| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,036,094 | A→G | 16.8% | I109V (ATC→GTC) | hyaD → | hydrogenase 1 maturation protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,036,094 | 0 | A | G | 16.8% | 368.8 / 65.7 | 168 | I109V (ATC→GTC) | hyaD | hydrogenase 1 maturation protease |
| Reads supporting (aligned to +/- strand): ref base A (77/61); new base G (10/18); total (87/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.29e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.10e-01 | |||||||||||
Only 100 of 174 total aligned reads displayed.
CTGCGAACCTATGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAAC > NC_000913/1035995‑1036193 | cTGCGAACCTATGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGata < 1:1040488/100‑1 (MQ=255) cGAACCTATGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATcc > 2:2643145/1‑100 (MQ=255) ccTATGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCcgcgn < 2:1098745/100‑2 (MQ=255) ccTATGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCgg > 1:612524/1‑100 (MQ=255) cTATGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGa < 1:757712/100‑1 (MQ=255) tATGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGAc > 2:636956/1‑100 (MQ=255) tATGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGAc < 1:1418187/100‑1 (MQ=255) tGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACAt > 1:1013736/1‑100 (MQ=255) tGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGGGTTGGCGCGCGCGGATATCCGCGGAc > 1:2696818/1‑98 (MQ=255) gCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATc > 1:3411975/1‑100 (MQ=255) ccGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCt > 2:3305874/1‑100 (MQ=255) cGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTg < 2:2549884/100‑1 (MQ=255) ttcgaCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGcc < 2:3309692/96‑1 (MQ=38) gaACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGGTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAg < 1:1574920/100‑1 (MQ=255) aaCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGc < 2:3269500/100‑1 (MQ=255) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGca > 2:3370141/1‑100 (MQ=255) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcg < 2:4294943/100‑2 (MQ=38) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcg < 2:1828099/100‑2 (MQ=38) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcg < 2:2768268/100‑2 (MQ=38) cGCATTCCGGCTTATCTCAGCGCGACGAAAATGAGCCTGCATCATAACAGTGTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGc < 1:536499/98‑1 (MQ=37) cGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGcac < 2:3549550/100‑1 (MQ=255) cGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGcac > 2:2195191/1‑100 (MQ=255) cGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcg < 1:1450707/99‑2 (MQ=38) cATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcgcca < 2:2940768/100‑5 (MQ=37) cATTCCGGCGTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACat > 1:3223630/1‑100 (MQ=255) aTTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACata > 1:3944249/1‑100 (MQ=255) aTTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACat > 1:3355602/1‑99 (MQ=255) ttCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcgccaac < 1:379437/100‑7 (MQ=37) tCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATAtt > 2:2469552/1‑100 (MQ=255) cGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAACTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGc < 1:2443314/100‑1 (MQ=255) ggCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGcc < 2:3262607/100‑1 (MQ=255) gCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGccc < 1:2798479/100‑1 (MQ=255) tATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcg < 2:3341916/100‑1 (MQ=255) aTCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgt < 2:1138688/100‑1 (MQ=255) tctcAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgtc < 2:3835184/100‑1 (MQ=255) tctcAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgtc > 1:3979417/1‑100 (MQ=255) ctcAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgtcg > 1:2224347/1‑100 (MQ=255) ctcAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgtcg > 1:2291464/1‑100 (MQ=255) ctcAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgtcg > 2:3667261/1‑100 (MQ=255) cAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGt > 2:626672/1‑100 (MQ=255) cAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGt > 2:745226/1‑100 (MQ=255) aGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTc < 1:3022896/100‑1 (MQ=255) aGCGCGAAGAAAATGAGCCTGCATCACAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTc > 2:2680862/1‑100 (MQ=255) cgcgAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTg < 2:1219066/100‑1 (MQ=255) cgcgAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTg < 1:149834/100‑1 (MQ=255) gcgAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGc > 1:951366/1‑100 (MQ=255) gcgAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGc > 1:189521/1‑100 (MQ=255) aagaaAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAAc > 2:4283632/1‑100 (MQ=255) gaaAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAAccc < 2:1636157/100‑1 (MQ=255) gaaAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAAccc < 1:3574130/100‑1 (MQ=255) aaaTGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGc < 2:668922/100‑1 (MQ=255) aaaTGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGc < 2:2317882/100‑1 (MQ=255) aaTGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCa > 1:529362/1‑100 (MQ=255) cTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTcg < 1:2594342/100‑1 (MQ=255) cTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTcg < 1:3549324/100‑1 (MQ=255) tGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTcga < 2:854823/100‑1 (MQ=255) tGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTcga > 2:1939520/1‑100 (MQ=255) gCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTcgac < 2:3685682/100‑1 (MQ=255) tCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCgacgac > 2:1905570/1‑100 (MQ=255) gAACCGTTTCCGCGAAGTGTTCGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATCGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACtcc < 1:2806703/100‑3 (MQ=255) aaCAGTCGCTCCGAAGCGTGGGCGCTGGCCGATCTCGGCGGACTGCCGCCAGATCATATTGCCCTCGTCGGACTGGAGCTCGCAATGCTcgtacagta < 1:3403340/98‑8 (MQ=255) aCAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTAcgg < 1:4270883/100‑1 (MQ=255) cAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTAcggc < 1:2390000/100‑1 (MQ=255) gTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTAcggcgg < 1:2569190/100‑1 (MQ=255) ttCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTa > 1:1495812/1‑100 (MQ=255) ctcCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGc > 2:504338/1‑100 (MQ=255) ctcCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGc > 1:2942150/1‑100 (MQ=255) ctcCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGACTGCAACCCGCAATGCTCGACGACTAcggcgg > 1:3688833/1‑96 (MQ=255) ccGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCt > 2:4071112/1‑100 (MQ=255) cGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTg < 2:1005090/100‑1 (MQ=255) cGAAGTGGTGGCGCTGACGAATATCAAAAGACAACTGCCAGCACATATTGACCTCGTAGATCTGCGACCAGCAAAGCCCGACGACTCCGGCGGTAGACt > 1:2313280/1‑99 (MQ=255) gcaatatgtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGc > 2:2526760/10‑100 (MQ=21) gcaatatgtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGc > 2:828845/10‑100 (MQ=21) aGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGc < 1:3496763/100‑1 (MQ=255) aGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGc < 2:1497116/100‑1 (MQ=255) gtgtTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCg > 2:593814/1‑100 (MQ=255) tgtTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGa > 1:1183300/1‑100 (MQ=255) tgtTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGa < 2:100581/100‑1 (MQ=255) gtTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGaa > 1:2840313/1‑100 (MQ=255) gtTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGaa > 1:3683096/1‑100 (MQ=255) tGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAAc < 1:530350/99‑1 (MQ=255) tGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACt < 2:973511/100‑1 (MQ=255) tgtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTg > 1:585750/4‑100 (MQ=37) ggCGCTGGCGGATCTCCGCGGACACCTGCCAGCACATATCGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTCCGGCGGTAGCCTGAGCGAACTg < 1:1967258/100‑1 (MQ=255) gtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTgg > 2:4138016/3‑100 (MQ=37) gtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTgg > 1:2909057/3‑100 (MQ=37) gtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTgg > 2:831174/3‑100 (MQ=37) gcgcTGGCCGATATACGCGGACATCTGCCAGGACCTAGTGCCATCGTCGGTCTGCAACCCGCAATGATCGACGACTACGGCGGTAGCCTGAGCGAACTgg < 1:1540430/100‑1 (MQ=255) tgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGc > 1:1744388/2‑100 (MQ=38) tgcTGGCAGATGTCCGCGGATATCCGCCAGAACGTATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGGGCGAACTGGc > 1:2891110/2‑100 (MQ=25) cgcTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGc > 2:3028402/1‑100 (MQ=255) gcTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCa < 1:2110672/100‑1 (MQ=255) gcTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCa > 2:2008348/1‑100 (MQ=255) gCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACggg < 2:215556/100‑1 (MQ=255) cGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGa > 1:3463656/1‑100 (MQ=255) cGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGa > 1:3906877/1‑100 (MQ=255) ggATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAg < 1:3480168/100‑1 (MQ=255) ggATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAg > 2:1179209/1‑100 (MQ=255) ggATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAg < 1:116796/100‑1 (MQ=255) atCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAAc < 1:2557552/100‑1 (MQ=255) | CTGCGAACCTATGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAAC > NC_000913/1035995‑1036193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |