| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,956,973:1 | +A | 15.4% | coding (848/894 nt) | ilvY ← | transcriptional activator of ilvC; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,956,973 | 1 | . | A | 15.4% | 543.5 / 110.4 | 169 | coding (848/894 nt) | ilvY | transcriptional activator of ilvC; autorepressor |
| Reads supporting (aligned to +/- strand): ref base . (73/70); new base A (8/18); total (81/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.64e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.60e-01 | |||||||||||
Only 100 of 178 total aligned reads displayed.
AGGGAAAAATGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGC > NC_000913/3956874‑3957072 | gggAAAAATGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑c > 1:2069955/1‑100 (MQ=255) gggAAAAATGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑c > 2:1204250/1‑100 (MQ=255) gggAAAAATGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGGTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCt > 1:3681560/1‑99 (MQ=255) ggAAAAATGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑Ca > 1:1889445/1‑100 (MQ=255) gAAAAATGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CAt > 1:2917887/1‑100 (MQ=255) aaaaaTGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATg < 2:2173036/100‑1 (MQ=255) aaaaTGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGt > 1:1402510/1‑100 (MQ=255) aaaTGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGATCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCG‑CATGTa > 2:691537/1‑100 (MQ=255) aTGGCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAg < 2:1554378/99‑1 (MQ=255) ccTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGc > 2:1460604/1‑100 (MQ=255) cTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCt < 1:1814714/100‑1 (MQ=255) tGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGcca < 1:2819683/100‑3 (MQ=255) tGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCtt > 1:302123/1‑100 (MQ=255) tGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCCGCT‑CATGTAGCCGCtt > 2:2449807/1‑100 (MQ=255) aTAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaat < 1:1246756/100‑4 (MQ=255) aTAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCt < 2:210233/97‑1 (MQ=255) aTAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCtttt < 2:378218/100‑1 (MQ=255) aTAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCtttt > 1:232104/1‑100 (MQ=255) aTAGCGCTGCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaan < 2:2538777/100‑4 (MQ=255) gcgcTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCt > 2:3313392/1‑100 (MQ=255) gcgcTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCt > 1:1277766/1‑100 (MQ=255) cgcttcgcttATCAGGCCTACCCGCTCGACATCGTCATTTGTGGTTCGGCAAAAGCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaattgag < 2:1970096/100‑8 (MQ=37) cgcttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATAAGCGGCTACATG‑AGCCGCtaattgag < 2:640360/100‑8 (MQ=37) gcttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaattgagg < 1:1241314/100‑9 (MQ=38) gcttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaattgagg < 1:3269484/100‑9 (MQ=38) gcttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTgc < 1:1873422/100‑1 (MQ=255) gcttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTgc < 2:528108/100‑1 (MQ=255) cttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATTCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTgcg > 1:3991140/1‑100 (MQ=255) ttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTgcgc < 1:530621/100‑1 (MQ=255) tcgcttATCATGCCTAAGCGCTCCAAACCGTCATTTGTGGTTCGGCAAAATCTTCCATAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaattgaggc < 2:958850/98‑10 (MQ=16) tcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGca > 2:3024900/1‑100 (MQ=255) tcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGca < 1:645078/100‑1 (MQ=255) cgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcac > 1:965917/1‑100 (MQ=255) cgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcac < 2:2333376/100‑1 (MQ=255) cgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcac > 2:603841/1‑100 (MQ=255) gcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcaca > 1:3688071/1‑100 (MQ=255) gcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcaca < 2:1613349/100‑1 (MQ=255) gcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcaca > 1:2685689/1‑100 (MQ=255) ttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcacaca < 1:1588074/100‑1 (MQ=255) tATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCacacac > 2:57719/1‑100 (MQ=255) tATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCacacac > 2:1085155/1‑100 (MQ=255) tCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGc > 1:2473974/1‑100 (MQ=255) tCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCACAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGc > 2:3958895/1‑100 (MQ=255) cAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGcc > 1:966093/1‑100 (MQ=255) ggCCTACCCGCGCGACAACGTCATTTGTGCTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGccc < 2:3137973/99‑1 (MQ=255) ccTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGc < 2:402213/100‑1 (MQ=255) actcgcgcgACAACGTCATTTGGGGTTCGGCGAAATATTGCCGAATGACTCAGTTAGCGGCT‑CATGTAGCCGCTTTGTCTGCGCACACACGCCCAg > 2:2563669/4‑96 (MQ=255) aCCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCa > 2:2292715/1‑100 (MQ=255) cccGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCa > 2:3669643/1‑99 (MQ=255) ccGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCaaa > 1:3031880/1‑100 (MQ=255) ccGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTACAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACAAACGCCCAGCTCaaa > 2:1040801/1‑100 (MQ=255) gcgACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGc < 1:224063/100‑1 (MQ=255) cgACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCg < 1:1086338/100‑1 (MQ=255) cgACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCg < 1:3159100/100‑1 (MQ=255) cAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGttt < 1:3775935/100‑1 (MQ=255) cAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGttt < 1:797526/100‑1 (MQ=255) aaCGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGtttt > 2:421178/1‑100 (MQ=255) aCGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTtc > 1:1692436/1‑100 (MQ=255) aCGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTtc < 1:675974/100‑1 (MQ=255) gTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTtctc < 1:2431550/100‑1 (MQ=255) gTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCCCTTTTTCTGCGCACACACGCCCAGCTCACACGGCGTTTtcac < 1:2837867/100‑3 (MQ=255) tCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCa > 2:2257937/1‑100 (MQ=255) tCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCa > 1:2372477/1‑100 (MQ=255) aTTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATc < 1:1318360/100‑1 (MQ=255) tttGTGGTTCGGCAAAATCTTCCAGAACGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCg > 2:1118044/1‑100 (MQ=255) ttGTGGTTCGGCAAAATCTTCCAGACTGCCTCAATTAGCCGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGc < 2:3929745/100‑1 (MQ=255) ttGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGc < 2:2590676/100‑1 (MQ=255) gtgGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTg < 1:3091720/100‑1 (MQ=255) tgGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTgc > 2:531025/1‑100 (MQ=255) ggCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTa > 1:3350854/1‑100 (MQ=255) gCAACATCTTCCCGCTTGCCTCAGCTAGCGGCT‑CAGGTAGCCGCTTTTTCTGCGCACGCGCGCCCAGCTTAAACGGCGTTTTCTCATCGCTGCGCTCTa < 2:3810289/99‑1 (MQ=255) gCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTaa > 2:110857/1‑100 (MQ=255) aaaaTCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTaaaa < 2:2372472/100‑1 (MQ=255) aaaaTCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTaaaa < 1:3879750/100‑1 (MQ=255) aaTCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAatc < 2:4154778/100‑1 (MQ=255) aTCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAatca < 2:1374187/100‑1 (MQ=255) cTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAatcat > 1:1503895/1‑99 (MQ=255) tCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCAc > 1:3565212/1‑100 (MQ=255) ccgAATGTCTCAATTACCGGCT‑CATGTAGCCGCTTTTTCTCCGCACACACGCCCAGCTCAAACCGCGTTTTCTCATCGCTGCGCTCTAAAATAATCAggc > 2:3152178/3‑100 (MQ=255) cAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCAcgc < 2:3582984/100‑1 (MQ=255) aGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACGCGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAAGCAGCAcgcg < 2:820981/100‑1 (MQ=255) aTGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGtt < 1:648763/100‑1 (MQ=255) gcgcagaaaaaGCGGCTACATG‑AGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTa > 2:1736021/11‑100 (MQ=37) gcagaaaaaGCGGCTACATG‑AGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACg > 1:2349949/9‑100 (MQ=38) ccTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACg < 2:2477914/100‑1 (MQ=255) ccTCAATTAGCGGCC‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCCGCTCAACCGGCGCTTTCTCATCCCTGCGCTCTAAAATCATCACGCGGTTCCg > 1:116529/1‑100 (MQ=255) cTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACGCGCCCAGCTCAAACGGCGTCTTCTCACCGCTGCGCTCTAAAATCATCACGCGGTTACGc < 2:281237/100‑1 (MQ=255) cTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGc < 1:456509/100‑1 (MQ=255) cTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGc > 1:110806/1‑100 (MQ=255) gaaaaaGCGGCTACATG‑AGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCAc > 1:1976100/6‑100 (MQ=255) gaaaaaGCGGCTACATG‑AGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCAc > 1:1089156/6‑100 (MQ=255) cAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCa < 2:362195/99‑1 (MQ=255) aaTTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCAcc < 2:2802031/100‑1 (MQ=255) aaaaGCGGCTACATG‑AGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCg > 1:4134863/4‑100 (MQ=255) aaaaGCGGCTACATG‑AGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCg > 2:779704/4‑100 (MQ=255) aGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGtt > 1:841352/1‑100 (MQ=255) cGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCg < 2:858419/100‑1 (MQ=255) ggCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCgg > 1:2536570/1‑100 (MQ=255) gCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCggg > 1:3973943/1‑100 (MQ=255) nt‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCgggg > 1:229834/2‑100 (MQ=255) | AGGGAAAAATGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGC > NC_000913/3956874‑3957072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |