New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3619841 =	NA (NA)	10 (0.070)	6/166	NT	100%	coding (650/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	3619863 =	0 (0.000)					coding (672/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGAC  >  NC_000913/3619764‑3619940                                                                                                    |                                                                              tcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccc                                                                               <  2:3016988‑M2/1‑1 (MQ=255) tcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccc                                                                               >  2:1283017‑M2/100‑100 (MQ=255) tcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccc                                                                               <  1:289230‑M2/1‑1 (MQ=255) tcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccc                                                                               <  2:401712‑M2/1‑1 (MQ=255) tcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccc                                                                               <  1:306636‑M2/1‑1 (MQ=255)  cagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccc                                                                               <  1:2368956‑M2/1‑1 (MQ=255)  cagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCg                                                                              >  2:3185430‑M2/99‑100 (MQ=255)  cagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCg                                                                              >  2:687803‑M2/99‑100 (MQ=255)  cagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCg                                                                              <  2:4086587‑M2/2‑1 (MQ=255)  cagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCg                                                                              >  1:3784458‑M2/99‑100 (MQ=255)   agtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCg                                                                              <  1:270785‑M2/2‑1 (MQ=255)   agtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGa                                                                             <  2:795510‑M2/3‑1 (MQ=255)   agtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGa                                                                             <  2:2549135‑M2/3‑1 (MQ=255)   agtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGa                                                                             <  2:3156805‑M2/3‑1 (MQ=255)    gtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGaa                                                                            >  2:3061243‑M2/97‑100 (MQ=255)    gtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGaa                                                                            >  2:3380090‑M2/97‑100 (MQ=255)    gtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGaa                                                                            >  2:631251‑M2/97‑100 (MQ=255)    gtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGaa                                                                            >  1:1323810‑M2/97‑100 (MQ=255)    gtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcagtggaacgtctgtgtgcgccCGaa                                                                            <  2:2808240‑M2/4‑1 (MQ=255)    gtaccagccggaagtgacgccaggcaccatccgtcacgccggcgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGa                                                                             >  1:2117632‑M2/97‑99 (MQ=255)    gtaccagccggaagtgacgccaggcaccatccatcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccc                                                                               >  1:859762‑M2/97‑97 (MQ=255)     taccagccggcagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggccgcttcgcggtggaacgtctgtgtgcgccCGAAg                                                                           <  1:2892101‑M2/5‑1 (MQ=255)     taccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGAAg                                                                           <  2:4229225‑M2/5‑1 (MQ=255)     taccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGAAg                                                                           <  2:1913976‑M2/5‑1 (MQ=255)     taccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGAAg                                                                           <  2:1473085‑M2/5‑1 (MQ=255)     taccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGAAg                                                                           >  1:2469201‑M2/96‑100 (MQ=255)      accagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGAagn                                                                          <  2:3845139‑M2/6‑2 (MQ=255)      accagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGAAgc                                                                          >  2:1829374‑M2/95‑100 (MQ=255)      accagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGAAgc                                                                          <  2:672326‑M2/6‑1 (MQ=255)      accagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGAAgc                                                                          <  2:913174‑M2/6‑1 (MQ=255)      accagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGAAgc                                                                          >  2:1951803‑M2/95‑100 (MQ=255)      accagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGAAgc                                                                          <  2:1368163‑M2/6‑1 (MQ=255)      accagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGAAgc                                                                          >  1:4321727‑M2/95‑100 (MQ=255)      accagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGAAgc                                                                          >  1:1647029‑M2/95‑100 (MQ=255)      accagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgccCGAAgc                                                                          >  1:1297820‑M2/95‑100 (MQ=255)                                                             attcaccggcggcttcgcggtggaacgtctgtgtgcgccCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCAc                   >  1:1260535‑M2/40‑100 (MQ=255)                                                                caccggcggcttcgcggtggaacgtctgtgtgcgccCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTc                >  2:4051767‑M2/37‑100 (MQ=255)                                                                 accggcggcttcgcggtggaacgtctgtgtgcgccCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTcc               >  1:575279‑M2/36‑100 (MQ=255)                                                                  ccggcggcttcgcggtggaacgtctgtgtgcgccCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCg              >  2:3287304‑M2/35‑100 (MQ=255)                                                                  ccggcggcttcgcggtggaacgtctgtgtgcgccCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCg              >  1:42704‑M2/35‑100 (MQ=255)                                                                      cggcttcgcggtggaacgtctgtgtgcgccCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTg          >  2:2769530‑M2/31‑100 (MQ=255)                                                                       ggcttcgcggtggaacgtctgtgtgcgccCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTgg         >  2:3132592‑M2/30‑100 (MQ=255)                                                                       ggcttcgcggtggaacgtctgtgtgcgccCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTgg         >  1:2947616‑M2/30‑100 (MQ=255)                                                                        gcttcgcggtggaacgtctgtgtgcgccCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGt        >  1:3528511‑M2/29‑100 (MQ=255)                                                                              cggtggaacgtctgtgtgcgccCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGAc  >  1:253229‑M2/23‑100 (MQ=255)                                                                                                    |                                                                              GGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGAC  >  NC_000913/3619764‑3619940

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.