New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4386017NA (NA)19 (0.130) 12/164 NT NA coding (314/315 nt) yjeO inner membrane protein
?NC_000913 = 4386039 NA (NA)intergenic (+21/+8) yjeO/mscM inner membrane protein/mechanosensitive channel protein, miniconductance

Only 100 of 243 total aligned reads displayed.

TGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGG  >  NC_000913/4385918‑4386116
                                                                                                   |                                                                                                   
 gtgGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGa                                                                                                    <  2:2533255/100‑1 (MQ=255)
 gtgGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGa                                                                                                    >  1:3025323/1‑100 (MQ=255)
  tgGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAg                                                                                                   <  2:2087816/100‑1 (MQ=255)
   ggCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGc                                                                                                  >  2:2804562/1‑100 (MQ=255)
    gCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGcc                                                                                                 >  2:3537491/1‑100 (MQ=255)
        aaaaaaCGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGAt                                                                                             >  2:1506903/1‑100 (MQ=255)
         aaaaaCGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGAtt                                                                                            <  2:2956056/100‑1 (MQ=255)
         aaaaaCGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGAtt                                                                                            <  2:4170568/100‑1 (MQ=255)
          aaaaCGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTg                                                                                           <  2:4318964/100‑1 (MQ=255)
           aaaCGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTgg                                                                                          >  1:2199553/1‑100 (MQ=255)
             aCGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTGTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGtt                                                                                        <  2:3590936/100‑1 (MQ=255)
              cgcgGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGtt                                                                                        <  1:3557671/99‑1 (MQ=255)
                cgGCTGGTTTATGTACGCCACCGGGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCa                                                                                      <  1:2740582/99‑1 (MQ=255)
                 ggCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTTTTTTTTTTTAGTTTTGTTTGTGAGCCGGCTTGGTTCAt                                                                                     >  1:1395464/1‑99 (MQ=255)
                 ggCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATc                                                                                    >  2:624646/1‑100 (MQ=255)
                   cTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCg                                                                                  <  2:2596221/100‑1 (MQ=255)
                     cttttATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGc                                                                                <  1:1924457/98‑1 (MQ=255)
                        ttATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAca                                                                             <  1:2404668‑M2/100‑3 (MQ=255)
                        ttATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAca                                                                             <  2:1910186‑M2/100‑3 (MQ=255)
                         tATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGtgccggatgaaccaatccggctcac                                                                            <  1:4365239‑M1/100‑26 (MQ=255)
                         tATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcac                                                                            >  2:137901‑M2/1‑97 (MQ=255)
                          aTGTACGCCACCGCGCTGTCTGTTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTCTTTGTGtgccggatgaacaaatcccgctcac                                                                            <  1:1337322‑M1/99‑26 (MQ=255)
                          aTGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGagccggatgaaccaatccggctcaca                                                                           <  2:3945233‑M1/100‑27 (MQ=255)
                          aTGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcaca                                                                           >  1:733379‑M2/1‑96 (MQ=255)
                           tGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcacaa                                                                          <  1:744554‑M2/100‑6 (MQ=255)
                            gTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGtgccggatgaaccaatccggctcacaaa                                                                         <  1:1559504‑M1/100‑29 (MQ=255)
                             tACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcacaaac                                                                        <  2:1168079‑M2/100‑8 (MQ=255)
                             tACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcacaaac                                                                        >  2:4197136‑M2/1‑93 (MQ=255)
                               cGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaactt                                                                      >  2:1948303/1‑100 (MQ=255)
                                  cACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttaca                                                                   <  2:2745450/100‑1 (MQ=255)
                                  cACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttaca                                                                   <  1:2935040/100‑1 (MQ=255)
                                  cACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTCGTGAGCCGGATTGGTTCATCCGGCACacaaacttaca                                                                   <  1:2345116/100‑1 (MQ=255)
                                    ccGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttacaaa                                                                 <  1:1740581/100‑1 (MQ=255)
                                     cgcgCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttacaaac                                                                <  1:2138568/100‑1 (MQ=255)
                                      gcgcTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttacaaact                                                               >  1:56226/1‑100 (MQ=255)
                                      gcgcTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACacaaacttacaaact                                                               <  1:247740/100‑1 (MQ=255)
                                         cTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTcc                                                            <  2:3025340/100‑1 (MQ=255)
                                           ggCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTTTTTTTTTTTTTTTTTGTTTGTGAGCCGGATTGGTTCGTCCGGCACACAAACTTACAAACTTccc                                                           >  1:4392309/1‑99 (MQ=255)
                                             cTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGcc                                                        <  1:4213855/100‑1 (MQ=255)
                                             cTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGcc                                                        <  2:3319099/100‑1 (MQ=255)
                                             cTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGcc                                                        <  2:4027715/100‑1 (MQ=255)
                                               aTTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGTGCTATAAGTTTTGTTTGTGAGCCGGATTGGTGCATTCGGCCCACAAACTTACAAACTTCCCGCCTg                                                      >  1:1889039/1‑100 (MQ=255)
                                                ttttCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTga                                                     >  2:4213761/1‑100 (MQ=255)
                                                    cGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTgacgac                                                 <  2:1632696/100‑1 (MQ=255)
                                                        tACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCttt                                             >  2:576723/1‑100 (MQ=255)
                                                         aCTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTg                                            >  1:895897/1‑100 (MQ=255)
                                                         aCTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTg                                            >  2:2430650/1‑100 (MQ=255)
                                                           tGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGcc                                          <  1:1805189/100‑1 (MQ=255)
                                                           tGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGcc                                          <  1:3623041/100‑1 (MQ=255)
                                                            ggCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGccc                                         >  2:1047092/1‑100 (MQ=255)
                                                            ggCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGccc                                         >  2:542736/1‑100 (MQ=255)
                                                                gtgGCAGTTTTTTCTGCGCTATCGGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCa                                      >  1:442458/1‑99 (MQ=255)
                                                                gtgGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAg                                     >  2:861117/1‑100 (MQ=255)
                                                                gtgGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAg                                     <  2:3740277/100‑1 (MQ=255)
                                                                gtgGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAg                                     <  2:1869308/100‑1 (MQ=255)
                                                                gtgGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAg                                     <  2:3833789/100‑1 (MQ=255)
                                                                  ggCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGAc                                   >  2:617206/1‑100 (MQ=255)
                                                                   gCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAATCTTCCCGCCTGACGACCTTTGCCCGCAGACg                                  <  1:1022177/100‑1 (MQ=255)
                                                                   gCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACg                                  <  2:1360642/100‑1 (MQ=255)
                                                                      gTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCa                               <  1:157377/100‑1 (MQ=255)
                                                                      gTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCa                               >  1:3228925/1‑100 (MQ=255)
                                                                       ttttttCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccga                              <  1:62341‑M2/100‑50 (MQ=255)
                                                                             cTGCGCTATCAGTTTTGTTTGCGAGCCGGCTTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCGGCAGACATCAGCGTtc                         >  1:277954/1‑99 (MQ=255)
                                                                              tGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTtctc                       >  2:937641/1‑100 (MQ=255)
                                                                               gcgcTATCAGTTTTGTTTGTGATCCGCATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTcc                      <  1:3874686/100‑1 (MQ=255)
                                                                               gcgcTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTcc                      >  2:4121338/1‑100 (MQ=255)
                                                                               gcgcTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTcc                      <  2:3228942/100‑1 (MQ=255)
                                                                                 gcTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTcccc                    >  1:1271128/1‑100 (MQ=255)
                                                                                  cTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCg                   >  2:3132793/1‑100 (MQ=255)
                                                                                    agcAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCACACGTCAGCGTTCTCCCCgtt                 <  1:2697176/98‑1 (MQ=255)
                                                                                      cAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCgtttg               >  1:1034724/1‑100 (MQ=255)
                                                                                       aGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGCCCTTTGCCCGCAGACGTCAGCGTTCTCCCCgtttgt              >  2:3086511/1‑100 (MQ=255)
                                                                                       aGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCgtttgt              >  1:1153658/1‑100 (MQ=255)
                                                                                       aGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCgtttgt              >  2:459771/1‑100 (MQ=255)
                                                                                        gTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtg             <  2:2806211‑M2/100‑67 (MQ=255)
                                                                                        gTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtg             <  2:3253229‑M2/100‑67 (MQ=255)
                                                                                        gTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtg             <  2:2042111‑M2/100‑67 (MQ=255)
                                                                                        gTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCgtttgtt             <  2:3960883/100‑1 (MQ=255)
                                                                                         ttttGTTTGTGAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtgg            <  1:1304376‑M2/100‑68 (MQ=255)
                                                                                          tttgtttgTGAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggc           <  2:2915720‑M2/100‑69 (MQ=255)
                                                                                          tttgtttgTGAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcccggtggc           <  1:1287431‑M2/100‑69 (MQ=255)
                                                                                          tttgtttgTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTa           <  2:212381/100‑1 (MQ=255)
                                                                                            tgtttgtGAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgt         <  1:4057858‑M2/100‑71 (MQ=255)
                                                                                            tgtttgtGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTAcc         >  2:2353861/1‑100 (MQ=255)
                                                                                             gtttgtGtgccggatgaaccaatccggctcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgta        >  2:1807899‑M1/1‑7 (MQ=255)
                                                                                             gtttgtGAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgta        <  2:3790980‑M2/100‑72 (MQ=255)
                                                                                             gtttgtGAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgta        <  1:3174467‑M2/100‑72 (MQ=255)
                                                                                             gtttgtGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCg        >  2:4374999/1‑100 (MQ=255)
                                                                                              tttgtGtgccggatgaaccaatccggctcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtac       <  2:371919‑M1/100‑95 (MQ=255)
                                                                                              tttgtGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTATACCGt       >  1:3390246/1‑100 (MQ=255)
                                                                                               ttgtGtgccggatgaaccaatccggctcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtaca      <  1:525883‑M1/100‑96 (MQ=255)
                                                                                               ttgtGtgccggatgaaccaatccggctcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtaca      >  2:2904263‑M1/1‑5 (MQ=255)
                                                                                               ttgtGAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtaca      <  2:3377602‑M2/100‑74 (MQ=255)
                                                                                               ttgtGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGtt      >  2:3207125/1‑100 (MQ=255)
                                                                                                 gtgtgccggatgaaccaatccggctcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtacata    <  2:1505907‑M1/100‑98 (MQ=255)
                                                                                                 gtgtgccggatgaaccaatccggctcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtacata    <  2:2887854‑M1/100‑98 (MQ=255)
                                                                                                 gtgAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGa    >  1:2510027/1‑100 (MQ=255)
                                                                                                  ngAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAg   >  1:3513444/2‑100 (MQ=255)
                                                                                                   gAGCCGGATTGGTTCATCCGGCTcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtacataaa  <  1:632437‑M2/100‑78 (MQ=255)
                                                                                                   gAGCCGGATTGGTTCATCCGGCAcacaaacaaaactgatagcgcagaaaaaactgccacagccagtagccgaaaatagccagcgcggtggcgtacataaa  <  1:2119512‑M2/100‑78 (MQ=255)
                                                                                                   |                                                                                                   
TGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATTGGTTCATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGG  >  NC_000913/4385918‑4386116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.