Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,980,726 G→A 17.1% intergenic (+30/‑161) wecG → / → yifK UDP‑N‑acetyl‑D‑mannosaminuronic acid transferase/putative APC family amino acid transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,980,7260GA17.1% 495.8 / 76.1 209intergenic (+30/‑161)wecG/yifKUDP‑N‑acetyl‑D‑mannosaminuronic acid transferase/putative APC family amino acid transporter
Reads supporting (aligned to +/- strand):  ref base G (78/95);  new base A (15/21);  total (93/116)
Fisher's exact test for biased strand distribution p-value = 8.54e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.20e-01

Only 100 of 216 total aligned reads displayed.

GCCGAGCCGCATTAAGCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAACATTTGCAACAC  >  NC_000913/3980627‑3980824
                                                                                                   |                                                                                                  
gccgagccgCATTAAGCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTgg                                                                                                    <  1:822206/100‑1 (MQ=255)
gccgagccgCATTAAGCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTgg                                                                                                    <  1:1206110/100‑1 (MQ=255)
  cgagccgCATTAAGCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTc                                                                                                  <  2:107203/100‑1 (MQ=255)
       cgCATTAAGCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGACCACTcc                                                                                             <  2:2743410/100‑1 (MQ=255)
          aTTAAGCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTc                                                                                          <  2:3289099/100‑1 (MQ=255)
          aTTAAGCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGACCACTCCGTc                                                                                          <  1:244270/100‑1 (MQ=255)
           ttAAGCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGACCACTCCGTCg                                                                                         <  2:1475146/100‑1 (MQ=255)
            tAAGCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGACCACTCCGTCGc                                                                                        <  2:3577460/100‑1 (MQ=255)
            tAAGCGTCAGCTTCGGTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGACCACTCCGTCGc                                                                                        <  1:3485188/100‑1 (MQ=255)
             aaGCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGACCACTCCGTCGct                                                                                       <  1:3050235/100‑2 (MQ=255)
             aaGCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGACCACTCCGTCGct                                                                                       <  1:3007565/100‑2 (MQ=255)
             aaGCGTCAGCTTCGTATGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGcc                                                                                       <  2:4329143/100‑1 (MQ=255)
               gCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGACCACTCCGTCGcttt                                                                                     <  2:3164249/100‑4 (MQ=39)
                cGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACAACGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGt                                                                                    >  1:1818871/1‑100 (MQ=255)
                  tCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCt                                                                                  <  2:3486053/100‑1 (MQ=255)
                  tCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCt                                                                                  <  2:1175282/100‑1 (MQ=255)
                   cAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTg                                                                                 <  1:8374/100‑1 (MQ=255)
                    aGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTATGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGc                                                                                >  2:1758230/1‑100 (MQ=255)
                     gCTTCGTTTGCTGCGTTTTTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGACCACTCCGtn                                                                                          <  1:4033906/89‑2 (MQ=255)
                     gCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCt                                                                               >  1:2602416/1‑100 (MQ=255)
                     gCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGACCACTCCGTCGctttacaaag                                                                               <  2:1266025/100‑10 (MQ=37)
                      cTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCtt                                                                              >  2:82828/1‑100 (MQ=255)
                      cTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCtt                                                                              >  1:1857075/1‑100 (MQ=255)
                      cTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCtt                                                                              >  1:3640648/1‑100 (MQ=255)
                       ttCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCttt                                                                             >  1:2063322/1‑100 (MQ=255)
                       ttCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCttt                                                                             <  2:4134001/100‑1 (MQ=255)
                         cGTTTGCTGCGTTATTTACGCTGGCACTACACTGTCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCttttt                                                                           <  1:2856629/100‑1 (MQ=255)
                            ttGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTttat                                                                        <  1:1000812/100‑1 (MQ=255)
                             tgatgcGTTATTTACGCTGGTGCGACACCGGCAAGCTATGATTTTTCTCGCGTTGTACAGCGTCGGAGTTGTCACAACGTAGCCTGTCTGCTTTTttat                                                                        <  1:1327004/96‑1 (MQ=255)
                              ttccgatcttttACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTttatta                                                                      <  2:3412676/91‑1 (MQ=255)
                              gctgcGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTttatta                                                                      >  2:1193271/1‑100 (MQ=255)
                               ctgcGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTac                                                                     <  2:4026437/100‑1 (MQ=255)
                               ctgcGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTac                                                                     <  1:1095265/100‑1 (MQ=255)
                                tgcGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTaca                                                                    <  2:674041/100‑1 (MQ=255)
                                 gcGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTacac                                                                   <  1:2257960/100‑1 (MQ=255)
                                 gcGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTacac                                                                   <  1:167732/100‑1 (MQ=255)
                                 cgatcttttACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTacac                                                                   <  1:728619/94‑1 (MQ=255)
                                    ttATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACaaa                                                                <  1:2835219/100‑1 (MQ=255)
                                     tATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAg                                                               >  2:2069511/1‑100 (MQ=255)
                                     tATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAg                                                               >  2:2025814/1‑100 (MQ=255)
                                     tATTTACGCTGGCACTACACCGGAAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGCGGATACTCCGTCGCCCGTCTGCTTTTTTATTACACAAAg                                                               >  1:1153786/1‑100 (MQ=255)
                                       tttACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTttattaagatcggaa                                                             >  1:3412658/1‑91 (MQ=255)
                                       tttACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTAcacagatcg                                                             >  2:728621/1‑95 (MQ=255)
                                       tttACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCa                                                             <  1:305704/100‑1 (MQ=255)
                                            gCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCaa                                                        >  1:1802472/1‑100 (MQ=255)
                                            gCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCaa                                                        >  2:2480438/1‑100 (MQ=255)
                                            gCTGGCACTACACCCGCAACCTATGCTTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACGCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCa                                                         <  1:1865011/99‑1 (MQ=255)
                                                  aCTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAAttttt                                                  <  1:1161859/100‑1 (MQ=255)
                                                  aCTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAAttttt                                                  >  2:2226927/1‑100 (MQ=255)
                                                     acacCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAAt                                               <  1:1024268/100‑1 (MQ=255)
                                                      cacCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATg                                              >  1:481534/1‑100 (MQ=255)
                                                       acCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGc                                             <  2:503343/100‑1 (MQ=255)
                                                        ccGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCt                                            >  1:4082868/1‑100 (MQ=255)
                                                        ccGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCt                                            >  2:1581961/1‑100 (MQ=255)
                                                         cGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCtt                                           <  1:1531699/100‑1 (MQ=255)
                                                          ggCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCttt                                          <  1:109294/100‑1 (MQ=255)
                                                          ggCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCttt                                          >  2:263062/1‑100 (MQ=255)
                                                              aCCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTAttt                                      <  2:2382417/100‑1 (MQ=255)
                                                                cTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTg                                     >  1:3845958/1‑99 (MQ=255)
                                                                 tATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGcc                                   >  1:2171888/1‑100 (MQ=255)
                                                                  atgatgTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTTCGTCGCCTGTCACCTTCTTTATTGTGTAAATCGTTCAATTGCTTGATGCCTTAttttgca                                  >  1:3937636/1‑96 (MQ=255)
                                                                  aTGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCa                                  <  2:4148409/100‑1 (MQ=255)
                                                                    gATTTTCCTCTCTTTTTAAAGCGACTGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCAtt                                <  1:1991037/100‑1 (MQ=255)
                                                                      ttttCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAACGCATTCAAATTTTTAATGCTTTATTTGCCATTtc                              >  1:2086255/1‑100 (MQ=255)
                                                                      ttttCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTtc                              <  2:2257603/100‑1 (MQ=255)
                                                                         tCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTcc                           <  2:3900514/100‑1 (MQ=255)
                                                                         tCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTcc                           >  2:3278742/1‑100 (MQ=255)
                                                                           ctctctTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTg                         <  2:2761627/100‑1 (MQ=255)
                                                                           ctctctTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTg                         <  1:3253224/100‑1 (MQ=255)
                                                                              tctTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAAt                      <  2:624377/100‑1 (MQ=255)
                                                                               ctTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAAtt                     <  1:2682494/100‑1 (MQ=255)
                                                                               ctTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATATCTCCTAAAtt                     >  1:4056945/1‑100 (MQ=255)
                                                                                tttGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTa                    <  2:3504795/100‑1 (MQ=255)
                                                                                 ttGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTAc                   >  1:4324500/1‑100 (MQ=255)
                                                                                  agacaggCGACGGAGTGACCACTCCGTCGCTTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACg                  >  2:136726/7‑100 (MQ=37)
                                                                                   gTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGa                 <  1:1601247/100‑1 (MQ=255)
                                                                                    tAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGaa                <  2:2637556/100‑1 (MQ=255)
                                                                                     aaaGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGaaa               <  1:4022701/100‑1 (MQ=255)
                                                                                     aaaGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGaaa               <  2:3764003/100‑1 (MQ=255)
                                                                                      aaGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGaaaa              >  2:894139/1‑100 (MQ=255)
                                                                                      aaGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGaaaa              >  2:4396939/1‑100 (MQ=255)
                                                                                      aaGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGaaaa              >  2:21180/1‑100 (MQ=255)
                                                                                       ggCGACGGAGTGACCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAAc             >  2:2894688/2‑100 (MQ=255)
                                                                                       aGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAAc             <  2:4174806/100‑1 (MQ=255)
                                                                                        gCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAACa            >  2:388368/1‑100 (MQ=255)
                                                                                        gCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAACa            <  1:1662163/100‑1 (MQ=255)
                                                                                        gCGACGGAGTGACCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAACa            >  2:837948/1‑100 (MQ=255)
                                                                                        gCGACGGAGTGACCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAACATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAACa            >  2:1708481/1‑100 (MQ=255)
                                                                                         cGACGGAGTGACCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAACAt           >  2:3218096/1‑100 (MQ=255)
                                                                                          gACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTTCACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTTCTGCATTACGaaa               <  1:141863/95‑1 (MQ=255)
                                                                                          gACGGAGTGACCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAACAtt          >  2:1500982/1‑100 (MQ=255)
                                                                                           aCGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGTCATTTCTCCTGAATTACGAAAACAttt         >  2:2418680/1‑100 (MQ=255)
                                                                                             ggAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACACAGCATTCAAATTTTTACTGCTTTATTTGCCATTTCTCCTGCATTACGAAAACAttttc       >  1:1692011/1‑98 (MQ=255)
                                                                                             ggAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAACATTTGc       <  2:3845983/100‑1 (MQ=255)
                                                                                             ggAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAACATTTGc       <  2:2848310/100‑1 (MQ=255)
                                                                                               aggggTCACACCGTCGCCTGTTTGCTTTTTTATTACACAAAGTATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAACATTTGCa      <  1:3824804/96‑1 (MQ=255)
                                                                                                gTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAACATTTGCAac    <  2:2652528/100‑1 (MQ=255)
                                                                                                gTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAACATTTGCAac    <  1:3795077/100‑1 (MQ=255)
                                                                                                  ggTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTACTGCTTTATTTGCCATTTCTCCTGAATTACGAAAACATTTGCAacac  <  1:2435653/100‑1 (MQ=255)
                                                                                                   gTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGACATTTCTCCTGAATTACGAAAACATTTGCAacac  >  1:656091/1‑99 (MQ=255)
                                                                                                   |                                                                                                  
GCCGAGCCGCATTAAGCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGATTTTCCTCTCTTTGTAAAGCGACGGAGTGGTCACTCCGTCGCCTGTCTGCTTTTTTATTACACAAAGCATTCAAATTTTTAATGCTTTATTTGCCATTTCTCCTGAATTACGAAAACATTTGCAACAC  >  NC_000913/3980627‑3980824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: