New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3908387 =NA (NA)16 (0.110) 7/164 NT NA noncoding (1/64 nt) REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3908412 = NA (NA)noncoding (26/64 nt) REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 260 total aligned reads displayed.

AGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG  >  NC_000913/3908315‑3908511
                                                                                                 |                                                                                                   
aGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTa                                                                                                   >  2:3905805/1‑100 (MQ=255)
 gcctttttgactctgtacacggttaacactttgccggatgcggcgtgaacgcctgatccggcctacggtaaGCCTGATGCACTTCGCTAATCAGGCTTAc                                                                                                  >  1:106038‑M1/72‑100 (MQ=255)
 gcctttttgactctgtacacggttaacactttgccggatgcggcgtgaacgcctgatccggcctacggtaaGCCTGATGCACTTCGCTAATCAGGCTTAc                                                                                                  >  2:2400472‑M1/72‑100 (MQ=255)
 gTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTAc                                                                                                  >  1:4329767/1‑100 (MQ=255)
  ttCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTAATGCACTTCGCTAATCAGGCTTAcc                                                                                                 >  1:224863/1‑100 (MQ=255)
  cctttttgactctgtacacggttaacactttgccggatgcggcgtgaacacttgatccggcctacggtaaGCCTGATGCACTTCGCTAATCAGGCTTAcc                                                                                                 >  1:2148318‑M1/71‑100 (MQ=255)
   tCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCg                                                                                                >  1:1764081/1‑100 (MQ=255)
   tCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCg                                                                                                >  2:330406/1‑100 (MQ=255)
    cAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCGTTGCAATCTTTTCCTCATCGTGCCTGATTCACTTCGCTCATCAGGCTTACCGt                                                                                               >  1:1897053/1‑100 (MQ=255)
    cAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGt                                                                                               >  2:503923/1‑100 (MQ=255)
    cAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGt                                                                                               >  1:2292001/1‑100 (MQ=255)
    cAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGt                                                                                               >  2:3759124/1‑100 (MQ=255)
     ttttgagtctgtacacggttaacgctttgccggatgcggcggggacgcctgatccggcctacggtaaGCCTGATGCACTGCGCTAATCAGGCTTAc                                                                                                  >  1:3280034‑M1/68‑96 (MQ=255)
     aaaTTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTa                                                                                              >  2:1529650/1‑100 (MQ=255)
       aTTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAgg                                                                                            <  1:1643008/100‑1 (MQ=255)
       aTTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAgg                                                                                            <  1:3185373/100‑1 (MQ=255)
          aCGAACCTGAATTTTACTCGGGGCAGTTTCAACAAGACTCATTGCAATCTTTTCATCATCGTGACTGATGCACTTCGCTAATCCGGCTTACGGCAGGCCg                                                                                         >  1:3281982/1‑100 (MQ=255)
           cGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCgg                                                                                        <  2:3606589/100‑1 (MQ=255)
               ccTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCa                                                                                    >  2:2761990/1‑100 (MQ=255)
                cTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAg                                                                                   >  2:702550/1‑100 (MQ=255)
                    aTTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGt                                                                               <  2:1421939/100‑1 (MQ=255)
                     ttttACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGtt                                                                              >  2:1477684/1‑100 (MQ=255)
                      tttACTCGGCGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTc                                                                             <  1:4031977/100‑1 (MQ=255)
                        tACTCGGGGCAGTTTCAACCATACTCAATGCAATCTTTTCCGCATCGTGCCGGATGCACTTCGCTAATCTGGCGTACCGTAGGCCGGATCAgn                                                                                  <  1:3706557/93‑2 (MQ=255)
                         aCTCGGGGCAGTTTCAACCATACTCATTGCGATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcg                                                                          <  2:3213148/100‑1 (MQ=255)
                          cTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgc                                                                         >  2:939748/1‑100 (MQ=255)
                          cTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgc                                                                         >  2:699497/1‑100 (MQ=255)
                          cTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgc                                                                         >  1:2481025/1‑100 (MQ=255)
                          cTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgc                                                                         >  1:2427481/1‑100 (MQ=255)
                          cTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgc                                                                         >  2:4184200/1‑100 (MQ=255)
                           tCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgcc                                                                        <  1:888631/100‑1 (MQ=255)
                            cGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTTGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgccg                                                                       >  1:4260412/1‑100 (MQ=255)
                            cGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgccg                                                                       >  2:3097554/1‑100 (MQ=255)
                            cGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgccg                                                                       <  1:3958555/100‑1 (MQ=255)
                            cGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgcc                                                                        >  1:3364617/1‑99 (MQ=255)
                             ggggCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgccgc                                                                      <  1:2903806/100‑1 (MQ=255)
                              gggCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCa                                                                     <  2:372364/100‑1 (MQ=255)
                                  aGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCg                                                                 >  1:3446139/1‑100 (MQ=255)
                                   gTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCgg                                                                <  2:2194218/100‑1 (MQ=255)
                                    tttCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGc                                                               <  2:1630600/100‑1 (MQ=255)
                                    tttCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAAGCCGGATCACGCGTTAACGCCGCATCCGGc                                                               >  1:4161732/1‑100 (MQ=255)
                                      tCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCCGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTAACGCCGCATCCgg                                                                >  1:2542774/1‑97 (MQ=255)
                                        aaCCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAg                                                           >  2:2803240/1‑100 (MQ=255)
                                        aaCCATACTCATTGCAATCTTTTCCTCATCGTGCCTGAGGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAg                                                           <  1:2939149/100‑1 (MQ=255)
                                         nccATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAgt                                                          >  1:1381797/2‑100 (MQ=255)
                                         aCCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAgt                                                          >  2:3342066/1‑100 (MQ=255)
                                         aCCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAgt                                                          <  2:1569695/100‑1 (MQ=255)
                                          ccATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGTATGCGGCGTGAACGCCTGTTCCGGcctacgg                                                         <  1:2168970/100‑7 (MQ=25)
                                          ccATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAgtg                                                         <  2:4317849/100‑1 (MQ=255)
                                            aTACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGtt                                                       <  2:2604409/100‑1 (MQ=255)
                                              aCTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTATGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTaa                                                     >  2:3081995/1‑100 (MQ=255)
                                               cTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAAc                                                    >  2:1751774/1‑100 (MQ=255)
                                               cTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAAc                                                    >  2:1833213/1‑100 (MQ=255)
                                               cTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAAc                                                    >  1:4104358/1‑100 (MQ=255)
                                                tCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAAcc                                                   <  1:2655121/100‑1 (MQ=255)
                                                   ttGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCgtg                                                <  1:1184093/100‑1 (MQ=255)
                                                    tgaaaTCTTTTCCTCATCGTGCCTGATGCACTTCCCGAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAAcc                                                   <  1:3598734/93‑1 (MQ=255)
                                                     gCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTa                                              >  2:2481866/1‑100 (MQ=255)
                                                      cAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTAc                                             <  2:3575795/100‑1 (MQ=255)
                                                         tCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACaga                                          >  1:2076876/1‑100 (MQ=255)
                                                          cTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACagag                                         >  2:3404549/1‑100 (MQ=255)
                                                          cTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACagag                                         <  1:1068432/100‑1 (MQ=255)
                                                          cTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACagag                                         <  1:480144/100‑1 (MQ=255)
                                                          cTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACagag                                         <  2:109801/100‑1 (MQ=255)
                                                          attttGCTCATCGTGACTGGTACACTTGGCTCATCGGGCTTACCGAAGACCGGATCAGGCGTTCACGCCGCATCCTGCAAAGTGTTAACCGTGTACagag                                         <  1:422579/99‑1 (MQ=25)
                                                           ttttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGt                                        <  2:4035107/100‑1 (MQ=255)
                                                             ttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCa                                      <  2:2196839/100‑1 (MQ=255)
                                                             ttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCa                                      >  1:3053984/1‑100 (MQ=255)
                                                             ttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCa                                      <  1:1752390/100‑1 (MQ=255)
                                                              tCCTCATCGTGCCTGATCCACTTCGCTAATCAGGCTTACCGTCGCCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACAGTGTACAGAGTCaa                                     >  1:236236/1‑100 (MQ=38)
                                                               ccTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCaaa                                    >  1:3427511/1‑100 (MQ=255)
                                                               ccTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCaaa                                    >  2:364632/1‑100 (MQ=255)
                                                                ctcctcGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGTCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCacaa                                   >  1:3757302/1‑100 (MQ=255)
                                                                 tCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCaaaaa                                  <  1:2527219/100‑1 (MQ=255)
                                                                 tCATCGTGCCTGATGCACTTCGCTAATCAGGCTTAACGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCaaaaa                                  >  1:65616/1‑100 (MQ=255)
                                                                  cATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCTCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAg                                 <  1:2705385/100‑1 (MQ=255)
                                                                  cATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAg                                 >  2:2849009/1‑100 (MQ=255)
                                                                    gtaagcctgattagcgaagtgcatcaggcTTACCGTAGGCACGATCAGGCGTTCGCGCCGCATCCGGCAACGTGTTAACCGTGTACAGAGTCAAAAAGgc                               >  2:1329076‑M2/30‑100 (MQ=255)
                                                                     taagcctgattagcgaagtgcatcaggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGgcg                              >  2:4110054‑M2/29‑100 (MQ=255)
                                                                     cGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGgcg                              >  2:3372660/1‑100 (MQ=255)
                                                                      aagcctgattagcgaagtgcatcaggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGgcgc                             >  1:1204204‑M2/28‑100 (MQ=255)
                                                                       agcctgattagcgaagtgcatcaggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCt                            >  2:1312547‑M2/27‑100 (MQ=255)
                                                                       agcctgattagcgaagtgcatcaggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCt                            >  1:2732691‑M2/27‑100 (MQ=255)
                                                                        GCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtc                           <  2:3032625‑M1/100‑1 (MQ=255)
                                                                        GCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtc                           <  2:3237755‑M1/100‑1 (MQ=255)
                                                                          CTGATGCACTTCGCTAATCAGGCTTACCGTAGGTCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcgg                         <  2:2003947‑M1/100‑1 (MQ=255)
                                                                          CTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGcgcttgg                         >  1:2769104‑M1/1‑97 (MQ=255)
                                                                           TGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtaggt                        <  1:1979162‑M1/100‑1 (MQ=255)
                                                                            gATGCACTTCGCTAATCAGACTTACCGTAAGACGGATCAGGCGTTCACGCCGCATCCTGCAAAGAGATAAGCGTTTACAGAGGCAAAAAGGCGCtcggtc                       >  1:3669510/1‑100 (MQ=25)
                                                                            GATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcggtc                       <  2:230311‑M1/100‑1 (MQ=255)
                                                                              TGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcggtcgg                     >  1:1475671‑M1/1‑100 (MQ=255)
                                                                              TGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcggtcgg                     <  1:388745‑M1/100‑1 (MQ=255)
                                                                              TGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcggtcgg                     >  2:789605‑M1/1‑100 (MQ=255)
                                                                                 aCTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTcc                  <  2:2942529/100‑1 (MQ=255)
                                                                                  cTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTccc                 >  2:2354593/1‑100 (MQ=255)
                                                                                        tAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGcc           <  2:4251421/100‑1 (MQ=255)
                                                                                         aaTCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGccc          >  1:1510902/1‑100 (MQ=255)
                                                                                          atcaggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGcccc         >  2:4370900‑M2/8‑100 (MQ=255)
                                                                                              ggcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTg     >  1:54290‑M2/4‑100 (MQ=255)
                                                                                               gcTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTgg    <  2:3946675‑M2/98‑1 (MQ=255)
                                                                                                 |                                                                                                   
AGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG  >  NC_000913/3908315‑3908511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.