| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,794,970 | G→C | 15.8% | M14I (ATG→ATC) | waaF → | ADP‑heptose:LPS heptosyltransferase II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,794,970 | 0 | G | C | 15.8% | 528.4 / 84.9 | 196 | M14I (ATG→ATC) | waaF | ADP‑heptose:LPS heptosyltransferase II |
| Reads supporting (aligned to +/- strand): ref base G (72/92); new base C (19/12); total (91/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.11e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.58e-01 | |||||||||||
Only 100 of 216 total aligned reads displayed.
TGCTGAAGGTGTAACGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCATTATTATCGCGG > NC_000913/3794871‑3795069 | tGCTGAAGGTGTAACGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACatg > 2:3340583/1‑100 (MQ=255) cTGAAGGTGTAACGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACatgat > 1:2712771/1‑100 (MQ=255) tGAAGGTGTAACGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGGTCGGCCCGTCTTGGGTTGGCGACatgatg > 1:2635858/1‑100 (MQ=255) gAAGGTGTAACGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACatgatga > 2:226895/1‑100 (MQ=255) gAAGGTGTAACGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACatgatga > 2:1857197/1‑100 (MQ=255) aagtggAACGAAATACATGGCCTGCCTGAATCGCTACGCATAAGGGCTGGGCAGCAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACatgatgatg < 1:3306593/98‑1 (MQ=255) gtAACGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGc < 2:2253062/100‑1 (MQ=255) gtAACGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGc > 2:3298438/1‑100 (MQ=255) tAACGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATCATCATGTCGcc < 2:3721068/100‑2 (MQ=255) tAACGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATCATCATGTCGcc < 2:1844814/100‑2 (MQ=255) tAACGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATCATCATGTCGcc < 1:3288260/100‑2 (MQ=255) tAACGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATCATCATGTCGcc < 2:111210/100‑2 (MQ=255) tAACGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCACTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATCATCATGTCGcc < 2:689817/100‑2 (MQ=255) aaCGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCaa > 1:4248/1‑100 (MQ=255) aCGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCaaa > 1:1571990/1‑100 (MQ=255) cGGAATACATGGCCTGGCTGAATCGCGACGCATAAGATCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAg < 2:364673/100‑1 (MQ=255) cGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATCATCATGTCGCcaac < 2:3809259/100‑2 (MQ=255) gAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGtc < 1:87180/100‑1 (MQ=255) gAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGtc > 1:61096/1‑100 (MQ=255) gAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGtc < 2:2919572/100‑1 (MQ=255) aTACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGtctc < 1:3647546/100‑1 (MQ=255) aCATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTa < 1:3374836/100‑1 (MQ=255) cATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTa > 1:3923668/1‑99 (MQ=255) cATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTAt > 1:3465656/1‑100 (MQ=255) cATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGACCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTAt > 1:2207619/1‑100 (MQ=255) aTGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGCCATGATGATGTCGCAAAGTCTCTATc < 2:2672472/100‑1 (MQ=255) tGGCCTGGCTGAATCGCGACGCATAGGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCg < 2:3056722/100‑1 (MQ=255) ggCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAAGACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTCTCGc > 1:2407496/1‑100 (MQ=255) gCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGAGCGGCCCGTCTTGGGTTGTCGACATGATGAGGTCCCAAAGTCTCTATCGCa > 2:3455904/1‑100 (MQ=255) gCCTGGCTGAATCGCGACGCATAAGAGCGCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCa < 2:1443548/100‑1 (MQ=255) ccTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCGCGGCTTGGGTTGGCGACATGATGATGTCTCAAAGTCTCTATCGCAc > 1:3211945/1‑100 (MQ=255) ccTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCAc > 2:2455029/1‑100 (MQ=255) ccTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCAc < 2:536666/100‑1 (MQ=255) ccTGGCTAAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCAc > 2:2303840/1‑100 (MQ=255) tGGCTGAGTGGTGACGCATAAGAGCTCTGCATGAAAATACTGGGGATCGGCCCGTTTTTTGTTGGCGACATTATGATGTCGCAAAGTCTCTATCg < 1:1450815/95‑1 (MQ=255) tGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGc < 2:2390230/100‑1 (MQ=255) ggCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCt > 1:2989387/1‑100 (MQ=255) ggCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCt < 1:3832182/100‑1 (MQ=255) ggCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCt > 2:2363753/1‑100 (MQ=255) tGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCa > 2:4194492/1‑100 (MQ=255) aaTCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGCCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAgg < 1:2812591/100‑1 (MQ=255) gcgACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGgcgcg > 2:2084282/1‑100 (MQ=255) gcgACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGgcgcg < 2:4066843/100‑1 (MQ=255) gcgACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGgcgcg > 2:1313015/1‑100 (MQ=255) cgACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGgcgcgn < 2:1140075/100‑2 (MQ=255) cgACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGgcgcgc < 2:1534129/100‑1 (MQ=255) gACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCt > 2:3384096/1‑100 (MQ=255) aCGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTa > 2:2614202/1‑100 (MQ=255) cATAAGAGCTCTGTATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATc < 1:3694540/99‑1 (MQ=255) cATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATcc < 1:782862/100‑1 (MQ=255) cATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATcc > 2:4014356/1‑100 (MQ=255) tAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATcccc < 1:946083/100‑1 (MQ=255) tAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATcccc > 2:3578040/1‑100 (MQ=255) agagCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAg < 2:2697602/100‑1 (MQ=255) gCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCg > 2:1188987/1‑100 (MQ=255) gCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCg > 1:1542571/1‑100 (MQ=255) tctGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGAt < 2:3477369/100‑1 (MQ=255) tGCATGAAAATACTGGTGATCGGCCCGTCGTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGAt < 1:2086417/98‑1 (MQ=255) tGCATGAAAATACTGCTGACCGGCCCGTCTTGGGTTGGCGACAGGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGCCGCGCGCTCCCCCCGCGAtca > 1:4123630/1‑98 (MQ=255) gCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGGAAAGTCTCTATCGCACGCTCCAGGCGCGGTGTCCCCAGGCGATatt > 2:820150/1‑98 (MQ=255) gCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAAt > 1:1006261/1‑100 (MQ=255) gCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGAAATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAAt > 1:2233966/1‑100 (MQ=255) gCATGAAAATACTGGTGATCGGCCCGCCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATaa < 1:2302750/99‑1 (MQ=255) cATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATc > 1:2514105/1‑100 (MQ=255) cATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATc < 2:2995993/100‑1 (MQ=255) cATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATc < 1:820888/100‑1 (MQ=255) tGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGa < 2:2168279/100‑1 (MQ=255) tGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGa > 2:2735120/1‑100 (MQ=255) gAAAATACTGGTTATCGGCCCGTCTTGGGTTGGCGACATGATTATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGAt < 1:712491/100‑1 (MQ=255) aaaaTACTGGTGATCGGCCGGTCTTGGGTTGCCGACATGATGATGTCGGAAAGTCTCGATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGAtg < 1:2009455/100‑1 (MQ=255) aaaaTACTGGTGATCGGCCCGGCTTGGGTTGGCGACATGATGACGTCGCAAAGTCTCTATCGCACGCTCAAGGTGCGCTATCCCCAGGCGCTAATCGAtg < 1:665753/100‑1 (MQ=255) tACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGAt < 1:185107/100‑1 (MQ=255) aCTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGACGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATg < 1:3029145/100‑1 (MQ=255) cTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATgg < 2:2857155/100‑1 (MQ=255) tGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCAcc < 2:3019235/100‑1 (MQ=255) tCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGc > 2:2002632/1‑100 (MQ=255) cGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCa < 2:511510/100‑1 (MQ=255) ggCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCAt > 1:1718149/1‑100 (MQ=255) ggCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCAt > 2:1471893/1‑100 (MQ=255) ggCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCAt > 2:1958147/1‑100 (MQ=255) gCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATg < 2:1952456/100‑1 (MQ=255) gCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATg < 2:2782067/100‑1 (MQ=255) cccGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATgg < 2:579496/100‑1 (MQ=255) cGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTg > 1:922341/1‑100 (MQ=255) cGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTg > 2:1759617/1‑100 (MQ=255) gTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGc > 1:2473765/1‑100 (MQ=255) ttGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGAGATGGCACCGGCATGGTGCCGt < 1:2550757/100‑1 (MQ=255) tGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTc > 1:3163676/1‑100 (MQ=255) ggTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCa < 2:4164926/100‑1 (MQ=255) gTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCat > 2:3911289/1‑100 (MQ=255) ctttgCGACATCATCATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCat > 2:1626332/5‑100 (MQ=255) ctttgCGACATCATCATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCat > 2:1532013/5‑100 (MQ=255) ctttgCGACATCATCATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCat > 2:4346822/5‑100 (MQ=255) cttagCGACATCATCATGGCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATATGAAGACACAGGCAAAGTAACGTCCa > 1:107436/5‑99 (MQ=255) tttgCGACATCATCATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCatt > 1:3404844/4‑100 (MQ=255) ttgCGACATCATCATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCatta > 1:2772031/3‑100 (MQ=255) tGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCTAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCatta > 1:4386062/1‑100 (MQ=255) ggCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCattat < 1:4035241/100‑1 (MQ=255) tgatgatgTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCATTATTATcgcg < 2:83420/100‑1 (MQ=255) gatgatgTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCATTATTATCGCgg > 1:1363087/1‑100 (MQ=255) | TGCTGAAGGTGTAACGGAATACATGGCCTGGCTGAATCGCGACGCATAAGAGCTCTGCATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCATTATTATCGCGG > NC_000913/3794871‑3795069 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |