Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,868,865:1 +G 15.9% intergenic (+23/‑90) yeaG → / → yeaH protein kinase, endogenous substrate unidentified; autokinase/UPF0229 family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,868,8651.G15.9% 544.6 / 111.7 164intergenic (+23/‑90)yeaG/yeaHprotein kinase, endogenous substrate unidentified; autokinase/UPF0229 family protein
Reads supporting (aligned to +/- strand):  ref base . (71/67);  new base G (10/16);  total (81/83)
Fisher's exact test for biased strand distribution p-value = 2.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.65e-01

Only 100 of 166 total aligned reads displayed.

TGATGGAAAAAGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGT  >  NC_000913/1868766‑1868964
                                                                                                    |                                                                                                   
tgatgGAAAAAGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGt                                                                                                      >  1:2094914/1‑100 (MQ=255)
  atgGAAAAAGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑Ta                                                                                                   >  1:34832/1‑100 (MQ=255)
  atgGAAAAAGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑Ta                                                                                                   <  2:1385539/100‑1 (MQ=255)
     gAAACAGGCTACACCCGTAAACATGTGCGGTTACAGTGCGAATAGTATTTGCGCGTACGTGAATCGTCTTAACAACCCTGGCCCGGTACGCATGT‑TAcc                                                                                                 <  2:2535989/99‑1 (MQ=255)
     gAAAAAGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCg                                                                                                >  1:2669397/1‑100 (MQ=255)
       aaaaGGCTACGCCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCggg                                                                                              <  2:1353740/100‑1 (MQ=255)
       aaaaGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCggg                                                                                              <  1:67737/100‑1 (MQ=255)
       aaaaGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCggg                                                                                              <  1:65728/100‑1 (MQ=255)
        aaaGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGc                                                                                             <  2:3886096/100‑1 (MQ=255)
        aaaGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTA‑ACATGTGTACCGGGc                                                                                             <  2:2956381/100‑1 (MQ=255)
        aaaGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTA‑ACATGTGTACCGGGc                                                                                             <  2:3714141/100‑1 (MQ=255)
        aaaGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTA‑ACATGTGTACCGGGc                                                                                             <  2:1884298/100‑1 (MQ=255)
         aaGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGcc                                                                                            <  1:2917418/100‑1 (MQ=255)
         aaGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGcc                                                                                            <  2:1084993/100‑1 (MQ=255)
            gCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTA‑ACATGTGTACCGGGccagg                                                                                         <  1:2611742/100‑4 (MQ=38)
             cTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACa                                                                                        <  2:2848101/100‑1 (MQ=255)
             cTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTAGTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACAAGT‑TACCGGGCCTACa                                                                                        >  2:1190618/1‑100 (MQ=255)
              tACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACaa                                                                                       >  1:863654/1‑100 (MQ=255)
              tACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACaa                                                                                       >  1:3551209/1‑100 (MQ=255)
               acacCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAAc                                                                                      <  1:1753332/100‑1 (MQ=255)
                cacCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACg                                                                                     >  1:1893517/1‑100 (MQ=255)
                cacCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACg                                                                                     >  1:2297850/1‑100 (MQ=255)
                cacCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACg                                                                                     >  1:1890968/1‑100 (MQ=255)
                 acCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGa                                                                                    <  1:834496/100‑1 (MQ=255)
                 acCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGa                                                                                    <  1:834780/100‑1 (MQ=255)
                  cccGTAAACAGGTGGGTTTACTGTGCGAAGGGGATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTA‑ACATGTGTACCGGGccagg                                                                                         <  2:3855748/94‑4 (MQ=37)
                  cccGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACg                                                                                     <  2:1687284/98‑1 (MQ=255)
                  cccGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGAc                                                                                   >  1:2125372/1‑100 (MQ=255)
                  cccGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCCTACGTAACTCGTCTTAACAAACCTGGCACGGTACACATGT‑TACCGGGACTACAACGAc                                                                                   >  2:2727658/1‑100 (MQ=255)
                   ccGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAAc                                                                                      <  2:1276323/96‑1 (MQ=255)
                    cGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAg                                                                                 >  1:2473226/1‑100 (MQ=255)
                    cGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAg                                                                                 <  1:21795/100‑1 (MQ=255)
                     gTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGc                                                                                <  1:3946206/100‑1 (MQ=255)
                         aCAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAAc                                                                            <  1:285917/100‑1 (MQ=255)
                           aGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCg                                                                          <  2:3432506/100‑1 (MQ=255)
                             gTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTg                                                                        <  1:1720694/100‑1 (MQ=255)
                                cGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGGCTACAACGACAGCGAACCGTggg                                                                      >  1:135191/1‑99 (MQ=255)
