New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3621314	NA (NA)	6 (0.040)	5/168	NT	100%	coding (2123/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	= 3621344	0 (0.000)					coding (2153/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

TTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGAC  >  NC_000913/3621245‑3621443                                                                                                    |                                                                                                    ttATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTG                                                                                                     >  2:3511795‑M2/1‑100 (MQ=255) ttATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTG                                                                                                     <  2:3081992‑M2/100‑1 (MQ=255) ttATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTG                                                                                                     >  2:2953227‑M2/1‑100 (MQ=255) ttATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTG                                                                                                     >  2:2585210‑M2/1‑100 (MQ=255) ttATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTG                                                                                                     >  2:2435500‑M2/1‑100 (MQ=255) ttATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCGCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTG                                                                                                     >  1:296738‑M2/1‑100 (MQ=255)  tATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAACGGTGAAACCGCAGAGCGGTG                                                                                                     >  2:4139527‑M2/1‑99 (MQ=255)                     ggTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGcgtgaggcggtctgcttcgt                                                                                 >  1:1297288‑M2/1‑80 (MQ=255)                                                           ccTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcct                                           <  1:1177588‑M2/100‑59 (MQ=255)                                                                 gcaccgcaccGTGAAGGGTGAAACCGCAGAGCGGTGcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgc                                     <  2:1796500‑M2/100‑65 (MQ=255)                                                                    ccgcaccgTGAAGGGTGAAACCGCAGAGCGGTGctgtgcgtgaggcggtctgcttcgtcatagtgagagtgggtgacaagaccgtcgtactcgctgcg                                    <  1:117169‑M2/98‑66 (MQ=255)                                                                      gcaccgTGAAGGGTGAAACCGCAGAGCGGTGcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggata                                <  1:481074‑M2/100‑70 (MQ=255)                                                                      gcaccgTGAAGGGTGAAACCGCAGAGCGGTGcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggata                                <  2:2646685‑M2/100‑70 (MQ=255)                                                                                                cggtgcggtgcgtgatgcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggataagtttgccggtcaggtcgtggtgat       >  2:647655‑M2/1‑5 (MQ=255)                                                                                                cggtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggataagtttgccggtcaggtcgtggtgata      >  1:2592111‑M2/1‑5 (MQ=255)                                                                                                cggtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggataagtttgccggtcaggtcgtggtgata      >  2:39116‑M2/1‑5 (MQ=255)                                                                                                cggtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggataagtttgccggtcaggtcgtggtgata      >  2:4286315‑M2/1‑5 (MQ=255)                                                                                                cggtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggataagtttgccggtcaggtcgtggtgata      <  1:4369442‑M2/100‑96 (MQ=255)                                                                                                cggtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggataagtttgccgggcaggtcgtggtgata      <  2:281652‑M2/100‑96 (MQ=255)                                                                                                 ggtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggataagtttgccggtcaggtcgtggtgataa     <  1:2960696‑M2/100‑97 (MQ=255)                                                                                                 ggtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcagcctcgctgcggataagtttgccggtcaggtcgtggtgata      >  1:2830313‑M2/1‑4 (MQ=255)                                                                                                  gtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggataagtttgccggtcaggtcgtggtgataac    >  2:3473959‑M2/1‑3 (MQ=255)                                                                                                  gtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggataagtttgccggtcaggtcgtggtgataac    >  2:4303357‑M2/1‑3 (MQ=255)                                                                                                  gtgcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggataagtttgccggtcaggtcgtggtgataa     <  2:487060‑M2/99‑97 (MQ=255)                                                                                                    gcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggataagtttgccggtcaggtcgtggtgataacgc  <  1:3046790‑M2/100‑100 (MQ=255)                                                                                                    gcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggataagtttgccggacaggtcgtggtgataacgc  <  1:4094828‑M2/100‑100 (MQ=255)                                                                                                    |                                                                                                    TTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGAC  >  NC_000913/3621245‑3621443

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.