| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,036,103 | C→T | 15.2% | H112Y (CAT→TAT) | hyaD → | hydrogenase 1 maturation protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,036,103 | 0 | C | T | 15.2% | 440.5 / 58.3 | 177 | H112Y (CAT→TAT) | hyaD | hydrogenase 1 maturation protease |
| Reads supporting (aligned to +/- strand): ref base C (82/68); new base T (10/17); total (92/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.92e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.34e-01 | |||||||||||
Only 100 of 180 total aligned reads displayed.
TATGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGCCCGCT > NC_000913/1036004‑1036201 | tATGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGAc < 1:1418187/100‑1 (MQ=255) tGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACAt > 1:1013736/1‑100 (MQ=255) tGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGGGTTGGCGCGCGCGGATATCCGCGGAc > 1:2696818/1‑98 (MQ=255) gCCGGAGAACGCATTCCGGCTTATCTCCGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACAt > 1:1146011/1‑99 (MQ=255) gCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATc > 2:3595351/1‑100 (MQ=255) gCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATc < 2:1996461/100‑1 (MQ=255) aaCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGc < 2:3269500/100‑1 (MQ=255) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGca > 2:3370141/1‑100 (MQ=255) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGAGGACATCTGCCAGca > 2:4327368/1‑100 (MQ=255) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGTTGTCCGCGGATATCCGCCAGcg < 1:3376332/100‑2 (MQ=38) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcg < 1:1170664/100‑2 (MQ=38) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcg < 2:4294943/100‑2 (MQ=38) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcg < 2:1828099/100‑2 (MQ=38) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcg < 2:2768268/100‑2 (MQ=38) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcg < 2:562160/100‑2 (MQ=38) cGCATTCCGGCTTATCTCAGCGCGACGAAAATGAGCCTGCATCATAACAGTGTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGc < 1:536499/98‑1 (MQ=37) cGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGcac > 2:2195191/1‑100 (MQ=255) cGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcg < 1:1450707/99‑2 (MQ=38) gCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGcaca > 2:826484/1‑100 (MQ=255) cATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACat > 1:3425753/1‑100 (MQ=255) cATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcgcca < 1:2823199/100‑5 (MQ=37) cATTCCGGCGTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACat > 1:3223630/1‑100 (MQ=255) aTTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACat > 1:3355602/1‑99 (MQ=255) ttCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcgccaac < 1:1555405/100‑7 (MQ=25) ttCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcgccaac < 1:379437/100‑7 (MQ=37) cGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAACTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGc < 1:2443314/100‑1 (MQ=255) cGGCTTATCTCAGCGCGAAGAAAATGAGCCTGAATCAGAACAGTTTCTCCGAAGTGTTTGCGCTGGCGGATATCCGCGGACCTCTGCCAGCACATATTg > 1:2331984/1‑99 (MQ=255) gCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGccc < 1:2798479/100‑1 (MQ=255) gCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGccc < 2:652754/100‑1 (MQ=255) tATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcg < 2:2072716/100‑1 (MQ=255) aTCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgt < 2:1138688/100‑1 (MQ=255) ctcAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgtcg > 2:3667261/1‑100 (MQ=255) ctcAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgtcg > 1:4332685/1‑100 (MQ=255) ctcAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgtcg > 2:2420353/1‑100 (MQ=255) cAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGt > 2:745226/1‑100 (MQ=255) cAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGt > 2:626672/1‑100 (MQ=255) aGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTc < 1:3022896/100‑1 (MQ=255) aGCGCGAAGAAAATGAGCCTGCATCACAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTc > 2:2680862/1‑100 (MQ=255) gcgcGAAGCAAATGAGCCTGCATCCGAACAGTTTCTCCGGAGTGTTGGCGCTGGCGGGTATCCGCGGACAGCTGCCAGCACATGTTGCCCccgtctggct > 1:1576231/1‑95 (MQ=255) cgcgAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTg < 2:1219066/100‑1 (MQ=255) cgcgAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTg < 1:149789/100‑1 (MQ=255) gcgAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGc < 2:4269215/100‑1 (MQ=255) gcgAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGc > 1:189521/1‑100 (MQ=255) gcgAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGc > 1:951366/1‑100 (MQ=255) cgAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCa < 2:1013740/100‑1 (MQ=255) cgAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCa < 2:2567547/100‑1 (MQ=255) aaaTGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGc > 2:3306502/1‑100 (MQ=255) gCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCt < 2:3271561/100‑1 (MQ=255) gCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCt > 1:2853986/1‑100 (MQ=255) cTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTcg < 1:2594342/100‑1 (MQ=255) tGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTcga < 2:854823/100‑1 (MQ=255) tGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTcga > 2:1939520/1‑100 (MQ=255) tGCATCAGAACAGTTTCCCCGACGTGTTGGCGCTGGCGGATATCGGCGGACATCTGCCAGCACACATTCCCCTCGTCGGCCCGCAACCCGCAATGCTc > 1:2284719/1‑98 (MQ=255) gCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTcgac < 2:3685682/100‑1 (MQ=255) tCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCgacgac > 2:1905570/1‑100 (MQ=255) aGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTa > 2:3322476/1‑100 (MQ=255) aactgcttCTCCGCAGTGTGGGAGCTGGGGGATGTCCGCAGGCAGCTGCCAGCGAATATTGCCCGAGTCGGTGTGCAACCCGCAATGCTc < 1:348765/84‑1 (MQ=255) aCAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTAcgg < 1:4270883/100‑1 (MQ=255) gTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTAcggcgg < 1:2042705/100‑1 (MQ=255) ttCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTa > 1:1495812/1‑100 (MQ=255) ctcCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGc > 1:2942150/1‑100 (MQ=255) ctcCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGc > 1:3411123/1‑100 (MQ=255) ctcCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGc > 1:3568192/1‑100 (MQ=255) ctcCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGACTGCAACCCGCAATGCTCGACGACTAcggcgg > 1:3688833/1‑96 (MQ=255) ccGGAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATACTGCCCTCGTCGGTCTGCAACCCGCAATGCTGGACGACTACGGCGGTAGCCt > 1:3968963/1‑100 (MQ=255) ccGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCt > 2:4071112/1‑100 (MQ=255) cGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTg < 2:1005090/100‑1 (MQ=255) cGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCGGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTg > 1:882155/1‑100 (MQ=255) cGAAGTGGTGGCGCTGACGAATATCAAAAGACAACTGCCAGCACATATTGACCTCGTAGATCTGCGACCAGCAAAGCCCGACGACTCCGGCGGTAGACt > 1:2313280/1‑99 (MQ=255) gcaatatgtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGc > 2:2526760/10‑100 (MQ=21) gtgtTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCg > 2:593814/1‑100 (MQ=255) tgtTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCCGTCTGCAACCCGCAACGCTCGACGACTACGGCGGTAGCCTGAGCGa < 1:3508102/100‑1 (MQ=255) gtTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGaa > 1:3683096/1‑100 (MQ=255) ttGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAAc > 1:2127926/1‑100 (MQ=255) tGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAAc < 1:530350/99‑1 (MQ=255) tGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACt < 2:973511/100‑1 (MQ=255) tGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACt > 1:2575869/1‑100 (MQ=255) tgtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTg > 1:585750/4‑100 (MQ=37) gtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTgg > 2:831174/3‑100 (MQ=37) gtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTgg > 2:4138016/3‑100 (MQ=37) tgcTGGCAGATGTCCGCGGATATCCGCCAGAACGTATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGGGCGAACTGGc > 1:2891110/2‑100 (MQ=25) cgcTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGc > 2:1599392/1‑100 (MQ=255) cgcTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGc > 2:3028402/1‑100 (MQ=255) gcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCa > 1:1835026/1‑100 (MQ=38) cTGGCTGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCa < 1:3850158/99‑1 (MQ=255) ggATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAg > 2:1179209/1‑100 (MQ=255) ggATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAg < 1:3480168/100‑1 (MQ=255) atCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAAc < 1:2557552/100‑1 (MQ=255) atCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAAc < 2:2317773/100‑1 (MQ=255) tCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACt > 2:4114149/1‑100 (MQ=255) tCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACt > 2:717556/1‑100 (MQ=255) ccGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCGACCCGCAATGCTCGACGACAACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTg > 1:2390214/1‑100 (MQ=255) ccGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTg > 2:1279215/1‑100 (MQ=255) ccGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTg < 2:1645875/100‑1 (MQ=255) ccGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTg < 1:1536311/100‑1 (MQ=255) cgcgGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGc > 1:3918481/1‑100 (MQ=255) gcgGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGcc < 2:2608485/100‑1 (MQ=255) cgGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGccc < 2:3018060/100‑1 (MQ=255) ggACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGCCCg > 2:3871715/1‑100 (MQ=255) aCATCTGCAAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTggc > 1:4164862/1‑94 (MQ=255) | TATGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGCCCGCT > NC_000913/1036004‑1036201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |