New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4607047171 (1.080)14 (0.090) 6/168 NT 8.0% coding (654/1032 nt) rsmC 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent
?NC_000913 = 4607088 161 (1.080)coding (613/1032 nt) rsmC 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent
Rejected: Frequency below cutoff threshold.

Only 100 of 226 total aligned reads displayed.

GGCAAAGACTTCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGG  >  NC_000913/4606948‑4607146
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ggCAAAGACTTCACCTTCAACACCGTTGGCCACAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGC                                                                                                     >  2:2101344‑M1/1‑100 (MQ=255)
 gCAAAGACTTCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCg                                                                                                    <  1:209344/100‑1 (MQ=255)
  cAAAGACTTCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGa                                                                                                   >  1:3450999/1‑100 (MQ=255)
  cAAAGACTTCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGa                                                                                                   >  2:2917172/1‑100 (MQ=255)
   aaaGACTTCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGaa                                                                                                  <  1:1022943/100‑1 (MQ=255)
    aaGACTTCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAAt                                                                                                 <  1:3960377/100‑1 (MQ=255)
        cTTCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGgcg                                                                                             <  2:3151797/100‑1 (MQ=255)
         ttCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGgcgc                                                                                            >  1:1920444/1‑100 (MQ=255)
         ttCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGgcgc                                                                                            >  2:843451/1‑100 (MQ=255)
           cACCTTGGAGACCGTTGGACGGAAGTGGTGCTCGGCTGGCTTCTACCGCCGGTGCAGAGACAGCGCACAAGGTGAGACGAATTGTCGGCGAATGgcg                                                                                             <  1:4083053/97‑1 (MQ=255)
            aCCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCa                                                                                         <  2:4049240/100‑1 (MQ=255)
             ccTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCaa                                                                                        >  1:3600009/1‑100 (MQ=255)
             ccTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCaa                                                                                        >  2:1142736/1‑100 (MQ=255)
                tCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAgg                                                                                     <  2:2862915/100‑1 (MQ=255)
                tCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAgg                                                                                     <  1:275989/100‑1 (MQ=255)
                  aaCACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCTGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCa                                                                                   <  2:3760887/100‑1 (MQ=255)
                  aaCACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCa                                                                                   >  2:3923812/1‑100 (MQ=255)
                  aaCACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCa                                                                                   <  2:1383912/100‑1 (MQ=255)
                   acacCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATCTTCGGCGAATGGCGCGCAAAAGCaa                                                                                  >  1:4026103/1‑100 (MQ=255)
                    cacCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAAc                                                                                 <  2:3903201/100‑1 (MQ=255)
                      ccGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTg                                                                               >  1:556557/1‑100 (MQ=255)
                      ccGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTg                                                                               <  1:2196191/100‑1 (MQ=255)
                       cGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAGTGGCGCGCAAAGGCAACTGa                                                                              >  2:3679266/1‑100 (MQ=255)
                        gTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGaa                                                                             <  1:694767/100‑1 (MQ=255)
                         ttGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGaaa                                                                            <  2:553054/100‑1 (MQ=255)
                          tGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAg                                                                           <  1:802940/100‑1 (MQ=255)
                           ggCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAg                                                                           <  1:4214015/99‑1 (MQ=255)
                           ggCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGc                                                                          <  1:3547996/100‑1 (MQ=255)
                           ggCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGc                                                                          >  1:1087749/1‑100 (MQ=255)
                            gCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCa                                                                         >  1:2498391/1‑100 (MQ=255)
                            gCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCa                                                                         <  2:254497/100‑1 (MQ=255)
                             ccGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCAc                                                                        >  2:1241938/1‑100 (MQ=255)
                                   gtgtTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCcgc                                                                  >  1:3985312/1‑100 (MQ=255)
                                         cgcgGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCcaca                                                            <  2:613566/100‑1 (MQ=255)
                                            ggctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCtgtggcgcgggcgtgctttcagttgcctttgcgcgccattcgcc                                                         <  1:1424098‑M1/100‑45 (MQ=255)
                                            ggctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCtgtggcgcgggcgtgctttcagttgcctttgcgcgccattcgcc                                                         <  1:2054278‑M1/100‑45 (MQ=255)
                                            ggctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCgaatggcgcgggcgtgctttcagttgcctttgcgcgccattcgn                                                         <  1:4290210‑M1/100‑45 (MQ=255)
                                             gctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACGGAAAGCACGCCCGCGCCACAgccg                                                        <  2:4378823‑M2/100‑5 (MQ=255)
                                              ctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCgaatggcgcgggcgtgctttcagttgcctttgcgcgccattcgccg                                                       <  1:2745623‑M1/100‑47 (MQ=255)
                                                ggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACa                                                     >  1:990248/1‑100 (MQ=255)
                                                ggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACGGAAAGCACGCCCGCGCCACAGCCGACa                                                     >  2:3301583/1‑100 (MQ=255)
                                                  ctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATc                                                   >  2:4205015/1‑100 (MQ=255)
                                                   ttCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATcc                                                  <  2:2416882/100‑1 (MQ=255)
                                                     cTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAg                                                >  2:1268346/1‑100 (MQ=255)
                                                      tACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGc                                               >  1:484660/1‑100 (MQ=255)
                                                       aCCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCa                                              <  1:3055266/100‑1 (MQ=255)
                                                        ccgccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCAc                                             >  2:2668950/1‑100 (MQ=255)
                                                        ccgccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCAc                                             <  2:1526799/100‑1 (MQ=255)
                                                        ccgccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCAc                                             >  2:1303390/1‑100 (MQ=255)
                                                        ccgccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCAc                                             >  2:1274319/1‑100 (MQ=255)
                                                          gccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCAc                                             <  1:2411261/98‑1 (MQ=255)
                                                           ccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACttt                                          >  1:1367052/1‑100 (MQ=255)
                                                              gggCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTAcc                                       >  2:3226438/1‑100 (MQ=255)
                                                              gggCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTAcc                                       <  1:3017840/100‑1 (MQ=255)
                                                                 cAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCttt                                    <  1:3737666/100‑1 (MQ=255)
                                                                  agagACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTc                                   >  2:902672/1‑100 (MQ=255)
                                                                  agagACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTc                                   <  1:3794391/100‑1 (MQ=255)
                                                                   gagaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCg                                  <  2:647192/100‑1 (MQ=255)
                                                                    agaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgt                                 >  2:2163379/1‑100 (MQ=255)
                                                                     gaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtg                                <  2:2751394/100‑1 (MQ=255)
                                                                       cATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtgt                               <  2:711122/99‑1 (MQ=255)
                                                                       cATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGtgtg                              >  1:2465776/1‑100 (MQ=255)
                                                                       cATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGtgtg                              >  1:73182/1‑100 (MQ=255)
                                                                        aTCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGc                             >  2:2149831/1‑100 (MQ=255)
                                                                         tCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCg                            <  2:2452261/100‑1 (MQ=255)
                                                                         tCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCg                            >  2:2710357/1‑100 (MQ=255)
                                                                          cGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCgg                           <  1:533847/100‑1 (MQ=255)
                                                                           gCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGa                          >  2:4371955/1‑100 (MQ=255)
                                                                                 ggTGAGACGAATTTTCGGAGAGTGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCGACGGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAAc                    >  1:3267121/1‑100 (MQ=255)
                                                                                   tGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGt                  >  2:4101050/1‑100 (MQ=255)
                                                                                   tGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGt                  <  1:2849178/100‑1 (MQ=255)
                                                                                   tGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTCTACCTCTCGTCTGCGGCGTTACCg                   >  1:1442688/1‑99 (MQ=255)
                                                                                     agaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCg                <  2:4363286/100‑1 (MQ=255)
                                                                                      gaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCga               >  2:1872648/1‑100 (MQ=255)
                                                                                       aCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCgag              <  2:1057351/100‑1 (MQ=255)
                                                                                        cGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCgaga             <  2:3114845/100‑1 (MQ=255)
                                                                                         gAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGagag            <  2:3474290/100‑1 (MQ=255)
                                                                                         gAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGagag            <  2:466788/100‑1 (MQ=255)
                                                                                         gAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGagag            <  2:2498403/100‑1 (MQ=255)
                                                                                          aaTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagc           >  1:1618747/1‑100 (MQ=255)
                                                                                          aaTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagc           <  2:4394788/100‑1 (MQ=255)
                                                                                           aTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaag          <  1:1104563‑M2/100‑51 (MQ=255)
                                                                                           aTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaag          <  1:218503‑M2/100‑51 (MQ=255)
                                                                                           aTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagca          <  2:3598207/100‑1 (MQ=255)
                                                                                            ttttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagcag         <  1:3134017/100‑1 (MQ=255)
                                                                                             tttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagcagc        <  1:1548053/100‑1 (MQ=255)
                                                                                              ttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAgcagca       <  1:3278263/100‑1 (MQ=255)
                                                                                              ttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAgcagca       <  2:3833272/100‑1 (MQ=255)
                                                                                               tCGGCtgtggcgcgggcgtgctttcagttgcctttgcgcgccattcgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccag      >  1:3054982‑M1/1‑5 (MQ=255)
                                                                                                cGGCtgtggcgcgggcgtgctttcagttgccgttgcgcgccattcgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccag      <  1:554001‑M1/99‑96 (MQ=255)
                                                                                                cGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagc     <  1:2200207‑M2/100‑56 (MQ=255)
                                                                                                 gtcgaATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCATTcgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagc    <  2:2990232‑M2/98‑57 (MQ=255)
                                                                                                 ggCtgtggcgcgggcgtgctttcagttgcctttgcgcgccattcgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagcc    >  1:1186876‑M1/1‑3 (MQ=255)
                                                                                                 ggCtgtggcgcgggcgtgctttcagttgcctttgcgcgccattcgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagcc    >  1:4359274‑M1/1‑3 (MQ=255)
                                                                                                 ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCATTcgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagc    <  1:617448‑M2/100‑57 (MQ=255)
                                                                                                 ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagcc    <  1:2671575‑M2/100‑57 (MQ=255)
                                                                                                 ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagcc    <  2:4027011‑M2/100‑57 (MQ=255)
                                                                                                 ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACt    >  1:519816/1‑100 (MQ=255)
                                                                                                 ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACt    >  1:2512820/1‑100 (MQ=255)
                                                                                                   cGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTgg  >  1:1770203/1‑100 (MQ=255)
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GGCAAAGACTTCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGG  >  NC_000913/4606948‑4607146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.