BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4631855	181 (1.150)	8 (0.050)	5/166	NT	4.4%	coding (1123/1938 nt)	slt	lytic murein transglycosylase, soluble
*	?	NC_000913	= 4631875	180 (1.220)	8 (0.050)	5/166	NT	4.4%	coding (1143/1938 nt)	slt	lytic murein transglycosylase, soluble
Rejected: Frequency below cutoff threshold.

Only 100 of 219 total aligned reads displayed.

GCGTTACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCG  >  NC_000913/4631776‑4631973

gCGTTACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATg                                                                                                    <  1:1483462/100‑1 (MQ=255)

  gTTACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCCTGCAACAGCGGGGTTTCTACCCGATCGt                                                                                                  >  1:126265/1‑100 (MQ=255)

    tACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGgttg                                                                                                >  2:1065178‑M2/1‑96 (MQ=255)

     aCTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGgttgc                                                                                               >  2:1199087‑M2/1‑95 (MQ=255)

     aCTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGgttg                                                                                                >  1:3364782‑M2/1‑95 (MQ=255)

        ggCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTCTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTgcagc                                                                                            <  1:2446242/100‑1 (MQ=255)

         gCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTgcagca                                                                                           <  1:3991388/100‑1 (MQ=255)

         gCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTgcagca                                                                                           <  2:3075123/100‑1 (MQ=255)

          cAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGcac                                                                                          >  2:2978068/1‑100 (MQ=255)

          cAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGcac                                                                                          >  1:3124135/1‑100 (MQ=255)

            ggCGGGGTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGGGGTTTGTACCTGATGGTTGCAGCACaa                                                                                        >  1:4391173/1‑100 (MQ=255)

            ggCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACaa                                                                                        >  2:3397020/1‑100 (MQ=255)

                gATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCa                                                                                    >  2:2434124/1‑100 (MQ=255)

                gATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCa                                                                                    >  2:1443861/1‑100 (MQ=255)

                gATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCa                                                                                    >  1:2700264/1‑100 (MQ=255)

                   ttATTGTTGGCCCGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCAGCATCTCATGCAACAGCGTTGTTTCGACCCGATGGTTGCAGCACAACGCATc                                                                                  <  1:499321/99‑1 (MQ=255)

                    tATTGCTGGAACGCGGACGTGAAGCTGAAGCAAACGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCgg                                                                                <  1:2318861/100‑1 (MQ=255)

                      ttGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCg                                                                              <  1:1264634/100‑1 (MQ=255)

                       tGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGa                                                                             >  1:1994441/1‑100 (MQ=255)

                       tGCTGGAACGCGGACGTAAAGAAGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGa                                                                             <  1:25877/100‑1 (MQ=255)

                        gCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                            >  1:2507888/1‑100 (MQ=255)

                         cTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAag                                                                           <  2:1564287/100‑1 (MQ=255)

                          tGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAaga                                                                          >  1:2217076/1‑100 (MQ=255)

                           ggAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAagag                                                                         >  2:2466680/1‑100 (MQ=255)

                             aaCGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTa                                                                       >  2:128332/1‑100 (MQ=255)

                               cgcgGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATg                                                                     <  1:2870226/100‑1 (MQ=255)

                               cgcgGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATg                                                                     <  1:1443856/100‑1 (MQ=255)

                                 cgGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAg                                                                   >  2:1840241/1‑100 (MQ=255)

                                  ggAGGTGAAGCTGAAGCAAAACAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAg                                                                   <  1:3459757/99‑1 (MQ=255)

                                   gACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGc                                                                  >  1:1045497/1‑99 (MQ=255)

                                   gACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCt                                                                 <  2:2308117/100‑1 (MQ=255)

                                    aCGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTg                                                                <  2:2660940/100‑1 (MQ=255)

                                     cGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGa                                                               >  1:3548762/1‑100 (MQ=255)

                                       tgaagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAg                                                             >  2:2867153/1‑100 (MQ=255)

                                       tgaagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAg                                                             >  1:3674449/1‑100 (MQ=255)

                                       tgaagctgaagcAAAAGAGATTTTACATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAg                                                             >  1:3252108/1‑100 (MQ=255)

                                        gaagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGa                                                            >  1:2676071/1‑100 (MQ=255)

                                         aagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGAt                                                           >  2:1308770/1‑100 (MQ=255)

                                            ctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGa                                                        <  1:631788/100‑1 (MQ=255)

                                            ctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGa                                                        <  1:1724444/100‑1 (MQ=255)

                                             tgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGAt                                                       >  1:4307668/1‑100 (MQ=255)

                                             tgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGAt                                                       >  2:285455/1‑100 (MQ=255)

                                             tgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGAt                                                       >  2:33394/1‑100 (MQ=255)

                                             tgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGAt                                                       >  2:693933/1‑100 (MQ=255)

                                              gacgcAAAAGAGACGATGCATCAACTCATGCAACAGCGCGGTATCTACCCCATTGCCGCGGCACAACGCATCTGCGGCGAGTCTGAGCTGAAGACTGAt                                                       >  1:1864108/4‑99 (MQ=255)

                                              gaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATa                                                      <  1:3164297/100‑1 (MQ=255)

                                               aagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATaa                                                     <  2:4288344/100‑1 (MQ=255)

                                                agcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGGTTATACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATaaa                                                    <  1:630005/100‑1 (MQ=255)

                                                 gcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAg                                                   >  2:1189052/1‑100 (MQ=255)

                                                 gcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAg                                                   <  2:3064518/100‑1 (MQ=255)

                                                 gcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAg                                                   >  1:2382415/1‑100 (MQ=255)

                                                  cAAAAGAGATTTTGCATCAACTCATGCTACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgc                                                  >  1:3745736/1‑100 (MQ=255)

                                                  cAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgc                                                  >  2:4392592/1‑100 (MQ=255)

                                                  cAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgc                                                  >  1:111493/1‑100 (MQ=255)

                                                   aaaaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGGGTATGAGCTGAAGATTGATAAAgcg                                                 >  1:829980/1‑100 (MQ=255)

                                                   aaaaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgcg                                                 <  2:2159536/100‑1 (MQ=255)

                                                   aaaaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgcg                                                 >  2:1788980/1‑100 (MQ=255)

                                                    aaaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgcgc                                                >  1:1285496/1‑100 (MQ=255)

                                                     aaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGcgcc                                               >  2:2512221/1‑100 (MQ=255)

                                                       gagaTTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGcgccgc                                             >  1:2560332/1‑100 (MQ=255)

                                                       gagaTTTTGCATCAACACATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGcgccgc                                             <  1:3804954/100‑1 (MQ=255)

                                                         gaTTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAg                                           >  1:3566009/1‑100 (MQ=255)

                                                          aTTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGAACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCa                                            >  2:1515660/1‑98 (MQ=255)

                                                              tGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGt                                      <  2:3159679/100‑1 (MQ=255)

                                                                cATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTg                                    >  2:3701226/1‑100 (MQ=255)

                                                                 aTCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGa                                   >  2:3825106/1‑100 (MQ=255)

                                                                  tCAACTCATGCAACAGCGTGGTTTCTACCCGATGgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaataaatccg                                  <  1:2780816‑M2/100‑67 (MQ=255)

                                                                  tCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTgcc                                  <  1:3425529/100‑3 (MQ=255)

                                                                  tCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGAc                                  >  1:3634181/1‑100 (MQ=255)

                                                                      cTCATGCAACAGCGTGGTTTCTACCCGATGgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaataaatcctcct                               <  1:1652386‑M2/99‑70 (MQ=255)

                                                                        cATGCAACAGCGTGGTTTCTACCCGATGgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaataaatccgcctgcc                            <  1:2937553‑M2/100‑73 (MQ=255)

                                                                        cATGCAACAGCGTGGTTTCTACCCGATGgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagcaataaatccgcctgcc                            <  1:1773834‑M2/100‑73 (MQ=255)

                                                                          tGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCt                          >  2:3797656/1‑100 (MQ=255)

                                                                          tGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCt                          <  2:2121644/100‑1 (MQ=255)

                                                                           gCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTg                         <  2:2603710/100‑1 (MQ=255)

                                                                           gCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTg                         <  1:994575/100‑1 (MQ=255)

                                                                            cAACAGCGTGGTTTCTACCCGATGGTTGCAGCCCAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATGAAGCGCCGCAGAATGTTGCCAGCGCCCTGa                        >  1:1822359/1‑100 (MQ=255)

                                                                            cAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGa                        >  1:2167665/1‑100 (MQ=255)

                                                                            cAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGa                        >  1:1593004/1‑100 (MQ=255)

                                                                             aaCAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGAc                       <  1:3050501/100‑1 (MQ=255)

                                                                             aaCAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGAc                       <  1:672169/100‑1 (MQ=255)

                                                                               ctgCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTc                     <  2:4059044/98‑1 (MQ=255)

                                                                                 gCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAg                   >  2:2542644/1‑100 (MQ=255)

                                                                                 gCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAg                   >  1:4013618/1‑100 (MQ=255)

                                                                                   gTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAggg                 <  2:417013/100‑1 (MQ=255)

                                                                                    tGGTTTCTACCCGATGGTTGCAGCACAACGCATCGTCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGCATGTTGACAGCCCCCTGACTCAgggc                <  1:905603/100‑2 (MQ=255)

                                                                                     ggTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGc               >  1:546646/1‑100 (MQ=255)

                                                                                        ttCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCgg            <  2:931781/100‑1 (MQ=255)

                                                                                         tCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGga           <  1:1551087/100‑1 (MQ=255)

                                                                                         tCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGga           <  2:1005162/100‑1 (MQ=255)

                                                                                          cTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGgag          >  2:3258298/1‑100 (MQ=255)

                                                                                           tACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGgaga         >  1:4356849/1‑100 (MQ=255)

                                                                                           tACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGgaga         <  2:1704745/100‑1 (MQ=255)

                                                                                           tACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCACTGACTCAGCGGCCGgaga         >  1:121207/1‑100 (MQ=255)

                                                                                            aCCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGAt        >  2:587852/1‑100 (MQ=255)

                                                                                             cccGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATg       >  1:4101352/1‑100 (MQ=255)

                                                                                              ccGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATgg      <  1:3877116/100‑1 (MQ=255)

                                                                                                gATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGgcg    <  2:485163/100‑1 (MQ=255)

                                                                                                gATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGgcg    >  1:3335919/1‑100 (MQ=255)

                                                                                                  tGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGgcgcg  <  1:4146019/100‑1 (MQ=255)

GCGTTACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCG  >  NC_000913/4631776‑4631973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.