGGTTTGcc                                                      >  1:3987723‑M1/49‑96 (MQ=255)
                                                   ccAGCGAAACCTCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCACACTAGGCTCGACTTGCAGGCAGGTTTGCCGGAc                                                  <  1:2892205/100‑1 (MQ=255)
                                                   ccAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGAc                                                  >  1:2265699/1‑100 (MQ=255)
                                                   ccAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGAc                                                  <  1:1675580/100‑1 (MQ=255)
                                                    cAGCGAAACGTCTTAGAGCAACGTTGCGCTGTCCTAAATACGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACa                                                 >  1:1086295/1‑100 (MQ=255)
                                                     aGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAACCCTCGCTGATAAATCAGCCAAGACTCAACTTGCAGTCACGATTGCCGGACa                                                 >  1:2775647/1‑99 (MQ=255)
                                                        gAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGc                                              <  1:3137750/99‑1 (MQ=255)
                                                        gAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCg                                             >  2:1100273/1‑100 (MQ=255)
                                                        gAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTAGCCGGACAGGCg                                             <  2:2896370/100‑1 (MQ=255)
                                                         aaaCATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCgg                                            <  1:769494/100‑1 (MQ=255)
                                                         aaaCATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCgg                                            <  2:1543752/100‑1 (MQ=255)
                                                            cATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTa                                         >  2:3686491/1‑100 (MQ=255)
                                                            cATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCCGACAGGCGGTTa                                         >  2:1041103/1‑100 (MQ=255)
                                                              tCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAAc                                       >  2:618464/1‑100 (MQ=255)
                                                               cTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACg                                      <  2:3029669/100‑1 (MQ=255)
                                                                 tAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGcc                                    <  2:2188663/100‑1 (MQ=255)
                                                                 tAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGcc                                    <  1:3220672/100‑1 (MQ=255)
                                                                  agagCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCa                                   <  2:4120477/100‑1 (MQ=255)
                                                                   gagCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACATGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCat                                  >  1:378514/1‑100 (MQ=255)
                                                                      cAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATc                               >  1:1028076/1‑100 (MQ=255)
                                                                        aaGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCg                             >  1:3625651/1‑100 (MQ=255)
                                                                         aGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCgg                            <  1:4347835/100‑1 (MQ=255)
                                                                         aGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCgg                            <  2:2466016/100‑1 (MQ=255)
                                                                          gTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGc                           <  1:941484/100‑1 (MQ=255)
                                                                           ttGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGc                           <  2:3343580/99‑1 (MQ=255)
                                                                            tGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCt                         >  1:732796/1‑100 (MQ=255)
                                                                              cgcTGGCATAAATAATCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGa                       <  2:4342919/100‑1 (MQ=255)
                                                                              cgcTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGATCGACATGCAGGTAGATTTGCCGAACAGGCGGTTAACGCAATATCCGGCCTGa                       >  1:1362787/1‑100 (MQ=255)
                                                                                cTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaa                     >  2:2341925/1‑100 (MQ=255)
                                                                                 tGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGATAGGCGGTTAACGCCATATCCGGCCTGaaa                     <  2:1409482/99‑1 (MQ=255)
                                                                                 tGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaaa                    <  2:958566/100‑1 (MQ=255)
                                                                                   gCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaaaaa                  >  1:1531541/1‑100 (MQ=255)
                                                                                   gCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaaaaa                  >  2:2520320/1‑100 (MQ=255)
                                                                                   gCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaaaaa                  <  1:3642007/100‑1 (MQ=255)
                                                                                   gCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGATTAGCCGGATAGGCGGTTAACGCCATATCCGGCCTGaaaaaa                  >  1:3089944/1‑100 (MQ=255)
                                                                                    cATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAt                 <  2:1733983/100‑1 (MQ=255)
                                                                                    cATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAt                 <  1:3895934/100‑1 (MQ=255)
                                                                                    cATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAt                 <  2:233701/100‑1 (MQ=255)
                                                                                     ataaataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAtt                >  2:2636485/1‑100 (MQ=255)
                                                                                     ataaataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAtt                <  2:2122361/100‑1 (MQ=255)
                                                                                      taaataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAttt               <  2:1218746/100‑1 (MQ=255)
                                                                                      taaataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAttt               >  2:2749566/1‑100 (MQ=255)
                                                                                          caaGCAAAAAGCCTCGCTGATAAAGCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACg           <  1:381232/99‑1 (MQ=255)
                                                                                             gtaaaaaGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAgg        >  2:2992615/3‑100 (MQ=255)
                                                                                             gCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAgg        <  2:3924024/100‑1 (MQ=255)
                                                                                             gCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAgg        >  2:845736/1‑100 (MQ=255)
                                                                                              cAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGc       <  2:1466173/100‑1 (MQ=255)
                                                                                                 aaaGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGa    >  1:4015058/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
CGCTCTGAATTTCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAAC  >  NC_000913/3336779‑3336977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.