New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2204447 =126 (0.800)22 (0.160) 12/156 NT 18.5% intergenic (+158/‑149) yehK/yehL uncharacterized protein/putative hexameric AAA+ MoxR family ATPase
?NC_000913 2204492 = 83 (0.600)intergenic (+203/‑104) yehK/yehL uncharacterized protein/putative hexameric AAA+ MoxR family ATPase

Only 100 of 164 total aligned reads displayed.

AATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGA  >  NC_000913/2204393‑2204591
                                                                                                   |                                                                                                   
  ttcgttcgTTGGAACAAGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACtg                                                                                                     <  1:483467/98‑1 (MQ=255)
    cgttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGAt                                                                                                 >  1:2245122/1‑100 (MQ=255)
    cgttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGAt                                                                                                 >  2:3197961/1‑100 (MQ=255)
         tttGGAACACGATGTTTCACAGGCTGTGGTGTTAGGTCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCt                                                                                            <  2:1903157/99‑1 (MQ=255)
         gttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCt                                                                                            >  2:431576/1‑100 (MQ=255)
         ggtGGAACACGATGTTGCACAGTCTGTGGTGTTAGGCCTGAAAATAGTAGATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGc                                                                                             >  1:3073825/3‑99 (MQ=255)
             gAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACTTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTcc                                                                                        >  1:2816251/1‑100 (MQ=255)
             gAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTcc                                                                                        <  2:4050824/100‑1 (MQ=255)
              aaCACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCa                                                                                       >  1:3100294/1‑100 (MQ=255)
              aaCACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCa                                                                                       <  1:4229329/100‑1 (MQ=255)
               acacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATATTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCa                                                                                       <  1:2018568/99‑1 (MQ=255)
               acacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAg                                                                                      >  1:1479774/1‑100 (MQ=255)
               acacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAg                                                                                      <  2:4209319/100‑1 (MQ=255)
                 acGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGat                                                                                    <  2:1235185/100‑1 (MQ=255)
                     tGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATAttt                                                                                >  1:2996347/1‑100 (MQ=255)
                       ttGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATAttttt                                                                              >  1:1296175/1‑100 (MQ=255)
                       ttGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATAttttt                                                                              <  1:1076968/100‑1 (MQ=255)
                        tGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATAttttt                                                                              >  1:449718/1‑99 (MQ=255)
                        tGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTc                                                                             <  2:793659/100‑1 (MQ=255)
                        tGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTc                                                                             <  2:4163826/100‑1 (MQ=255)
                         gCACAGGCTTTGGTGTTAGGCCTTAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCATATATTTTTCg                                                                            <  1:466437/100‑1 (MQ=255)
                          cacaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGc                                                                           <  2:3923132/100‑1 (MQ=255)
                          cacaGGCGGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCGCACCAGCAGGTTTATTTATTTACTGTGATCTGCGTTCCAGATAtttt                                                                               >  1:3955388/1‑96 (MQ=255)
                            caGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGGTCTGCTTTCCAGATATTTTTCGCTc                                                                         >  2:2051837/1‑100 (MQ=255)
                                cTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaac                                                                     <  2:114458/100‑1 (MQ=255)
                                cTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaac                                                                     <  2:3812107/100‑1 (MQ=255)
                                cTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaac                                                                     >  2:117303/1‑100 (MQ=255)
                                 tgtgGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCTCCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCaaa                                                                      <  1:543386/98‑1 (MQ=255)
                                   tggtgTTTGGCCTTAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATGTACTGTAATTTGCTTTCTAGATATTTTTCGCACAaacaac                                                                  <  1:908229/100‑1 (MQ=255)
                                   tggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCTAGATATTTTTTGCTCAaac                                                                     <  1:1459571/97‑1 (MQ=255)
                                    ggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACt                                                                 <  2:2484195/100‑1 (MQ=255)
                                     gtgtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTa                                                                >  2:4334358/1‑100 (MQ=255)
                                       gtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAAt                                                              <  1:3044674/100‑1 (MQ=255)
                                         tAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgc                                                            >  1:1030693/1‑100 (MQ=255)
                                           ggCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcgc                                                          >  2:3002798/1‑100 (MQ=255)
                                            gCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGcc                                                         >  1:1235818/1‑100 (MQ=255)
                                             ccTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCa                                                        >  1:851543/1‑100 (MQ=255)
                                              cTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCaa                                                       >  2:4081099/1‑100 (MQ=255)
                                                gatcacagtaaataaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCAAGAAATTTTTCGCTCAAACAACTAATGCTCCaaa                                                      >  1:339822‑M2/52‑99 (MQ=255)
                                                 atcacagtaaataaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACa                                                    >  2:932548‑M2/51‑100 (MQ=255)
                                                  aaaTAGTAAATAAAAGAACCTGCCTCTCCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTTAAATAACTAATGCGCCAAACa                                                    <  1:1038897/99‑1 (MQ=255)
                                                   cacagtaaataaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAtt                                                  >  2:2056910‑M2/49‑100 (MQ=255)
                                                    acagtaaataaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAttt                                                 >  1:2074216‑M2/48‑100 (MQ=255)
                                                    aTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAttt                                                 <  1:1560099/100‑1 (MQ=255)
                                                     tAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTa                                                >  1:2925858/1‑100 (MQ=255)
                                                     cagtaaataaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTa                                                >  1:1268702‑M2/47‑100 (MQ=255)
                                                     caGTAAATAAAAAAACCTGCTGGAGAGGCAGGTTCTTTTAATTACTGTGATCTGCTTTCCAGATATTTTTAGATCAAAAAACTAATACAACAAAAATTTa                                                >  1:1727338/2‑100 (MQ=9)
                                                     aagtaaataaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTa                                                >  1:632751‑M2/47‑100 (MQ=255)
                                                      agtaaatcaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAt                                               >  2:2301542‑M2/46‑100 (MQ=255)
                                                      agtaaataaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTTAAACAACTAATGCGCCAAACATTTa                                                >  1:162841‑M2/46‑99 (MQ=255)
                                                       gtaaataaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAtt                                              >  1:341744‑M2/45‑100 (MQ=255)
                                                       gtaaataaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTGCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAtt                                              >  1:1608880‑M2/45‑100 (MQ=255)
                                                       agtaaataaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAtt                                              >  1:2789235‑M2/45‑100 (MQ=255)
                                                       GTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAtt                                              >  2:3601703‑M1/1‑100 (MQ=255)
                                                         aaataaaaaaacctgctggtgaggcaggtttttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgc                                            >  1:3989374‑M2/43‑100 (MQ=255)
                                                         AAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgc                                            <  2:2803422‑M1/100‑1 (MQ=255)
                                                         AAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgc                                            <  2:1916318‑M1/100‑1 (MQ=255)
                                                         AAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCCCCCACCATTtatttc                                            <  1:340562‑M1/100‑3 (MQ=255)
                                                          AATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcg                                           <  2:2645587‑M1/100‑1 (MQ=255)
                                                          AATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcg                                           <  2:925105‑M1/100‑1 (MQ=255)
                                                           ataaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcgc                                          >  2:2298995‑M2/41‑100 (MQ=255)
                                                            taaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGcgcg                                         >  2:1023482‑M2/40‑100 (MQ=255)
                                                            TAAAAGAACCTGCCTCGCCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGcgcg                                         >  1:2570475‑M1/1‑100 (MQ=255)
                                                            TAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGcgcg                                         >  1:2818867‑M1/1‑100 (MQ=255)
                                                            TAAAAGAACCTGCCTCACCAGCAGGTTTTTATAATTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAGTTATTGcgcg                                         <  1:2887353‑M1/100‑1 (MQ=255)
                                                             aaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATCTTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGt                                        >  1:203429‑M2/39‑100 (MQ=255)
                                                              AAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTa                                       <  2:3396101‑M1/100‑1 (MQ=255)
                                                                   acctgctggtgaggcaggtttttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAata                                  >  2:2058580‑M2/33‑100 (MQ=255)
                                                                   aCCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAata                                  <  2:2568324/100‑1 (MQ=255)
                                                                   aCCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTCCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTaaaaga                                  >  1:1694368/1‑98 (MQ=255)
                                                                     cTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATc                                <  2:2359185/100‑1 (MQ=255)
                                                                      tGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCg                               <  2:3592128/100‑1 (MQ=255)
                                                                         cTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGttt                            >  2:223943/1‑100 (MQ=255)
                                                                                 cagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAtt                    <  1:233984/100‑1 (MQ=255)
                                                                                 cagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAtt                    <  1:4046521/100‑1 (MQ=255)
                                                                                 cagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAtt                    <  1:2533350/100‑1 (MQ=255)
                                                                                 cagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAtt                    <  2:1225279/100‑1 (MQ=255)
                                                                                 cagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAtt                    <  1:3177718/100‑1 (MQ=255)
                                                                                  agGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTa                   <  2:1346431/100‑1 (MQ=255)
                                                                                  agGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTa                   <  1:3521552/100‑1 (MQ=255)
                                                                                   ggTTTTTTTATTTACTGTTATCTGCTTTCCAGATATTTTTTGCTCAAACAACTAATGCGCCAAACATTTATTGCACGTAAAATATCGTTTATTTCATTaa                  >  1:630492/1‑100 (MQ=255)
                                                                                   ggTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTaa                  <  2:4014827/100‑1 (MQ=255)
                                                                                    gTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAAt                 >  2:3908672/1‑100 (MQ=255)
                                                                                     tttttttATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATa                >  2:3894512/1‑100 (MQ=255)
                                                                                      ttttttATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAAGAc               <  1:3556044/100‑1 (MQ=255)
                                                                                      ttttgtACTTACTGTGAGCTAGTTTCCTCAGATTTTTCGCTCAAGCAACTTGTGCGCCTATCATTTATTGCGCGAAAAAAATCGTTTATTTCATGAAtgc               <  1:262923/100‑3 (MQ=255)
                                                                                       tttttATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAATAATTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATa                >  1:1109337/1‑98 (MQ=255)
                                                                                           tatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTc          >  1:4235498‑M2/9‑100 (MQ=255)
                                                                                           tatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTc          >  1:708814‑M2/9‑100 (MQ=255)
                                                                                           tatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTc          >  2:644612‑M2/9‑100 (MQ=255)
                                                                                             tttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCa         >  2:3077085‑M2/7‑99 (MQ=255)
                                                                                             tttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAg        <  2:1695724‑M2/94‑1 (MQ=255)
                                                                                              ttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCaga       >  1:1695718‑M2/6‑99 (MQ=255)
                                                                                              ttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAgg       <  1:1385166‑M2/95‑1 (MQ=255)
                                                                                               tactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAggg      <  1:3804223‑M2/96‑1 (MQ=255)
                                                                                               tactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAgg       <  1:326575‑M2/95‑1 (MQ=255)
                                                                                                actGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGa     <  2:1606699‑M2/97‑1 (MQ=255)
                                                                                                 ctGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGAt    <  2:3455887‑M2/98‑1 (MQ=255)
                                                                                                 ctGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGAt    <  2:2816267‑M2/98‑1 (MQ=255)
                                                                                                  tGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATg   <  2:3738230‑M2/99‑1 (MQ=255)
                                                                                                   |                                                                                                   
AATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGA  >  NC_000913/2204393‑2204591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.