Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,714,163:1 +T 17.3% coding (2232/2334 nt) bisC ← biotin sulfoxide reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,714,1631.T17.3% 684.2 / 174.8 231coding (2232/2334 nt)bisCbiotin sulfoxide reductase
Reads supporting (aligned to +/- strand):  ref base . (97/94);  new base T (20/20);  total (117/114)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.93e-01

Only 100 of 247 total aligned reads displayed.

TGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATG  >  NC_000913/3714064‑3714262
                                                                                                    |                                                                                                   
 gAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGcc                                                                                                    <  2:4067288/100‑1 (MQ=255)
  aGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCcg                                                                                                   >  2:127076/1‑100 (MQ=255)
  aGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCcg                                                                                                   >  1:615437/1‑100 (MQ=255)
  aGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTAACCGCACGGCCATTCCCCAGCcg                                                                                                   <  2:2254409/100‑1 (MQ=255)
   gCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCcgc                                                                                                  >  2:4111631/1‑100 (MQ=255)
    cTGGCCGGTGGTTCAAACGCCGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCcgcg                                                                                                 >  2:2566633/1‑100 (MQ=255)
      ggCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAg                                                                                               >  1:3271893/1‑100 (MQ=255)
       gCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGc                                                                                              <  2:1455175/100‑1 (MQ=255)
          ggtggtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTgg                                                                                           <  1:2916166/100‑1 (MQ=255)
            tggtTCAAACGCTGTAATTGTCATTTCCTTACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTgggg                                                                                         <  1:1895986/100‑1 (MQ=255)
            tggtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGCGCTgggg                                                                                         >  2:2631937/1‑100 (MQ=255)
            tggtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTgggg                                                                                         <  2:3150950/100‑1 (MQ=255)
             ggtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGga                                                                                        <  2:2203371/100‑1 (MQ=255)
              gtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGgag                                                                                       <  1:1146008/100‑1 (MQ=255)
              gtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGgag                                                                                       >  1:3444832/1‑100 (MQ=255)
               ttCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCCTTCCCCAGCCGCGAGCTGGGgaga                                                                                      >  2:1551861/1‑100 (MQ=255)
               ttCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGgaga                                                                                      <  2:2007541/100‑1 (MQ=255)
               ttCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGgaga                                                                                      <  2:30871/100‑1 (MQ=255)
               ttCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGcaga                                                                                      >  2:1165504/1‑100 (MQ=255)
                tCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCGGCTGGGgaatg                                                                                     <  1:1704268/100‑4 (MQ=255)
                tCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCGGCTGGGgaatg                                                                                     <  2:2858929/100‑4 (MQ=255)
                tCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCGGCTGGGgaatg                                                                                     <  1:144662/100‑4 (MQ=255)
                tCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCGGCTGGGgaatg                                                                                     <  2:495862/100‑4 (MQ=255)
                  aaaCGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCCGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGGTCt                                                                                   >  1:2495778/1‑100 (MQ=255)
                  aaaCGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCTCGCGGCTGGGgaatggc                                                                                   <  1:2389476/100‑6 (MQ=38)
                  aaaCGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCt                                                                                   >  1:3477555/1‑100 (MQ=255)
                  aaaCGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCt                                                                                   <  1:1055684/100‑1 (MQ=255)
                  aaaCGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCAGGCCAGCGCTGTATTACCCGCACAGCCATTCCCCAGCTCGCGGCTGGGgaatg                                                                                     <  2:780241/98‑4 (MQ=255)
                   aaCGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGCGATCtt                                                                                  >  2:1932380/1‑100 (MQ=255)
                         gTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCa                                                                            <  1:1010988/100‑1 (MQ=255)
                            aGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCa                                                                         <  1:4085122/100‑1 (MQ=255)
                             gtgtCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCAc                                                                        <  2:1426710/100‑1 (MQ=255)
                             gtgtCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCAc                                                                        <  2:2135281/100‑1 (MQ=255)
                                 cAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGCGCTGGGGAGATCTTTGGTCAGCACGTTc                                                                    >  2:3926923/1‑100 (MQ=255)
                                 cAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTc                                                                    >  2:3369869/1‑100 (MQ=255)
                                 cAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTc                                                                    >  1:433377/1‑100 (MQ=255)
                                  aGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCCCAGCCCTTCCCCAGCCGCGAGCTGGGGAGCTCTTTGGTCAGCACGt                                                                      >  2:3907022/1‑97 (MQ=255)
                                  aGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCa                                                                   >  2:3175065/1‑100 (MQ=255)
                                       cGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTgcg                                                              >  1:1929776/1‑100 (MQ=255)
                                         gACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGcc                                                            <  1:3101467/100‑1 (MQ=255)
                                          aCCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCg                                                           <  1:2434084/100‑1 (MQ=255)
                                             gTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGTCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGttt                                                        >  2:2892931/1‑100 (MQ=255)
                                             gTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGttt                                                        >  1:113280/1‑100 (MQ=255)
                                              ttGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGtttt                                                       <  1:3518688/100‑1 (MQ=255)
                                               tGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGttttt                                                      >  1:2666451/1‑100 (MQ=255)
                                                 tATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTAc                                                    <  2:347452/100‑1 (MQ=255)
                                                  aTTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTAc                                                    <  1:3899224/99‑1 (MQ=255)
                                                  aTTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACa                                                   <  2:545341/100‑1 (MQ=255)
                                                  aTTTTTCCAGCCATGCAAGCGCCGTATTACCCGCAAAGCCATTCCACAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTAACTGCGCCGTTTTTAc                                                    >  1:2089468/1‑99 (MQ=255)
                                                    ttttCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCATTTTTACaaa                                                 >  1:3797486/1‑100 (MQ=255)
                                                     tttCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAAt                                                >  1:2405716/1‑100 (MQ=255)
                                                       tcaaGCCATGCGAGCGCCGTAGTACCCGCACATCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACa                                                   <  2:3986329/92‑1 (MQ=255)
                                                        ccAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTCTGGTCTGCACGTTCACTGCGCCGTTTTTACAAATAcc                                             >  2:2821418/1‑100 (MQ=255)
                                                         cAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCg                                            >  1:2796399/1‑100 (MQ=255)
                                                           gCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTCTTACAAATACCGTc                                          >  1:3069404/1‑100 (MQ=255)
                                                             cATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAg                                        <  2:3418353/100‑1 (MQ=255)
                                                              aTGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGc                                       >  1:395037/1‑100 (MQ=255)
                                                              aTGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGc                                       >  1:1531636/1‑100 (MQ=255)
                                                               tGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCg                                      <  1:319563/100‑1 (MQ=255)
                                                                 ccAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGt                                    >  1:582408/1‑100 (MQ=255)
                                                                  cAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGtt                                   <  2:1659969/100‑1 (MQ=255)
                                                                  cAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGtt                                   >  1:2518614/1‑100 (MQ=255)
                                                                  cAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGtt                                   >  1:1669554/1‑100 (MQ=255)
                                                                   aGCGCCGTATTACCCGCACAGCCATTCCCCAGTCGCGAGGTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTa                                  <  2:2939374/100‑1 (MQ=255)
                                                                       ccGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATc                              <  1:362938/100‑1 (MQ=255)
                                                                       ccGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATc                              >  2:2978931/1‑100 (MQ=255)
                                                                        cGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATcc                             <  1:3758330/100‑1 (MQ=255)
                                                                           aTTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGa                          <  1:758691/100‑1 (MQ=255)
                                                                           aTTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGa                          <  2:1803170/100‑1 (MQ=255)
                                                                            ttACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGAt                         <  1:4158060/100‑1 (MQ=255)
                                                                             tACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTTGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATc                        <  2:1037078/100‑1 (MQ=255)
                                                                             tACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATc                        >  2:1349617/1‑100 (MQ=255)
                                                                              aCCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATcc                       >  1:2197745/1‑100 (MQ=255)
                                                                               cccGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATGTTTGGTCAGGACGGTCACTGCGCGGTGTTTACAAATACAGTAAGCGGGTAAAGCCa                            >  2:3790371/1‑94 (MQ=255)
                                                                               cccGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCg                      <  1:922283/100‑1 (MQ=255)
                                                                               cccGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGCTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCg                      <  1:2953258/100‑1 (MQ=255)
                                                                                ccGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTCAATCCAGATccag                     <  1:2840052/100‑3 (MQ=255)
                                                                                 cGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGc                    >  2:2296153/1‑100 (MQ=255)
                                                                                 cGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGc                    >  1:2701664/1‑100 (MQ=255)
                                                                                   cacaGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCaagatcggaag                  >  2:3594655/1‑90 (MQ=255)
                                                                                   cacaGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCa                  <  2:3570661/100‑1 (MQ=255)
                                                                                       gCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGcc              >  1:1963222/1‑100 (MQ=255)
                                                                                       gCCATGCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGcc              <  2:2399526/100‑1 (MQ=255)
                                                                                        gatctCCCCAGCTCGCGGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGccc             >  2:93770/5‑100 (MQ=255)
                                                                                           ctCCCCAGCTCGCGGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCtt          >  2:2482443/2‑100 (MQ=255)
                                                                                           ctCCCCAGCTCGCGGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCtt          >  1:986629/2‑100 (MQ=255)
                                                                                           ctCCCCAGCTCGCGGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCtt          >  1:1257856/2‑100 (MQ=255)
                                                                                            tCCCCAGCTCGCGGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTc         >  2:3260518/1‑100 (MQ=255)
                                                                                            tCCCCAGCTCGCGGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTc         >  1:3335079/1‑100 (MQ=255)
                                                                                            tCCCCAGCTCGCGGCTGGGGAGATCTTTGGTCAACACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCGATGCCCCTTc         >  2:2762725/1‑100 (MQ=255)
                                                                                             ccccAGCTCGCGGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCg        >  1:3921861/1‑100 (MQ=255)
                                                                                             ccccAGCTCGCGGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCg        >  1:3786807/1‑100 (MQ=255)
                                                                                             ccccAGCTCGCGGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCg        >  1:3677063/1‑100 (MQ=255)
                                                                                             ccccAGCTCGCGGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCg        >  1:2622251/1‑100 (MQ=255)
                                                                                             ccccAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCg        <  1:3578018/100‑1 (MQ=255)
                                                                                              cccAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGt       <  1:2296158/100‑1 (MQ=255)
                                                                                               ccAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGt       >  1:862377/1‑99 (MQ=255)
                                                                                               ccAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTg      >  2:1120252/1‑100 (MQ=255)
                                                                                                cAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGa     >  2:4013976/1‑100 (MQ=255)
                                                                                                   ccGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATg  >  2:306389/1‑100 (MQ=255)
                                                                                                    |                                                                                                   
TGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCACAGCCATTCCCCAGCCGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATG  >  NC_000913/3714064‑3714262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: