| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,131,524 | A→G | 15.7% | S295S (AGT→AGC) | yghQ ← | putative inner membrane polysaccharide flippase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,131,524 | 0 | A | G | 15.7% | 392.1 / 65.5 | 183 | S295S (AGT→AGC) | yghQ | putative inner membrane polysaccharide flippase |
| Reads supporting (aligned to +/- strand): ref base A (64/90); new base G (21/8); total (85/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.90e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.24e-03 | |||||||||||
Only 100 of 198 total aligned reads displayed.
CACCAGAATACCGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACC > NC_000913/3131425‑3131623 | accaGAATACCGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAAc < 2:1474369/100‑1 (MQ=255) aGAATACCGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACttt < 2:3001021/100‑1 (MQ=255) gAATACCGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCCCGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACttt < 1:601479/99‑1 (MQ=255) aTACCGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTAc < 2:2864926/100‑1 (MQ=255) aTACCGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTAc < 2:786622/100‑1 (MQ=255) aTACCGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTAc < 1:30544/100‑1 (MQ=255) aCCGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAGTTTTTAccc < 2:3229340/100‑1 (MQ=255) cGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAGTTTTTACCCAg < 1:1993795/100‑1 (MQ=255) cGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAGTTTTTACCCAg < 2:2916085/100‑1 (MQ=255) cGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAg < 2:2344551/100‑1 (MQ=255) cGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAg < 1:3682696/100‑1 (MQ=255) aTTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCa < 2:3842686/100‑1 (MQ=255) tCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCaaa < 2:2444376/100‑1 (MQ=255) tCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGACCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCaaa < 1:228140/100‑1 (MQ=255) ccgcccgcCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAGTTTTTACCCAgaggt < 1:117313/99‑5 (MQ=39) ccgcccgcCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAAc > 2:2090546/1‑100 (MQ=255) cgcgcgccAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAAcc < 1:2549216/100‑1 (MQ=255) cgcccgccAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAAcc > 1:447209/1‑100 (MQ=255) cgcccagcAGTAAACCGCACTTCACACCTAACACGCCCGGTCTGGTGGCGCGCGGATCTAAACGCATCTCCTCTAGGTAAAAGTTTTTACCCAgagg < 1:2908155/97‑4 (MQ=255) gcccgccAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAAccc > 1:3282434/1‑100 (MQ=255) cccgccAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCg > 1:1863096/1‑100 (MQ=255) ccgccAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCCCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGc < 1:2153056/100‑1 (MQ=255) ccAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCTCCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTgg < 1:2339630/100‑1 (MQ=255) ccAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTgg < 2:527996/100‑1 (MQ=255) cAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGc > 1:3564430/1‑100 (MQ=255) aGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCg > 2:3388679/1‑100 (MQ=255) aCCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTcc > 1:2873704/1‑99 (MQ=255) cGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCcggc < 1:2480990/100‑1 (MQ=255) cGGACTTCACACCTAACAACCACAATCTGGTGGTGCGCGGATCTAAACGCATCACCTCTAGGTAAAAAATTTTACCCAGCAAACCCGCTGGCg > 1:1609280/1‑93 (MQ=255) cTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGgcggcg < 1:3034018/100‑1 (MQ=255) ttCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGt > 2:3136389/1‑100 (MQ=255) cacaCCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCg < 2:4151644/100‑1 (MQ=255) acacCTAACAACCCCGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCga < 2:854756/100‑1 (MQ=255) cTAACAACCACGGTCTGGTGGTGCGGGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCgaagaa < 1:622728/100‑1 (MQ=255) cTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCgaagaa < 1:2688164/100‑1 (MQ=255) tAACAACCACGGTCTGGTGGTGCGCGGATATAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGCTCCGGCGGCGTCgaaga > 1:1020431/1‑98 (MQ=255) caacCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTc < 1:208864/100‑1 (MQ=255) acCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCAt > 2:4260398/1‑100 (MQ=255) acCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCAt > 1:2740260/1‑100 (MQ=255) ccACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATg > 2:3544398/1‑100 (MQ=255) ccACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATg > 1:427213/1‑100 (MQ=255) cACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATgg > 2:4320569/1‑100 (MQ=255) aCGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGc < 2:1897629/100‑1 (MQ=255) ggTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGa > 2:56731/1‑100 (MQ=255) gTCTGGTGGTGCGCGGATCTAAACGCGTCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGc < 1:2636786/97‑1 (MQ=255) tggtgCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTaaa < 1:76564/100‑1 (MQ=255) ggtgCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAAt < 2:2195555/100‑1 (MQ=255) ggtgCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAAt > 2:72924/1‑100 (MQ=255) gtgCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATa < 2:888205/100‑1 (MQ=255) tgCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATaa < 1:4168980/100‑1 (MQ=255) gcgcGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAAc > 1:1331941/1‑100 (MQ=255) gcgaGGATCTAAACGCACCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATa < 2:3987674/98‑1 (MQ=255) cgGATCTAAACGCATCACCTCTGGGTCAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCcg > 2:2676339/1‑100 (MQ=255) cgGATCTAAACGCATCACCTCTGGGGAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAAcc > 1:3896709/1‑98 (MQ=255) tCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCcggcgg < 1:2418379/100‑1 (MQ=255) tCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCcggcg < 1:374404/99‑1 (MQ=255) cTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCggcggc > 2:3812803/1‑100 (MQ=255) tAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCggcggc > 2:1838694/1‑99 (MQ=255) tAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCa > 2:2027805/1‑100 (MQ=255) aaaCGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAg > 1:1390115/1‑100 (MQ=255) aaaCGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAg > 2:1492994/1‑100 (MQ=255) aaaCGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAg > 1:4221387/1‑100 (MQ=255) ncGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCg > 1:3591377/2‑100 (MQ=255) cGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGc < 2:1632848/98‑1 (MQ=255) cGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCgg < 1:1727789/100‑1 (MQ=255) gCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCggg < 2:4280238/100‑1 (MQ=255) cATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGt < 2:2613201/100‑1 (MQ=255) cATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGt > 2:3345325/1‑100 (MQ=255) cATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCACCGGGt > 1:4065615/1‑100 (MQ=255) aTCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTc < 2:1548949/100‑1 (MQ=255) tCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTcc < 2:1606657/100‑1 (MQ=255) cACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATACCCCGGCGGCAGCGGGTcc < 1:3872464/99‑1 (MQ=255) aCCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTa < 1:501098/100‑1 (MQ=255) ccTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCg < 1:805359/92‑1 (MQ=255) ctctGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAac < 2:4024086/100‑1 (MQ=255) ctctGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAac > 1:366014/1‑100 (MQ=255) ctctGGGTAAAAACATTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAac < 1:2994839/100‑1 (MQ=255) tctGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAaca > 1:752530/1‑100 (MQ=255) ctGGGTAAAAGTTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAacgc > 2:2264840/1‑98 (MQ=255) ctGGGTAAAAGTTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAacac > 1:92574/1‑100 (MQ=255) ctGGGTAAAAGTTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAacac > 2:3869597/1‑100 (MQ=255) ctGGGTAAAAGTTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAacac > 2:4081396/1‑100 (MQ=255) ctGGGTAAAAGTTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAacac > 2:4164351/1‑100 (MQ=255) ctGGGTAAAAGTTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAacac > 2:1297294/1‑100 (MQ=255) ctGGGTAAAAGTTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAacac > 2:1255989/1‑100 (MQ=255) ctGGGTAAAAGTTTTTACCCAGCAAACCCGCTAGCGTTCCGGCGGCGTCGAAGAATGGCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAaca > 1:2066450/1‑99 (MQ=255) tGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACg < 1:4257502/100‑1 (MQ=255) tGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCCTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGTGTCGTAACACg < 1:2313017/100‑1 (MQ=255) gggTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGa > 1:3204688/1‑100 (MQ=255) gggTAAAAACTTTTACCCAGCAAACACGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATATTAAATAACACGGCGGCAGCGGGTCCTAACACGa > 1:4002480/1‑100 (MQ=255) aggTAAAAACTTTTACCCAGCAAACCCGCTCGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGACCTAACACGa > 1:2885848/2‑100 (MQ=255) ggTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGAt > 1:3348555/1‑100 (MQ=255) tAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATcc < 1:2262586/100‑1 (MQ=255) naaaCTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATcccc > 2:2767002/2‑100 (MQ=255) aaaaCTTTTACCCATCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATcccc > 1:2582494/1‑100 (MQ=255) aaaaCTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATcccc > 2:44635/1‑100 (MQ=255) aaaaCTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATcccc < 1:2172048/100‑1 (MQ=255) aaaaCTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATcccc > 2:3632043/1‑100 (MQ=255) aCTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCccacc < 2:1952221/100‑1 (MQ=255) aCTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCccacc < 1:3530663/100‑1 (MQ=255) | CACCAGAATACCGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACC > NC_000913/3131425‑3131623 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |