New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 374930 =NA (NA)16 (0.110) 8/164 NT NA noncoding (1/436 nt) REP31 (repetitive extragenic palindromic) element; contains 9 REP sequences REP31 (repetitive extragenic palindromic) element; contains 9 REP sequences
?NC_000913 2842453 = NA (NA)noncoding (31/79 nt) REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 273 total aligned reads displayed.

CAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGAC  >  NC_000913/374831‑375029
                                                                                                   |                                                                                                   
cagggatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagg                                                                                                     >  1:4194415‑M1/100‑100 (MQ=255)
  gggatgttcttgatggggtgaaccagctctgatgccaaaggctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGcc                                                                                                   >  2:1519216‑M1/98‑100 (MQ=255)
  ggaggaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGcc                                                                                                   >  1:622904/1‑100 (MQ=255)
  ggaggaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGcc                                                                                                   >  1:694268/1‑100 (MQ=255)
  ggaggaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGcc                                                                                                   >  2:3178417/1‑100 (MQ=255)
   gaggaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCACCACGACTGCCg                                                                                                  <  1:1966589/100‑1 (MQ=255)
    gatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCgg                                                                                                 >  1:3107771‑M1/96‑100 (MQ=255)
    gatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCgg                                                                                                 <  1:4171169‑M1/5‑1 (MQ=255)
    gatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCg                                                                                                  <  1:2470997‑M1/4‑1 (MQ=255)
    aggaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCgg                                                                                                 >  1:1787635/1‑100 (MQ=255)
    aggaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCgg                                                                                                 >  2:2585277/1‑100 (MQ=255)
        tatGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATgc                                                                                             <  1:4015243/100‑1 (MQ=255)
          tGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATgcgg                                                                                           >  2:714127/1‑100 (MQ=255)
          tGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATgcgg                                                                                           >  1:739017/1‑100 (MQ=255)
          tGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATgcgg                                                                                           >  1:208870/1‑100 (MQ=255)
          tGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATgcgg                                                                                           >  2:3315708/1‑100 (MQ=255)
          tGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATgcgg                                                                                           <  1:4357618/100‑1 (MQ=255)
            aTCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATgcggcg                                                                                         <  1:1304498/100‑1 (MQ=255)
            aTCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATgcggcg                                                                                         <  2:3710692/100‑1 (MQ=255)
            aTCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATACCAGCACGACTACCGGATgcggc                                                                                          >  1:607247/1‑99 (MQ=255)
             tCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGt                                                                                        <  2:804903/100‑1 (MQ=255)
                  gACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACg                                                                                   >  2:940665/1‑100 (MQ=255)
                  gACGTCGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGa                                                                                      <  2:3956416/97‑1 (MQ=255)
                    cGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGcc                                                                                 <  2:736500/100‑1 (MQ=255)
                    cGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGcc                                                                                 <  1:1085676/100‑1 (MQ=255)
                      tGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCtn                                                                               <  1:1423282/100‑2 (MQ=255)
                       ggCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTa                                                                              >  2:1822121/1‑100 (MQ=255)
                       ggCGCTGCATCCGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTa                                                                              >  1:2301357/1‑100 (MQ=255)
                       accagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTa                                                                              >  1:1289936‑M1/77‑100 (MQ=255)
                        gcgcTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTAt                                                                             <  2:3623990/100‑1 (MQ=255)
                          agctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATcc                                                                           >  2:2129475‑M1/74‑100 (MQ=255)
                          agctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATcc                                                                           >  1:669552‑M1/74‑100 (MQ=255)
                            tGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                         <  2:3499043/100‑1 (MQ=255)
                            ctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                         >  2:3006772‑M1/72‑100 (MQ=255)
                             tctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                        >  2:2266326‑M1/71‑100 (MQ=255)
                             tctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                        >  1:2074671‑M1/71‑100 (MQ=255)
                             ggATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTCTGCCCATCCCAGCACGACTGCCGGATAAGGCGTTCACGCCGCATCCGGc                                                                        <  1:3657822/100‑1 (MQ=25)
                             ggATCTGCGCAACAACAAATAATGATGACTGCCGAGAAAGTGCATTTTGTATGCCCATCCCAACACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                        >  2:91191/1‑100 (MQ=255)
                              gATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                       <  1:2165594/100‑1 (MQ=255)
                               aTCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                      >  2:531858/1‑100 (MQ=255)
                                 cTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                    <  2:2842418/100‑1 (MQ=255)
                                 cTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                    >  1:2323068/1‑100 (MQ=255)
                                 cTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                    <  2:428601/100‑1 (MQ=255)
                                  tGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACg                                                                   >  1:3327924/1‑100 (MQ=255)
                                   gcgcAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACgg                                                                  >  2:3077120/1‑100 (MQ=255)
                                    cgcAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATAAGGCGTTCACGCCGCATCCGGcagtcgtg                                                                 <  1:3864306/100‑8 (MQ=21)
                                      caacaacaaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATg                                                               >  2:3254393/1‑100 (MQ=255)
                                      caacaacaaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATg                                                               <  2:3109392/100‑1 (MQ=255)
                                       aacaacaaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAttg                                                              <  2:4080612/100‑3 (MQ=255)
                                        acaacaaATAATGATGACTGCCGAGAACGTGCGTTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGc                                                             <  2:1301938/100‑1 (MQ=255)
                                         caacaaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCg                                                            <  2:2662919/100‑1 (MQ=255)
                                         caacaaATAATGATGACTGCAGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATggtg                                                            >  1:2676943/1‑98 (MQ=255)
                                           acaaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTg                                                          <  1:4301022/100‑1 (MQ=255)
                                           acaaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTg                                                          <  2:1445043/100‑1 (MQ=255)
                                            caaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGTATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTga                                                         <  1:1013213/100‑1 (MQ=255)
                                            caaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCTGCGTGAACGCCTTATCCGGCCTACGGATGGCGTga                                                         <  2:4182443/100‑1 (MQ=255)
                                            caaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTga                                                         <  1:1142052/100‑1 (MQ=255)
                                             aaaTAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTgag                                                        >  2:2387365/1‑100 (MQ=255)
                                             aaaTAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTAAACGCCTTGTCCGGCCTACGGATGGCGTggg                                                        >  1:2970841/1‑98 (MQ=255)
                                              aataatGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTgaga                                                       <  2:275338/100‑1 (MQ=255)
                                                 aatGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAAtt                                                    <  2:1363669/100‑1 (MQ=255)
                                                 aatGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAAtt                                                    >  1:2803682/1‑100 (MQ=255)
                                                 aatGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAAtt                                                    >  2:2494324/1‑100 (MQ=255)
                                                    gatgaCTGCCGAGAACGTGCATGTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATACGGCCTACGGGTGGAGTGAGAATTTGt                                                 >  1:3233627/1‑100 (MQ=21)
                                                     atgaCTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTa                                                <  1:2660235/100‑1 (MQ=255)
                                                      tgaCTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAg                                               <  2:3548513/100‑1 (MQ=255)
                                                      tgaCTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAg                                               >  2:1756062/1‑100 (MQ=255)
                                                         cTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTc                                            <  1:2411903/100‑1 (MQ=255)
                                                         cTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGAGAATTTGTAGGTc                                            >  1:3923546/1‑100 (MQ=255)
                                                          tGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCt                                           <  2:1940047/100‑1 (MQ=255)
                                                           gCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTg                                          <  2:1646834/100‑1 (MQ=255)
                                                           gCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTg                                          >  2:2188524/1‑100 (MQ=255)
                                                           gCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTg                                          >  1:645792/1‑100 (MQ=255)
                                                             cGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGAt                                        <  2:104205/100‑1 (MQ=255)
                                                             cGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGAt                                        <  1:1694329/100‑1 (MQ=255)
                                                             cGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGAt                                        <  1:2241761/100‑1 (MQ=255)
                                                             cGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGAGAATTTGTAGGCCTGAt                                        >  2:2352843/1‑100 (MQ=255)
                                                              gagaACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATa                                       >  2:2458225/1‑100 (MQ=255)
                                                              gagaACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATa                                       <  1:3550377/100‑1 (MQ=255)
                                                                gaACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAg                                     >  1:790186/1‑100 (MQ=255)
                                                                 aaCGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGa                                    <  2:823240/100‑1 (MQ=255)
                                                                   cGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGAcg                                  >  2:3915391/1‑100 (MQ=255)
                                                                   cGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGAcg                                  >  2:1132004/1‑100 (MQ=255)
                                                                    gTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGAcgc                                 <  2:3220442/100‑1 (MQ=255)
                                                                    gTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGAcgc                                 <  1:1690832/100‑1 (MQ=255)
                                                                       cATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGtt                              <  1:3804129/100‑1 (MQ=255)
                                                                       cATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGtt                              <  2:101446/100‑1 (MQ=255)
                                                                         ttttGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAg                            <  1:3688710/100‑1 (MQ=255)
                                                                         ttttGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAg                            <  2:2820258/100‑1 (MQ=255)
                                                                                tGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCa                     <  2:452879/100‑1 (MQ=255)
                                                                                  cccATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATc                   <  1:18564/100‑1 (MQ=255)
                                                                                  cccATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATc                   <  2:4134620/100‑1 (MQ=255)
                                                                                      tCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGGGAATTTGTAGGTCTGATAAGACGCGTTAGAGtatggtaatgc               >  1:2936734/1‑90 (MQ=14)
                                                                                       cccAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCa              <  2:2056761/100‑1 (MQ=255)
                                                                                            cACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgc         >  1:1529991/1‑100 (MQ=40)
                                                                                             aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgcg        <  2:61291/100‑1 (MQ=40)
                                                                                              cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATccggca       >  1:2026025/1‑95 (MQ=255)
                                                                                              cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgcgc       <  2:3758269/100‑1 (MQ=255)
                                                                                               gACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCa      <  1:192211/100‑1 (MQ=40)
                                                                                                 cTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACg    >  2:1591085/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
CAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGAC  >  NC_000913/374831‑375029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.