Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,770,205 T→A 18.8% intergenic (+19/‑410) ydiK → / → ydiL UPF0118 family inner membrane protein/putative HTH domain DNA‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,770,2050TA18.8% 259.2 / 46.7 111intergenic (+19/‑410)ydiK/ydiLUPF0118 family inner membrane protein/putative HTH domain DNA‑binding protein
Reads supporting (aligned to +/- strand):  ref base T (50/40);  new base A (4/17);  total (54/57)
Fisher's exact test for biased strand distribution p-value = 3.21e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 118 total aligned reads displayed.

GTGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCGCAAATTCT  >  NC_000913/1770106‑1770304
                                                                                                   |                                                                                                   
gtggAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGctct                                                                                                     >  1:1014526/1‑100 (MQ=255)
   gaagaaGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTgcc                                                                                                  >  1:3222431/1‑100 (MQ=255)
   gaagaaGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTgcc                                                                                                  <  1:2248182/100‑1 (MQ=255)
   aaagaagTCCCGCTGCCGACGGACCAACCGGCAGAAATTCTCGAAGAACTCGGCGAAATCGAGAAACCGACTACGTACTTTCCCATTAGGCGGCTCTgc                                                                                                   >  1:3894950/2‑99 (MQ=255)
     agaagTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTgccgc                                                                                                >  2:451590/1‑100 (MQ=255)
      gaagTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTgccgcc                                                                                               <  1:3220261/100‑1 (MQ=255)
      gaagTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTgccgcc                                                                                               >  2:544168/1‑100 (MQ=255)
       aagTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCt                                                                                              <  1:1613640/100‑1 (MQ=255)
       aagTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCt                                                                                              <  1:4212729/100‑1 (MQ=255)
         gTCCCGCCGCCGAGGGACCAACCGGAAGAAATTCTCGAAGAACGTGCCGAAAGCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGa                                                                                            <  1:696661/100‑1 (MQ=255)
         gTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGa                                                                                            <  1:1292311/100‑1 (MQ=255)
         gTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACGTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGa                                                                                            <  1:3717494/100‑1 (MQ=255)
          tCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGa                                                                                            <  1:210857/99‑1 (MQ=255)
          tCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGAt                                                                                           <  2:2334569/100‑1 (MQ=255)
          tCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGAt                                                                                           <  2:2614414/100‑1 (MQ=255)
          tCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAt                                                                                           <  1:2809441/100‑1 (MQ=255)
          tCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAt                                                                                           <  1:3227959/100‑1 (MQ=255)
          tCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAt                                                                                           <  1:2665575/100‑1 (MQ=255)
           cccGCCGCCGATGTACCAACCGGAAGAAATTCTCGAAGAACTCGGCCAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGa                                                                                            <  1:696551/98‑1 (MQ=255)
           cccGCCGCCGACGGACCAACTGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAtg                                                                                          <  2:483220/100‑2 (MQ=255)
           cccGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGGATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAtg                                                                                          <  2:3255682/100‑2 (MQ=255)
           cccGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAtg                                                                                          <  2:2031582/100‑2 (MQ=255)
           cccGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAtg                                                                                          <  1:2992251/100‑2 (MQ=255)
            ccgccgccgACGGACCAAGCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAtg                                                                                          <  2:4301351/99‑2 (MQ=255)
            ccgccgccgACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTg                                                                                         >  2:1078065/1‑100 (MQ=255)
            ccgccgccgACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTg                                                                                         <  2:2030981/100‑1 (MQ=255)
             cgccgccgACGGACCCACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAtga                                                                                         <  1:68185/99‑3 (MQ=38)
             cgccgccgACGGACCAACCGGAAGAAATTCTCGAATAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAtn                                                                                          <  1:1300557/98‑2 (MQ=255)
             cgccgccgACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGt                                                                                        <  2:697268/100‑1 (MQ=255)
             cgccgccgACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGt                                                                                        <  2:2056123/100‑1 (MQ=255)
             cgccgccgACGGACCAAACGGAAGAATTTCTCGAAGATCTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAtgag                                                                                        <  1:4126577/100‑4 (MQ=37)
                cgccgACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTaa                                                                                     >  2:4006084/1‑100 (MQ=255)
                cgccgACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAtga                                                                                         <  1:2734171/96‑3 (MQ=39)
                   cgACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAacca                                                                                  >  1:3301330/1‑100 (MQ=255)
                    gACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAacc                                                                                   <  1:322400/98‑1 (MQ=255)
                     aCGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAaccacc                                                                                <  1:3516680/100‑1 (MQ=255)
                       ggACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGc                                                                              <  1:4006057/100‑1 (MQ=255)
                       ggACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGc                                                                              <  2:2045045/100‑1 (MQ=255)
                         aCCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTa                                                                            >  2:1379107/1‑100 (MQ=255)
                            aaCCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAAtt                                                                         >  2:1917374/1‑100 (MQ=255)
                            aaCCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAAtt                                                                         <  1:2037822/100‑1 (MQ=255)
                            aaCCGGAAGAAATACTCGAAGAACTTGGCGAGATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAAtt                                                                         >  2:2964509/1‑100 (MQ=255)
                             aCCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTg                                                                        <  1:3537453/100‑1 (MQ=255)
                                ggAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGata                                                                     >  2:1216519/1‑100 (MQ=255)
                                  aagaaATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATAtt                                                                   >  2:3611539/1‑100 (MQ=255)
                                    gaaATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCGCTGCAGCCTGATTGTAAACCACCGCTAATTGatcat                                                                   >  1:4088178/1‑95 (MQ=255)
                                      aaTTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATttgct                                                               >  1:2428510/1‑100 (MQ=255)
                                       aTTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATttgctt                                                              <  1:4024402/100‑1 (MQ=255)
                                       aTTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATttgctt                                                              <  2:3224430/100‑1 (MQ=255)
                                         tctcGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATttgcttgc                                                            <  1:3107565/100‑1 (MQ=255)
                                          ctcGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTtgcttgct                                                           >  2:67226/1‑100 (MQ=255)
                                            cGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTCACCACCGCTAATTGATATTTGCTTGctct                                                         >  1:478665/1‑100 (MQ=255)
                                            cGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGctct                                                         >  2:374542/1‑100 (MQ=255)
                                             gaagaaCTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCtt                                                        >  2:217289/1‑100 (MQ=255)
                                                gaaCTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTccc                                                     <  2:3646919/100‑1 (MQ=255)
                                                gaaCTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTccc                                                     <  2:1442172/100‑1 (MQ=255)
                                                gaaCTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTccc                                                     >  1:196024/1‑100 (MQ=255)
                                                gaaCTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTcc                                                      <  1:404503/99‑1 (MQ=255)
                                                    ttGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACGACCGCTAATTGATATTTGCTTGCTCATACCCata                                                 >  1:1630875/1‑100 (MQ=255)
                                                       gCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTCATTGATATTTGCTTGCTCTTCCCCATAtt                                               >  1:3555740/1‑99 (MQ=255)
                                                        cGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATAtttt                                             >  1:517589/1‑100 (MQ=255)
                                                        cGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATAtttt                                             >  2:79610/1‑100 (MQ=255)
                                                          aaaTCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTcc                                           <  2:1315540/100‑1 (MQ=255)
                                                            aTCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTg                                         >  1:3789555/1‑100 (MQ=255)
                                                             tCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGc                                        <  2:2860405/100‑1 (MQ=255)
                                                             tCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGc                                        <  1:2141630/100‑1 (MQ=255)
                                                              cGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCt                                       >  2:3668927/1‑100 (MQ=255)
                                                              cGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCt                                       >  2:2935746/1‑100 (MQ=255)
                                                              agagaAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGACATTTGCTTGCTCCTCCCCATATTTTCCTGCt                                       >  1:1611457/2‑100 (MQ=255)
                                                               gagaAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCtt                                      >  2:488341/1‑100 (MQ=255)
                                                                agaAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTa                                     <  1:226733/100‑1 (MQ=255)
                                                                agaAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTa                                     >  2:3179925/1‑100 (MQ=255)
                                                                agaAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTa                                     <  2:3108153/100‑1 (MQ=255)
                                                                     ccGAATAAGTAATTTCTCATCAGGTGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGcc                                >  1:2684252/1‑100 (MQ=255)
                                                                     ccGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGcc                                <  1:2958061/100‑1 (MQ=255)
                                                                       gAATAAGTAATTTCTCATCAGGCGGCTCTGCCGTCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCAt                              <  1:1154303/100‑1 (MQ=255)
                                                                             gTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCt                        >  2:2281170/1‑100 (MQ=255)
                                                                             gTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCt                        <  1:4316272/100‑1 (MQ=255)
                                                                                 tttCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGgta                    <  1:909195/100‑1 (MQ=255)
                                                                                 tttCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGgta                    >  2:2612721/1‑100 (MQ=255)
                                                                                   tctcATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGgtagt                  >  1:1880085/1‑100 (MQ=255)
                                                                                    acaatcaGGCGGCAGAGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGgtagta                 >  1:439145/4‑100 (MQ=38)
                                                                                     tcatcaGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTAc                >  1:3325800/1‑100 (MQ=255)
                                                                                     tcatcaGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCACTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTAc                >  1:2811444/1‑100 (MQ=255)
                                                                                     tcatcaGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCATGCTCTTCCACATATATTCCTGCTCACCGCCATTCAGCTGGTAGTAc                >  1:2976928/1‑100 (MQ=255)
                                                                                      catcaGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTAcc               >  2:2278090/1‑100 (MQ=255)
                                                                                      catcaGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTAcc               >  1:3459018/1‑100 (MQ=255)
                                                                                       atcaGGCGGCAGAGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCt              >  1:1150158/1‑100 (MQ=255)
                                                                                       atcaGGCGGCAGAGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCt              >  2:2785352/1‑100 (MQ=255)
                                                                                          aGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTc           >  2:3994909/1‑100 (MQ=255)
                                                                                          aGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTc           <  2:112881/100‑1 (MQ=255)
                                                                                           ggcggcTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCg          >  2:3750900/1‑100 (MQ=255)
                                                                                           ggcggcTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCg          >  2:2495007/1‑100 (MQ=255)
                                                                                              ggcTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCGCaa       >  1:618403/1‑100 (MQ=255)
                                                                                               gcTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCGCaaa      <  2:4075715/100‑1 (MQ=255)
                                                                                                ctctGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCGCAAAt     <  2:336419/100‑1 (MQ=255)
                                                                                                ctctGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCGCAAAt     <  2:2259590/100‑1 (MQ=255)
                                                                                                  ctGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCGCAAATTc   <  1:1216514/100‑1 (MQ=255)
                                                                                                   tGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCGCAAATTCt  >  2:1810140/1‑100 (MQ=255)
                                                                                                   tGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTAGCAAATTCt  >  1:2616719/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GTGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCGCAAATTCT  >  NC_000913/1770106‑1770304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: