New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 734728 =NA (NA)37 (0.250) 12/170 NT 35.0% pseudogene (596/1521 nt) rhsO pseudogene, Rhs family
?NC_000913 734759 = 72 (0.460)pseudogene (627/1521 nt) rhsO pseudogene, Rhs family

Only 100 of 175 total aligned reads displayed.

GCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCG  >  NC_000913/734660‑734858
                                                                                                   |                                                                                                   
tcaggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgg                                                                                                     <  1:3818038‑M2/1‑1 (MQ=255)
tcaggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgg                                                                                                     <  2:4310746‑M2/1‑1 (MQ=255)
tcaggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgg                                                                                                     <  1:1597800‑M2/1‑1 (MQ=255)
gCAGCGCCGCAGCCTGGCGGGTACCCTTCAGCAGCCCTGCGTCGAAGACGGTGGCAGTGTGGTGTTACCGCCGGTGCTGGTCCAGATGCTCGACCGGCTg                                                                                                     <  1:1013048/100‑1 (MQ=11)
 caggccgcccgctgccacccagcggcggctttcctcactcacccggtcagccaggataacacattccagccggtcgcgcatctgcaccagcaccggcggg                                                                                                    <  1:1741989‑M2/2‑1 (MQ=255)
 caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg                                                                                                    <  2:204143‑M2/2‑1 (MQ=255)
 caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg                                                                                                    <  1:3794848‑M2/2‑1 (MQ=255)
 caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg                                                                                                    >  2:1762267‑M2/99‑100 (MQ=255)
 caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg                                                                                                    >  1:2291466‑M2/99‑100 (MQ=255)
 caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg                                                                                                    <  1:2175900‑M2/2‑1 (MQ=255)
 caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg                                                                                                    >  1:157378‑M2/99‑100 (MQ=255)
 caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg                                                                                                    <  1:4331783‑M2/2‑1 (MQ=255)
 caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg                                                                                                    >  2:908693‑M2/99‑100 (MQ=255)
 caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactgtccagccggtcgaccatctgcaccagcaccggcggg                                                                                                    <  1:2551838‑M2/2‑1 (MQ=255)
 cAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTgg                                                                                                    >  1:3883749/1‑100 (MQ=33)
 cAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTgg                                                                                                    >  1:2755132/1‑100 (MQ=33)
  aggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGa                                                                                                   <  1:1199224‑M2/3‑1 (MQ=255)
  aggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGa                                                                                                   <  2:3248238‑M2/3‑1 (MQ=255)
  aggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGa                                                                                                   <  1:168435‑M2/3‑1 (MQ=255)
  aggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGa                                                                                                   <  1:17175‑M2/3‑1 (MQ=255)
  aggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGa                                                                                                   <  2:2528056‑M2/3‑1 (MQ=255)
  aggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGa                                                                                                   <  2:3425257‑M2/3‑1 (MQ=255)
  aggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGa                                                                                                   >  2:170999‑M2/98‑100 (MQ=255)
   ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgg                                                                                                     >  1:109468‑M2/97‑97 (MQ=255)
   ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa                                                                                                  >  1:1189042‑M2/97‑100 (MQ=255)
   ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa                                                                                                  >  1:4328627‑M2/97‑100 (MQ=255)
   ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa                                                                                                  >  1:2877689‑M2/97‑100 (MQ=255)
   ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa                                                                                                  <  1:2083067‑M2/4‑1 (MQ=255)
   ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa                                                                                                  <  1:2967651‑M2/4‑1 (MQ=255)
   ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa                                                                                                  >  2:4397587‑M2/97‑100 (MQ=255)
   ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa                                                                                                  >  1:1496132‑M2/97‑100 (MQ=255)
     gccgcAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAg                                                                                                >  2:3624700/1‑100 (MQ=33)
     gccgcAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAg                                                                                                <  1:1215709/100‑1 (MQ=32)
      ccgcAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGt                                                                                               >  2:282481/1‑100 (MQ=33)
       gcactatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtctagcatctgcaccagcaccggcgGGaa                                                                                                  <  1:1269689‑M2/4‑1 (MQ=255)
          aGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGaaa                                                                                           <  1:3384628/100‑1 (MQ=32)
          aGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGaaa                                                                                           >  2:116034/1‑100 (MQ=33)
           gCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAt                                                                                          >  2:3636198/1‑100 (MQ=32)
            atgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggcgacacc                                                                                              >  1:71797‑M2/88‑88 (MQ=255)
             cTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATcc                                                                                        >  2:2630599/1‑100 (MQ=33)
              tGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCt                                                                                       >  2:1085820/1‑100 (MQ=33)
               ggCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTg                                                                                      <  2:4384915/100‑1 (MQ=32)
                gCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTgg                                                                                     <  1:1718408/100‑1 (MQ=33)
                  ggATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCt                                                                                   <  2:211622/100‑1 (MQ=33)
                  ggATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCt                                                                                   <  1:2485502/100‑1 (MQ=32)
                   gATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTg                                                                                  >  2:71627/1‑100 (MQ=32)
                   gATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTg                                                                                  <  1:1015405/100‑1 (MQ=33)
                                                  gccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCgctggct                                                   >  1:409485‑M2/50‑100 (MQ=255)
                                                         atttcactttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCg                                            >  2:2721930‑M2/43‑100 (MQ=255)
                                                            cactttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGc                                         >  1:3576318‑M2/40‑100 (MQ=255)
                                                             actttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCg                                        >  2:3953135‑M2/39‑100 (MQ=255)
                                                             actttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCg                                        >  2:2677046‑M2/39‑100 (MQ=255)
                                                              ctttccagccggtcgagcatctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                       >  2:3412860‑M2/38‑100 (MQ=255)
                                                              ctttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                       >  2:1991797‑M2/38‑100 (MQ=255)
                                                              actttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                       >  2:2746932‑M2/38‑100 (MQ=255)
                                                               tttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGc                                      >  2:4269196‑M2/37‑100 (MQ=255)
                                                               ctttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGc                                      >  2:1126806‑M2/37‑100 (MQ=255)
                                                                tttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGcc                                     >  2:4063938‑M2/36‑100 (MQ=255)
                                                                 ttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCt                                    >  2:1589251‑M2/35‑100 (MQ=255)
                                                                 tccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGAGCGAGTGAGGAAAGCCGCCGCTGGCTGGCATcgtac                                         >  1:797237‑M2/35‑93 (MQ=255)
                                                                  ccagccggtcgagcatctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTg                                   >  2:1038190‑M2/34‑100 (MQ=255)
                                                                  ccagccggtcgagcatctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTg                                   >  2:734402‑M2/34‑100 (MQ=255)
                                                                  ccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTg                                   >  2:227563‑M2/34‑100 (MQ=255)
                                                                   ccagccggtcgagcatctgcaccgtgccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGa                                  >  1:1855909‑M2/33‑100 (MQ=255)
                                                                   cagccggtcgagcatctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGa                                  >  2:3461151‑M2/33‑100 (MQ=255)
                                                                          tGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGa                           <  2:1485056/100‑1 (MQ=11)
                                                                           cgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAg                          >  1:2939218‑M2/25‑100 (MQ=255)
                                                                            cTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGc                         <  2:2508804/100‑1 (MQ=32)
                                                                              ggTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGCGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCa                        >  1:4081327/1‑99 (MQ=17)
                                                                               gTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGa                      >  2:773646/1‑100 (MQ=33)
                                                                                tGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCTGGTAAGAGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAg                       >  1:681761/1‑98 (MQ=255)
                                                                                tGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGAt                     <  2:3132405/100‑1 (MQ=32)
                                                                                 gCAGATGCTCGACCGGCTGGAAAGTGAAATCTTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATg                    <  1:3838107/100‑1 (MQ=17)
                                                                                 gCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATg                    >  2:181568/1‑100 (MQ=33)
                                                                                 gCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATg                    >  1:324384/1‑100 (MQ=32)
                                                                                   aGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCa                  >  2:2604845/1‑100 (MQ=32)
                                                                                   aGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCa                  >  2:1931322/1‑100 (MQ=33)
                                                                                    gATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCaa                 >  1:460915/1‑100 (MQ=32)
                                                                                    gATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCaa                 <  2:3045616/100‑1 (MQ=32)
                                                                                       gCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCaaaa               >  1:1450738/1‑99 (MQ=32)
                                                                                        cTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAAcc             <  1:727754/100‑1 (MQ=33)
                                                                                        cTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAAcc             >  1:3936438/1‑100 (MQ=32)
                                                                                         tCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCa            >  1:3568988/1‑100 (MQ=33)
                                                                                         tCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCa            <  1:1450561/100‑1 (MQ=33)
                                                                                         tCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCa            >  2:1256517/1‑100 (MQ=33)
                                                                                          cGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAg           <  2:3769714/100‑1 (MQ=32)
                                                                                          cGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCAGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAg           >  1:4280294/1‑100 (MQ=18)
                                                                                           gACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAg           <  1:1254767/99‑1 (MQ=33)
                                                                                           gACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGa          >  1:2587063/1‑100 (MQ=33)
                                                                                            aCCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCagatcggaag         >  1:4120479/1‑91 (MQ=255)
                                                                                            aCCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGAt         <  2:642258/100‑1 (MQ=33)
                                                                                            aCCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGAt         <  2:2773464/100‑1 (MQ=33)
                                                                                            aCCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGAt         <  2:3343808/100‑1 (MQ=33)
                                                                                               ggCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGa      <  2:2120522/100‑1 (MQ=32)
                                                                                                 cTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGAcc    >  2:628449/1‑100 (MQ=33)
                                                                                                  tGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGAccc   >  1:1550548/1‑100 (MQ=32)
                                                                                                  tGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGAccc   <  1:2451209/100‑1 (MQ=33)
                                                                                                  tGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGAccc   <  2:3513555/100‑1 (MQ=33)
                                                                                                   GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCg  >  2:383732‑M2/1‑100 (MQ=255)
                                                                                                   GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCg  >  1:4191957‑M2/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCG  >  NC_000913/734660‑734858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.