| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,956,978 | Δ1 bp | 15.2% | coding (843/894 nt) | ilvY ← | transcriptional activator of ilvC; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,956,978 | 0 | T | . | 15.2% | 508.5 / 88.3 | 171 | coding (843/894 nt) | ilvY | transcriptional activator of ilvC; autorepressor |
| Reads supporting (aligned to +/- strand): ref base T (73/72); new base . (8/18); total (81/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.76e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 176 total aligned reads displayed.
AAAATGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTT > NC_000913/3956879‑3957077 | aaaaTGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGt > 1:1402510/1‑100 (MQ=255) aaaTGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGATCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCG‑CATGTa > 2:691537/1‑100 (MQ=255) aTGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGc > 1:2805411/1‑100 (MQ=255) cTGATAGCGCTTCGCTTATCAGGCCTACCCGCTCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCt < 2:588814/100‑1 (MQ=255) cTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCt < 2:551523/100‑1 (MQ=255) cTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCt < 1:719637/100‑1 (MQ=255) tGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCtt > 1:1491218/1‑100 (MQ=255) tGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCCGCT‑CATGTAGCCGCtt > 2:2449807/1‑100 (MQ=255) tGATAGCGCTTCGCTTATCACGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCtt < 2:1912060/100‑1 (MQ=255) aTAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaat < 1:1246756/100‑4 (MQ=255) aTAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaat < 1:551254/100‑4 (MQ=255) aTAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCtttt < 2:378218/100‑1 (MQ=255) tAGCTCTTTGCTTATCAGGCCTACCCGCGCGACAAGGTCATTGGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaatt < 2:3387186/100‑5 (MQ=255) gcgcTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaattga < 1:1700217/100‑7 (MQ=255) gcgcTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCt > 1:1277766/1‑100 (MQ=255) gcgcTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCt > 2:3313392/1‑100 (MQ=255) gcgcTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCt > 1:520400/1‑100 (MQ=255) cgcttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTg < 2:2222990/100‑1 (MQ=255) gcttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaattgagg < 1:3269484/100‑9 (MQ=38) gcttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaattgagg < 1:1241314/100‑9 (MQ=38) gcttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaattgagg < 2:2302923/100‑9 (MQ=38) gcttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTgc < 2:2095421/100‑1 (MQ=255) gcttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTgc < 1:1873422/100‑1 (MQ=255) cttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATTCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTgcg > 1:3991140/1‑100 (MQ=255) tcgcttATCATGCCTAAGCGCTCCAAACCGTCATTTGTGGTTCGGCAAAATCTTCCATAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaattgaggc < 2:958850/98‑10 (MQ=16) tcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGca < 1:645078/100‑1 (MQ=255) tcgcttATCAGGCCTACCCGCGCGACAACGCCATTTGTGGTTCGGCAAACTCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGca > 2:1188592/1‑100 (MQ=255) gcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcaca < 1:1863324/100‑1 (MQ=255) gcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcaca < 2:1613349/100‑1 (MQ=255) catATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcacac > 1:2831810/3‑100 (MQ=255) ttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcacaca < 1:1588074/100‑1 (MQ=255) tATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCacacac > 1:3028738/1‑100 (MQ=255) tATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCacacac > 2:1085155/1‑100 (MQ=255) cAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGcc > 2:2973016/1‑100 (MQ=255) cAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGcc > 1:966093/1‑100 (MQ=255) ggCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCa > 2:3951759/1‑100 (MQ=255) ccTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGc < 2:402213/100‑1 (MQ=255) ccTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGc > 2:630198/1‑100 (MQ=255) cTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCt < 2:3787123/100‑1 (MQ=255) tACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGc < 2:2542496/98‑1 (MQ=255) aCCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCa > 2:2292715/1‑100 (MQ=255) cccGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCaa > 1:3914548/1‑100 (MQ=255) cccGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCa > 2:3669643/1‑99 (MQ=255) ccGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCaaa > 1:3031880/1‑100 (MQ=255) ccGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTACAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACAAACGCCCAGCTCaaa > 2:1040801/1‑100 (MQ=255) cgcgcgACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAAc > 1:1934558/1‑100 (MQ=255) cgcgcgACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAAc < 2:3877155/100‑1 (MQ=255) gcgACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGc < 1:224063/100‑1 (MQ=255) cgACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCg < 1:1086338/100‑1 (MQ=255) cgACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCg < 1:3159100/100‑1 (MQ=255) cAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGttt < 1:797526/100‑1 (MQ=255) cAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGttt > 1:3395970/1‑100 (MQ=255) cAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGttt < 1:3775935/100‑1 (MQ=255) aaCGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGtttt > 2:421131/1‑100 (MQ=255) tcGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTtc < 2:4042907/99‑1 (MQ=255) cGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTtct > 1:2361206/1‑100 (MQ=255) gTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTtctc < 1:2431550/100‑1 (MQ=255) tCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCa > 1:2372477/1‑100 (MQ=255) aTTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATc < 1:1318360/100‑1 (MQ=255) tttGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCg < 1:3671031/100‑1 (MQ=255) ttGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGc < 2:2590676/100‑1 (MQ=255) gtgGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTg < 1:3091720/100‑1 (MQ=255) tgGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTgc > 2:531025/1‑100 (MQ=255) ggCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTa > 1:2477920/1‑100 (MQ=255) gCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTaa > 2:110857/1‑100 (MQ=255) gCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTATCTCATCGCTGCGCTCTaa > 1:892376/1‑100 (MQ=255) cAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCATACGGCGTTTTCTCATCGCTGCGCTCTaaa > 2:2524379/1‑100 (MQ=255) tCTTCCAGAATGCCTCCATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACGCGCCCAGCTCAAACGGCGTTTTCTGATCGCTGCGCTCTACAatca < 2:1553537/99‑1 (MQ=255) tCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAatcat < 1:3313407/100‑1 (MQ=255) ccgAATGTCTCAATTACCGGCT‑CATGTAGCCGCTTTTTCTCCGCACACACGCCCAGCTCAAACCGCGTTTTCTCATCGCTGCGCTCTAAAATAATCAggc > 2:3152178/3‑100 (MQ=255) aGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACGCGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAAGCAGCAcgcg < 2:820981/100‑1 (MQ=255) aTGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGtt > 2:3098063/1‑100 (MQ=255) gcgcagaaaaaGCGGCTACATG‑AGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTa > 2:1736021/11‑100 (MQ=37) ccTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTatg < 2:235849/100‑3 (MQ=255) ccTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACg < 2:2477914/100‑1 (MQ=255) ccTCAATTAGCGGCC‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCCGCTCAACCGGCGCTTTCTCATCCCTGCGCTCTAAAATCATCACGCGGTTCCg > 1:116529/1‑100 (MQ=255) cTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACGCGCCCAGCTCAAACGGCGTCTTCTCACCGCTGCGCTCTAAAATCATCACGCGGTTACGc < 2:281237/100‑1 (MQ=255) cTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGc < 1:2014323/100‑1 (MQ=255) cTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGc > 1:110806/1‑100 (MQ=255) cTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGc < 1:456509/100‑1 (MQ=255) gaaaaaGCGGCTACATG‑AGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCAc > 1:1089156/6‑100 (MQ=255) aaTTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCAcc < 2:2802031/100‑1 (MQ=255) aaTTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCAcc < 1:2922717/100‑1 (MQ=255) aaTTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCAcc < 2:1441582/100‑1 (MQ=255) aaaaGCGGCTACATG‑AGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCg > 2:779704/4‑100 (MQ=255) cGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCg < 2:858419/100‑1 (MQ=255) ggCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCgg > 1:233250/1‑100 (MQ=255) ggCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCgg < 1:2555/100‑1 (MQ=255) gCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCggg > 1:4182595/1‑100 (MQ=255) gCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCggg < 1:674371/100‑1 (MQ=255) nt‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCgggg > 1:229834/2‑100 (MQ=255) cT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCgggg < 2:3603804/100‑1 (MQ=255) t‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGc < 2:527278/100‑1 (MQ=255) aTGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTg < 1:2712241/100‑1 (MQ=255) tGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTg > 1:4044889/1‑99 (MQ=255) tGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGt > 1:3855204/1‑100 (MQ=255) tGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGt > 1:2207388/1‑100 (MQ=255) tGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGt < 2:1432885/100‑1 (MQ=255) gTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGtt < 1:3974196/100‑1 (MQ=255) tAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGttt > 1:3749114/1‑100 (MQ=255) | AAAATGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTT > NC_000913/3956879‑3957077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |