| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,486,781 | G→A | 16.9% | intergenic (+29/‑10) | crp → / → yhfK | cAMP‑activated global transcription factor, mediator of catabolite repression/putative transporter, FUSC superfamily inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,486,781 | 0 | G | A | 16.9% | 454.8 / 76.6 | 196 | intergenic (+29/‑10) | crp/yhfK | cAMP‑activated global transcription factor, mediator of catabolite repression/putative transporter, FUSC superfamily inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (77/85); new base A (15/18); total (92/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.28e-01 | |||||||||||
Only 100 of 211 total aligned reads displayed.
TGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATGTTTGCCCGTGGC > NC_000913/3486682‑3486879 | tGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAg < 2:3584939/100‑1 (MQ=255)tGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAg < 1:2999817/100‑1 (MQ=255) gATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAgcgcg < 2:1409886/100‑1 (MQ=255) aTGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAgcgcgc > 2:658239/1‑100 (MQ=255) aTGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGCTACCAGGTAacgcgc < 2:3700442/100‑1 (MQ=255) aTGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAATGGCGCGCTACCAGGTAacgcgc < 2:3283270/100‑1 (MQ=255) tGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAACACCATCGTCGTTTACGGCACTCGTTAAACCCGTCGGAGTGGCGCGTTACATGGTAgcccg > 1:3372059/1‑98 (MQ=255) tGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGCTACCAGGTAACGCGcc < 2:2595258/100‑1 (MQ=255) tGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGCTACCAGGTAACGCGcc < 2:4369824/100‑1 (MQ=255) gcgggAAGATCAGAGCCTGATCGCCGCAGACGGTAAAACCATCGTCGGTTACGGCACTCGGTAATCCCGTCGGAGTGGCGCGCTACCAGGTAacgcggc < 1:1772785/96‑3 (MQ=255) gCTGGAAGATCAGCACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACGTGTTAATCCCGTCGGAGTGGCGCGCTACCAGGTAACGCGcc < 1:830258/99‑1 (MQ=255) gCTGGAAGATCAGAACCTGGTCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGCTACCAGGTAACGCGCCa < 2:1164078/100‑1 (MQ=255) gCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGCTACCAGGTAACGCGCCa < 2:2464154/100‑1 (MQ=255) gCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGCTACCAGGTAACGCGCCa < 2:1998979/100‑1 (MQ=255) cTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCAt > 2:2723419/1‑100 (MQ=255) cTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGCTACCAGGTAACGCGCCac < 2:2512831/100‑2 (MQ=39) ggAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCAttt > 1:42720/1‑100 (MQ=255) aGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGt < 1:2811152/100‑1 (MQ=255) aGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGt > 2:3772816/1‑100 (MQ=255) gATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGtt > 1:411970/1‑100 (MQ=255) gATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTAGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGtt > 2:685718/1‑100 (MQ=255) aTCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGttt > 2:2778585/1‑100 (MQ=255) aTCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGttt > 2:4076450/1‑100 (MQ=255) aTCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGtt < 2:3974243/99‑1 (MQ=255) cAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTcc > 2:1474992/1‑100 (MQ=255) aGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTcc < 2:271096/99‑1 (MQ=255) aaCCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTccccc < 2:2471121/100‑1 (MQ=255) cTGATCGCCGCGCACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGAt < 1:854165/100‑1 (MQ=255) tGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGAtg > 2:2488557/1‑100 (MQ=255) tGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGAtg < 2:2178128/100‑1 (MQ=255) aTCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGAtgtg > 2:902732/1‑100 (MQ=255) ccGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGgcgc < 2:2925747/100‑1 (MQ=255) ccGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGgcgc > 2:1323387/1‑100 (MQ=255) gCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAg < 2:333794/100‑1 (MQ=255) ctcacGGTAAAACCAGCGGCGTTTTCGGGACTCGTTATTTCCGTCTGAGTGGCGCGTTACCTGGTAGCGGGACATTTTGTTTCCCCCGATGTGGCGCAGa < 1:3292557/98‑1 (MQ=255) acacGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGAc < 2:354253/100‑1 (MQ=255) ggTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGAt < 2:55086/100‑1 (MQ=255) aaaaCCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTa > 1:1241096/1‑100 (MQ=255) aaCCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATc < 1:1806836/100‑1 (MQ=255) aaCCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATc > 1:2146124/1‑100 (MQ=255) ggcATCGTGGTTTACGGCACTCGTTAATCCTGTCGGAGTTGCGCGTTACCTCGTAGCGCGCCATTTTGTTTTCCCCGATGTGGCGCAGACTGAtt < 1:880289/93‑1 (MQ=255) ccATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCAc > 2:1046131/1‑100 (MQ=255) ccATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGCTTCCCCCGATGTGGCGCAGACTGATTTATCAc > 1:235845/1‑100 (MQ=255) ttccgatctcGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCg < 1:1960673/91‑1 (MQ=255) cgtcgtTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCg > 1:554714/1‑100 (MQ=255) cgtcgtTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCg < 1:797431/100‑1 (MQ=255) gtTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGatat < 2:1246214/100‑1 (MQ=255) gtTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGatat > 1:1710796/1‑100 (MQ=255) tttACGGCACTGGTTAATCCCGTCGGAGTTGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGat < 2:1075852/97‑1 (MQ=255) ttACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTCGCGTGCCATTTTGTTTCACACGATGTGGCGAAGACTGATTTATCACCCCGATATCa > 1:3344721/1‑100 (MQ=255) aCGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAAc < 1:1668329/100‑1 (MQ=255) aCGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAAc > 2:3328762/1‑100 (MQ=255) cGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACt < 2:4239612/100‑1 (MQ=255) ggCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTa > 2:860777/1‑100 (MQ=255) ggCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTa < 1:115884/100‑1 (MQ=255) gCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTAt < 2:3568112/100‑1 (MQ=255) gCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTAt < 2:2389788/100‑1 (MQ=255) gCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCACCGATGTGGCGCAGACTGATTTATCATCCCGATATCAACTAt > 1:3083233/1‑100 (MQ=255) cACTCGTTCCTCCCGTCGGAGTGGCGCGTTACCTGATAGCGCGTCATTTTGTTTCCCCCGATGTGTCGCAGACTGATTTATCACCCCGATATCAACTa < 1:1040146/98‑1 (MQ=255) cACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGTGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATg > 1:286234/1‑100 (MQ=255) cACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATg < 2:1656955/100‑1 (MQ=255) aCTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGc < 2:3059490/100‑1 (MQ=255) cTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGc < 1:2600721/99‑1 (MQ=255) tCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCAc > 2:1541163/1‑100 (MQ=255) cGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACt > 2:1780040/1‑100 (MQ=255) ttAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTc < 1:4009065/100‑1 (MQ=255) tAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCg > 2:829769/1‑100 (MQ=255) tAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCg < 1:3940847/100‑1 (MQ=255) aaTCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGa < 1:2188374/100‑1 (MQ=255) aaTCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGa < 2:3172924/100‑1 (MQ=255) aTCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGAc > 2:360162/1‑100 (MQ=255) tCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACa < 1:1343333/100‑1 (MQ=255) ccGTCTGAGTGGCGCGGTACCTGCGAGCACGCCAGTGTGGTACGCCCGGTGTGGCGCAGACTGATTAATGACCCCGATATCAACTATGCACTTCGACaa < 1:3730814/99‑1 (MQ=255) cGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAAc < 1:3669803/100‑1 (MQ=255) aaatGGCGCGCTACCAGGTAACGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTgg > 2:913514/4‑100 (MQ=38) aaatGGCGCGCTACCAGGTAACGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTgg > 1:256115/4‑100 (MQ=38) aaatGGCGCGCTACCAGGTAACGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTgg > 2:464874/4‑100 (MQ=38) aGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGt < 2:2414584/100‑1 (MQ=255) aGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGt < 1:3208243/100‑1 (MQ=255) atGGCGCGCTACCAGGTAACGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGGCAAACGCTGGTg > 2:3464691/2‑100 (MQ=38) tGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATCTCAACTATGCACTTCGACAAACGCTGGTGc > 1:4201290/1‑100 (MQ=255) tGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGc > 2:4162378/1‑100 (MQ=255) ggCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGca > 1:1051169/1‑99 (MQ=255) ggCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCt > 2:3007508/1‑100 (MQ=255) ggCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCt > 2:538052/1‑100 (MQ=255) ggCGCGCTACCAGGTAACGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTCTCACCCCGATATCAACTATGCACTTCGCCAAACGCTGGTGCt > 1:1530658/1‑100 (MQ=255) gcgTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATg < 1:3757320/100‑1 (MQ=255) gcgTTACCGGGTAGCGCGCCATTTTGTTTCTCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTa < 2:1735076/98‑1 (MQ=255) cgctACCAGGTAACGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATGt > 2:4037195/4‑100 (MQ=255) aCCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATGTTTGc < 1:261697/100‑1 (MQ=255) ccTGGTAGCGGGCCATTTTGTTTCCACCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATGTTTGcc < 2:42720/100‑1 (MQ=255) ccTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGCTGCTATGTTTGcc < 2:2989791/100‑1 (MQ=255) cTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATGTTTGccc > 1:676772/1‑100 (MQ=255) cTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATGTTTGcc < 1:3516522/99‑1 (MQ=255) tGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATGTTTGCCCg < 1:2488545/100‑1 (MQ=255) ggTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATGTTTGCCCGt > 2:1513462/1‑100 (MQ=255) tAGCGCGCCATGTTGTTCCCCCCGATGTGGCGCAGACCGACTTATCACCCCGATATCAACTCTGCACTTCGACAAACGCTGGTGCTATGTTTGCCCGTgg < 1:2626082/100‑1 (MQ=255) aGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATGTTTGCCCGTGGc < 2:432613/100‑1 (MQ=255) aGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATGTTTGCCCGTGGc < 2:2315031/100‑1 (MQ=255) aGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATGTTTGCCCGTGGc > 1:3181624/1‑100 (MQ=255) | TGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAATCCCGTCGGAGTGGCGCGTTACCTGGTAGCGCGCCATTTTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATGTTTGCCCGTGGC > NC_000913/3486682‑3486879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |