BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4636324 =	180 (1.140)	9 (0.060)	5/164	NT	5.4%	coding (318/690 nt)	creB	response regulator in two‑component regulatory system with CreC
*	?	NC_000913	4636375 =	148 (1.020)	9 (0.060)	5/164	NT	5.4%	coding (369/690 nt)	creB	response regulator in two‑component regulatory system with CreC
Rejected: Frequency below cutoff threshold.

Only 100 of 223 total aligned reads displayed.

TCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTG  >  NC_000913/4636225‑4636423

tCCGGCGTTACCTGTACTGTTCCTGGCGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGttt                                                                                                     <  2:3362017/100‑1 (MQ=255)

tCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGttt                                                                                                     <  2:1730446/100‑1 (MQ=255)

 tcagcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttctt                                                                                                    >  2:2914052‑M1/99‑100 (MQ=255)

 ccGGGGTTACCTGTACTGTTCCTGACGGCCCGAATTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGttt                                                                                                     <  1:4010653/99‑1 (MQ=255)

 ccGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGtttt                                                                                                    <  2:2488940/100‑1 (MQ=255)

  cagcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgaggggagacggcgtcgagaacttctt                                                                                                    <  1:704119‑M1/2‑1 (MQ=255)

   ggCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTc                                                                                                   <  1:4100343/99‑1 (MQ=255)

   agcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCa                                                                                                  <  2:686644‑M1/4‑1 (MQ=255)

    gcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCAc                                                                                                 >  2:3763661‑M1/96‑100 (MQ=255)

        tACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCcg                                                                                             >  1:4257606/1‑100 (MQ=255)

         aCCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCcgc                                                                                            >  2:310908/1‑100 (MQ=255)

          ccTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCcgcg                                                                                           >  2:3926194/1‑100 (MQ=255)

          ccTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCcgcg                                                                                           >  1:2115328/1‑100 (MQ=255)

          ccTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCcgcg                                                                                           <  2:1415534/100‑1 (MQ=255)

          ccTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCcgcg                                                                                           <  2:1549229/100‑1 (MQ=255)

           cTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGa                                                                                          >  1:2663101/1‑100 (MQ=255)

            tGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGaa                                                                                         >  1:1131937/1‑100 (MQ=255)

             gTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAg                                                                                        <  1:2035490/100‑1 (MQ=255)

             gTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAg                                                                                        <  1:1184052/100‑1 (MQ=255)

               aCTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAgtg                                                                                      <  1:1582540/100‑1 (MQ=255)

               aCTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAgtg                                                                                      <  2:3433921/100‑1 (MQ=255)

                cTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAgtgt                                                                                     >  2:2123123/1‑100 (MQ=255)

                 tGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGTAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGtgtg                                                                                    <  1:2471567/100‑1 (MQ=255)

                  gTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTgc                                                                                   >  1:2228840/1‑100 (MQ=255)

                  gTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTgc                                                                                   >  2:1205514/1‑100 (MQ=255)

                  gTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTgc                                                                                   >  1:988239/1‑100 (MQ=255)

                    tCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTgcgc                                                                                 <  1:579951/100‑1 (MQ=255)

                     ccTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGcc                                                                                >  1:1706183/1‑100 (MQ=255)

                      cTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCa                                                                               >  2:574435/1‑100 (MQ=255)

                       tGACGGCCCGAAGTGGAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAg                                                                              >  1:1056713/1‑100 (MQ=255)

                       tGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAg                                                                              >  1:3693661/1‑100 (MQ=255)

                        ggcGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTgcg                                                                                  <  1:3372113/93‑1 (MQ=255)

                           ggCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTg                                                                          >  2:1800244/1‑100 (MQ=255)

                            gCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTgc                                                                         <  2:3024844/100‑1 (MQ=255)

                                gAAGTGAAGAGGTCGATCGCCTGCTTAGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCAc                                                                     >  2:2671691/1‑100 (MQ=255)

                                     gAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTAc                                                                <  2:1040248/100‑1 (MQ=255)

                                        gagGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGGCGACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTg                                                              <  1:956658/99‑1 (MQ=255)

                                          ggTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGt                                                           >  2:3908038/1‑100 (MQ=255)

                                          ggTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGt                                                           >  2:4317121/1‑100 (MQ=255)

                                          ggTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGt                                                           >  1:2553746/1‑100 (MQ=255)

                                           gTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTc                                                          >  1:4342958/1‑100 (MQ=255)

                                             cGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgg                                                        <  2:4024056/100‑1 (MQ=255)

                                              gATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCggg                                                       <  2:440494/100‑1 (MQ=255)

                                              gATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCggg                                                       <  2:59909/100‑1 (MQ=255)

                                              gATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCggg                                                       <  2:2010878/100‑1 (MQ=255)

                                               aTCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGt                                                      <  2:2953751/100‑1 (MQ=255)

                                                tCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTg                                                     <  1:397662/100‑1 (MQ=255)

                                                 cGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTga                                                    >  2:2808330/1‑100 (MQ=255)

                                                 cGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTga                                                    >  1:1778276/1‑100 (MQ=255)

                                                  gCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaa                                                   >  1:3760642/1‑100 (MQ=255)

                                                  gCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaa                                                   >  1:3195648/1‑100 (MQ=255)

                                                   ccTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaag                                                  <  2:1090831/100‑1 (MQ=255)

                                                   ccTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaag                                                  >  2:2905210/1‑100 (MQ=255)

                                                   aattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaag                                                  >  2:2572877‑M1/49‑100 (MQ=255)

                                                    cTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaaga                                                 <  2:3188195/100‑1 (MQ=255)

                                                    attcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTGCTGTGTCGGGTgaaga                                                 >  1:3016753‑M1/48‑100 (MQ=255)

                                                     tGCTTGGGCTGGAAATTGGTGCTGACGACTACGTTGCTAAAGCGTTTTCACCCGGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTga                                                    <  1:2515823/96‑1 (MQ=255)

                                                      gCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGaagaag                                               <  1:3884028/100‑1 (MQ=255)

                                                       cTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGt                                              <  2:2282344/100‑1 (MQ=255)

                                                           ggCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTtctc                                          <  1:2322333/100‑1 (MQ=255)

                                                           gacTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTtctc                                          >  2:3818053/3‑100 (MQ=255)

                                                            gCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCg                                         <  2:3832168/100‑1 (MQ=255)

                                                            gCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCg                                         <  1:1359027/100‑1 (MQ=255)

                                                            gCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCg                                         <  2:2530474/100‑1 (MQ=255)

                                                             cTGGAAATTGCTGCTGACGAATGCGTGGGTAAACCGTTTCCACCTCGCGAAGTTTGCGCCAGGGTGCGAAACTTAAGGCCTCGGGTGAAGAAGTTCCCGa                                        <  1:3301430/100‑1 (MQ=255)

                                                              tGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTATCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGAc                                       >  1:2347645/1‑100 (MQ=255)

                                                               ggAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACg                                      <  2:2553759/100‑1 (MQ=255)

                                                               ggAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACg                                      >  2:1988497/1‑100 (MQ=255)

                                                                 aaaTTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGcc                                    >  1:2875994/1‑100 (MQ=255)

                                                                    ttGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGtc                                 >  2:1184894/1‑100 (MQ=255)

                                                                        tGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTccc                             >  2:4323515/1‑100 (MQ=255)

                                                                            gacgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCa                         >  1:360211/1‑100 (MQ=255)

                                                                            gacgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCa                         <  2:360212/100‑1 (MQ=255)

                                                                               gacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATcc                      <  2:2716588/100‑1 (MQ=255)

                                                                               gacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATcc                      >  1:461576/1‑100 (MQ=255)

                                                                                   aCGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTAt                  <  2:193181/100‑1 (MQ=255)

                                                                                   aCGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCACACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTAt                  >  1:2702434/1‑100 (MQ=255)

                                                                                     gTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTg                >  2:4051616/1‑100 (MQ=255)

                                                                                      tGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTgg               >  2:2882362/1‑100 (MQ=255)

                                                                                      tGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTgg               <  2:2213103/100‑1 (MQ=255)

                                                                                      tGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTg                <  2:421950/99‑1 (MQ=255)

                                                                                       ggCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGa              <  2:1474790/100‑1 (MQ=255)

                                                                                       ggCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCGTACTGGGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTgg               <  2:1032655/99‑1 (MQ=255)

                                                                                         cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa            >  2:3700970/1‑100 (MQ=255)

                                                                                         cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa            >  1:3137329/1‑100 (MQ=255)

                                                                                         cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa            >  2:3674758/1‑100 (MQ=255)

                                                                                          tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAt           >  1:2199172/1‑100 (MQ=255)

                                                                                           aaaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtt          >  1:1040789/1‑100 (MQ=255)

                                                                                           aaaCCGTTTTCACCCCGCGAAGTGTGCGCCAGAGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGCCTCCCGTCATACGTATTGGACa            >  1:823410/1‑98 (MQ=255)

                                                                                            aaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAttt         <  1:765599/100‑1 (MQ=255)

                                                                                            aaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAttt         <  1:1943719/100‑1 (MQ=255)

                                                                                             aCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtttt        <  2:4114646/100‑1 (MQ=255)

                                                                                             aCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtttt        >  2:2755705/1‑100 (MQ=255)

                                                                                              ccGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttg       >  1:1667101/1‑100 (MQ=255)

                                                                                              ccGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttg       <  1:2989886/100‑1 (MQ=255)

                                                                                                gTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaa     <  1:638155/100‑1 (MQ=255)

                                                                                                 ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat    <  2:740039/100‑1 (MQ=255)

                                                                                                 ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat    <  2:3195665/100‑1 (MQ=255)

                                                                                                 ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat    <  1:3849233/100‑1 (MQ=255)

                                                                                                  tttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat    <  2:3582194/99‑1 (MQ=255)

TCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTG  >  NC_000913/4636225‑4636423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.