New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1107709135 (0.850)25 (0.170) 11/164 NT 16.3% coding (1355/1422 nt) clsC stationary phase cardiolipin synthase 3
?NC_000913 = 1107724 132 (0.910)coding (1370/1422 nt) clsC stationary phase cardiolipin synthase 3

Only 100 of 183 total aligned reads displayed.

GGCAGCTCCGTCTGGACAGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCGTTCTCACGCTTAACAACC  >  NC_000913/1107625‑1107823
                                                                                                   |                                                                                                   
ggCAGCTCCGTCTGGACAGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGaa                                                                                                     <  2:1131932/100‑1 (MQ=255)
     cTCCGTCTGGACAGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAgcggg                                                                                                >  2:1891582‑M2/1‑95 (MQ=255)
     cTCCGTCTGGACAGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAgcggg                                                                                                >  2:3756278‑M2/1‑95 (MQ=255)
      tCCGTCTGGACAGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAgcgggt                                                                                               <  1:4084745‑M2/100‑7 (MQ=255)
      tCCGTCTGGACAGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAgcgggt                                                                                               >  1:3218552‑M2/1‑94 (MQ=255)
         gTCTGGACAGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTAt                                                                                            >  2:1800843/1‑100 (MQ=255)
           cTGGACAGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATgg                                                                                          >  2:1956669/1‑100 (MQ=255)
           cTGGACAAGTGGGGACGGATCAACTGGTTTGATCGTCATGCAAAGAAAGTGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATgg                                                                                          <  1:827321/100‑1 (MQ=255)
            tGGACAGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGt                                                                                         <  2:2811452/100‑1 (MQ=255)
                cAGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGa                                                                                     >  1:1474254/1‑100 (MQ=255)
                cAGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGa                                                                                     <  2:275676/100‑1 (MQ=255)
                 aGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGAc                                                                                    <  2:1955338/100‑1 (MQ=255)
                  ggTGGGGACGGATCAACTGGGTTGATCGTCATGCAAGGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACt                                                                                   >  1:4367179/1‑100 (MQ=255)
                  ggTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACt                                                                                   >  1:3915098/1‑100 (MQ=255)
                  ggTGGGGACGGATCAACTGGGTTGATAGTCATGCAAAGAGAGAGATTATTCTCAACAAAGCACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACt                                                                                   >  1:3897366/1‑100 (MQ=255)
                    tGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTgg                                                                                 <  2:4180121/100‑1 (MQ=255)
                    tGGGGACGAATCAATTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTgg                                                                                 <  1:3273902/100‑1 (MQ=255)
                     ggggACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGc                                                                                >  1:3465256/1‑100 (MQ=255)
                      gggACGGATAAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTAAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCg                                                                               <  1:2613640/100‑1 (MQ=255)
                       atgacgATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGt                                                                              >  2:346292/6‑100 (MQ=255)
                          cGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGa                                                                           <  2:573231/100‑1 (MQ=255)
                          cGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGa                                                                           >  2:1468251/1‑100 (MQ=255)
                           ggATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGat                                                                          <  1:864957/100‑1 (MQ=255)
                            gATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGata                                                                         >  1:643280/1‑100 (MQ=255)
                            gATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGata                                                                         >  2:3131904/1‑100 (MQ=255)
                             atcaacccagTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCAGCGatat                                                                        >  1:3631713/10‑100 (MQ=255)
                                aaCTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGc                                                                     >  1:1390671/1‑100 (MQ=255)
                                aaCTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGc                                                                     <  2:217859/100‑1 (MQ=255)
                                aaCTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGc                                                                     <  1:1343925/100‑1 (MQ=255)
                                 aCTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGcc                                                                    <  2:4351926/100‑1 (MQ=255)
                                     ggTTGATCGTCATGCAAAGAGAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTg                                                                <  2:335966/100‑1 (MQ=255)
                                     ggTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTg                                                                <  2:2216025/100‑1 (MQ=255)
                                      gTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTgg                                                               <  2:2872585/100‑1 (MQ=255)
                                      gTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTgg                                                               <  2:3159150/100‑1 (MQ=255)
                                       ttGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGa                                                              <  2:95858/100‑1 (MQ=255)
                                       ttGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGa                                                              <  1:132205/100‑1 (MQ=255)
                                         gATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAAt                                                            <  2:3549352/100‑1 (MQ=255)
                                            cGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATgg                                                          <  1:2491530/99‑1 (MQ=255)
                                             gTCATGCAAAGACAGAGATTATTCTCAAAACAGAACCCGCCACCCGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGt                                                         <  1:3146305/99‑1 (MQ=255)
                                               cATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTAt                                                      <  1:3595035/100‑1 (MQ=255)
                                                ntGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTAtt                                                     >  2:622490/2‑100 (MQ=255)
                                                aTGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTAtt                                                     <  1:952448/100‑1 (MQ=255)
                                                 tGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTg                                                    >  2:713669/1‑100 (MQ=255)
                                                  gCAAAGAAAGAGATTATTCTGAAAAAAGAATCCGCCAACAGATTCTGGAAGAGGGTTATGGTCAGACTGGCGAAGATATTGAAAGTGGAATGGGTATTg                                                    >  1:1623054/1‑99 (MQ=255)
                                                  gCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGt                                                   >  2:825566/1‑100 (MQ=255)
                                                     aagaaagaGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTaaa                                                >  2:300506/1‑100 (MQ=255)
                                                     aagaaagaGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTaaa                                                <  2:2653223/100‑1 (MQ=255)
                                                       gaaagaGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAAtg                                              <  2:1700998/100‑1 (MQ=255)
                                                         aagaGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAAtgtg                                            >  1:3520707/1‑100 (MQ=255)
                                                           gagaTTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGc                                          <  2:4205289/100‑1 (MQ=255)
                                                           gagaTTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGc                                          <  1:4125904/100‑1 (MQ=255)
                                                             gaTTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCtt                                        >  2:2701395/1‑100 (MQ=255)
                                                             gaTTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGATATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCtt                                        >  2:2741279/1‑100 (MQ=255)
                                                             gaTTATTCTAAAAAAAGAACACGCCACCAGTTTCGGGAAGCGGGGTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCtt                                        <  1:1182394/100‑1 (MQ=255)
                                                              attattCTCAAAAAAGAACCCGCCACCAGGTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTa                                       <  1:122855/100‑1 (MQ=255)
                                                                 tctctcAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACg                                    <  1:306944/98‑1 (MQ=255)
                                                                  ttCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACgg                                   >  1:767289/1‑100 (MQ=255)
                                                                   cttcAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACggg                                  <  2:1119004/98‑1 (MQ=255)
                                                                    ctcAAAAAAGAACCCGCCACCAGTTTCTGGAAgcgggttcttttttgagaataatctctttctttgcatgacgatcaacccagttgatccgtccccacct                                 <  1:230621‑M2/100‑69 (MQ=255)
                                                                     tcAAAAAAGAACCCGCCACCAGTTTCTGGAAgcgggttcttttttgagaataatctctttctttgcatgacgatcaacccagttgatccgtccccacctg                                <  2:1849501‑M2/100‑70 (MQ=255)
                                                                     tcAAAAAAGAACCCGCCACCAGTTTCTGGAAgcgggttcttttttgagaataatctctttctttgcatgacgatcaacccagttgatccgtccccacct                                 <  1:1063793‑M2/99‑69 (MQ=255)
                                                                     tcAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCt                                >  2:1420669/1‑100 (MQ=255)
                                                                      cAAAAAAGAACCCGCCACCAGTTTCTGGAAgcgggttcttttttgagaataatctctttctttgcatgacgataaaccaagttgatccgtccctaccttt                               <  1:1663989‑M2/100‑71 (MQ=255)
                                                                       aaaaaaGAACCCGCCACCAGTTTCTGGAAgcgggttcttttttgagaataatctctttctttgcatgacgatcaacccagttgatccgtccccacctgtc                              <  2:901450‑M2/100‑72 (MQ=255)
                                                                       aaaaaaGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTg                               >  1:1779566/1‑99 (MQ=255)
                                                                        aaaaaGAACCCGCCACCAGTTTCTGGAAgcgggttcttttttgagaataatctctttctttgcatgacgatcaacccagttgatccgtccccacctgtcc                             <  2:2163848‑M2/100‑73 (MQ=255)
                                                                        aaaaaGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGACAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGt                             >  1:131103/1‑100 (MQ=255)
                                                                         aaaaGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTg                            <  2:3915123/100‑1 (MQ=255)
                                                                          aaaGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGc                           <  1:4242420/100‑1 (MQ=255)
                                                                          aaaGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGc                           >  2:4322180/1‑100 (MQ=255)
                                                                          aaaGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGc                           >  1:1990978/1‑100 (MQ=255)
                                                                           ccgatctcGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCt                          <  2:372407/93‑1 (MQ=255)
                                                                           aaGAACCCGCCACCAGTTTCTGGAAgcgggttcttttttgagaataatctctttctttgcatgacgatcaacccagttgatccgtccccacctgtccaga                          <  1:2241733‑M2/100‑76 (MQ=255)
                                                                             gAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCttt                        >  2:2460072/1‑100 (MQ=255)
                                                                              aaCCCGCCACCAGTTTGTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTa                       <  1:3982809/100‑1 (MQ=255)
                                                                              aaCCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTa                       >  2:369543/1‑100 (MQ=255)
                                                                               aCCCGCCACCAGTTTCTGGAAgcgggttcttttttgagaataatctctttctttgcatgacgatcaacccagttgatccgtccccacctgtccaggcg                        <  1:1050407‑M2/98‑78 (MQ=255)
                                                                               aCCCGCCACCAGTTTCTGGAAgcgggttcttttttgagaataatctctttctttgcatgacgatcaacccagttgatccgtccccacctgtccagacgga                      <  2:2026936‑M2/100‑80 (MQ=255)
                                                                               aCCCGCCACCAGTTTCTGGAAgcgggttcttttttgagaataatctctttctttgcatgacgatcaacccagttgatccgtccccacctgtccagacgga                      <  2:664146‑M2/100‑80 (MQ=255)
                                                                               aCCCGCCACCAGTTTCTGGAAgcgggttcttttttgagaataatctctttctttgcatgacgatcaacccagttgatccgtccccacctgtccagacgga                      <  2:3422457‑M2/100‑80 (MQ=255)
                                                                               aCCCGCCACCAGTTTCTGGAAgcgggttcttttttgagaataatctctttctttgcatgacgatcaacccagttgatccgtccccacctgtccagacgga                      <  2:1200993‑M2/100‑80 (MQ=255)
                                                                               aCCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTAt                      >  1:2178383/1‑100 (MQ=255)
                                                                                cccGCCACCAGTTTCTGGAAgcgggttcttttttgagaataatctctttctttgcatgacgatcaacccagttgatccgtccccacctgtccagacggag                     <  2:1603633‑M2/100‑81 (MQ=255)
                                                                                cccGCCACCAGTGTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGAGATTGCCCGTGGTATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATc                     >  1:2097300/1‑100 (MQ=255)
                                                                                 ccGCCACCAGTTTCTGGAAgcgggttcttttttgagaataatctctttctttgcatgacgatcaacccagttgatccgtccccacctgtccagacggagc                    <  2:158131‑M2/100‑82 (MQ=255)
                                                                                 ccGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCg                    <  2:2440191/100‑1 (MQ=255)
                                                                                 ccGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCg                    <  1:4185499/100‑1 (MQ=255)
                                                                                  cGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCtagatcgg                   >  1:372406/1‑93 (MQ=255)
                                                                                  cGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGGCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCg                    <  1:3557843/99‑1 (MQ=255)
                                                                                    ccaccaGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCGTtc                 <  2:713882/100‑1 (MQ=255)
                                                                                     caccaGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCGTtct                >  1:2742082/1‑100 (MQ=255)
                                                                                         aGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCGTTCTCACg            >  2:3997015/1‑100 (MQ=255)
                                                                                          gTTTCTGGAAGCGTGTTATTGTCAGGCTGGCTTCGATATTGTCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGGTGGTGCTTTATCGttn                 <  1:2937245/94‑2 (MQ=255)
                                                                                            ttCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCGTTCTCACGCtt         >  2:3014928/1‑100 (MQ=255)
                                                                                              cTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCGTTCTCACGCTTaa       <  2:2903271/100‑1 (MQ=255)
                                                                                               tGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCGTTCTCACGCTTaac      <  2:767291/100‑1 (MQ=255)
                                                                                               tGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCGTTCTCACGCTTaac      >  1:230082/1‑100 (MQ=255)
                                                                                                ggAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCGTTCTCACGCTTaaca     <  2:3762765/100‑1 (MQ=255)
                                                                                                  aaGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCGTTCTCACGCTTaacaac   >  1:1539285/1‑100 (MQ=255)
                                                                                                   aGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCGTTCTCACGCTTAACAAcc  >  1:525128/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GGCAGCTCCGTCTGGACAGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAAATGTGGCTTAACGGGCTGGTGCTTTATCGTTCTCACGCTTAACAACC  >  NC_000913/1107625‑1107823

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.