                                cGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGc                                                                     <  2:1017216/100‑1 (MQ=255)
                                cGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGc                                                                     >  1:2460199/1‑100 (MQ=255)
                                 gTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGcn                                                                    <  1:3804378/100‑2 (MQ=255)
                                 gTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGcc                                                                    >  1:2990520/1‑100 (MQ=255)
                                   ttACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTg                                                                  <  1:1540315/100‑1 (MQ=255)
                                    tACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTga                                                                 >  1:3153905/1‑100 (MQ=255)
                                    tACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGACTACAACGACAGCGAACCGTGGGCCTga                                                                 >  2:2934580/1‑100 (MQ=255)
                                      cTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGTGCCTgag                                                                >  2:3133206/1‑99 (MQ=255)
                                           cGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCgg                                                          >  1:2093180/1‑100 (MQ=255)
                                           cGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCgg                                                          <  1:3094044/100‑1 (MQ=255)
                                            gAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGc                                                         >  2:1783815/1‑100 (MQ=255)
                                            gAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGc                                                         <  2:287790/100‑1 (MQ=255)
                                            gAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGc                                                         <  1:716440/100‑1 (MQ=255)
                                               tGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAac                                                      >  1:1203174/1‑100 (MQ=255)
                                                 gTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAacac                                                    >  1:4164631/1‑100 (MQ=255)
                                                  tATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAAcaca                                                   <  1:2065328/100‑1 (MQ=255)
                                                    tttGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAgg                                                 >  1:3074505/1‑100 (MQ=255)
                                                      tGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCg                                               <  2:2436237/100‑1 (MQ=255)
                                                       gcgcGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGt                                              >  1:851677/1‑100 (MQ=255)
                                                        cgcgTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTa                                             <  2:3551192/100‑1 (MQ=255)
                                                        cgcgTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTa                                             <  2:881133/100‑1 (MQ=255)
                                                          cgtacgtaAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGc                                           <  1:470007/100‑1 (MQ=255)
                                                            tacgtaAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCAt                                         >  1:1169976/1‑100 (MQ=255)
                                                            tacgtaAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCAt                                         >  1:3027038/1‑100 (MQ=255)
                                                            tacgtaAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCAt                                         <  1:530609/100‑1 (MQ=255)
                                                             acgtaAATCGTCTTAACAACCCTGGCCCGTTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCa                                          <  2:458068/98‑1 (MQ=255)
                                                              cgtaAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACCCAGGCGTAGCAt                                         >  2:3702502/1‑98 (MQ=255)
                                                              cgtaAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTAGGCCTGAGAAGCGGCAACACAGGCGTAGCATAc                                       >  2:893408/1‑100 (MQ=255)
                                                               gtaAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TGCCGGGCCTACAACGACAGCGAACCGTGGGCCTGCGCAGCGGCAACACAGGCGTAGCCTACa                                      >  2:1514384/1‑100 (MQ=255)
                                                                taAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAg                                     >  1:881164/1‑100 (MQ=255)
                                                                taAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAg                                     >  1:2624598/1‑100 (MQ=255)
                                                                taAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAg                                     <  1:3677495/100‑1 (MQ=255)
                                                                 aaaTCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGt                                    >  1:2785915/1‑100 (MQ=255)
                                                                     cGTCTTAACAACCCTGGCCCTGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTgg                                 <  2:1020279/99‑1 (MQ=255)
                                                                      gTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCTTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGc                                >  2:2456610/1‑99 (MQ=255)
                                                                      gTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCa                               <  1:2252283/100‑1 (MQ=255)
                                                                      gTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCa                               <  2:744426/100‑1 (MQ=255)
                                                                       tCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCaa                              >  1:311867/1‑100 (MQ=255)
                                                                        cTTAACAACCCTGGCCCGGTACACATGT‑TACCGGTCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCaaa                             >  2:3148257/1‑100 (MQ=255)
                                                                        cTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCaaa                             >  1:4102489/1‑100 (MQ=255)
                                                                          tgtcgttgtaggCCCGGTA‑ACATGTGTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATg                           >  1:3246910/11‑100 (MQ=25)
                                                                          tAACAACCCGGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATg                           <  2:1856077/100‑1 (MQ=255)
                                                                           aacaacCCTGGCCCGGTACACCTGT‑TACCGGGCCTACAACGACAGCGACCCGTGGGCCTGAGAAGCGGCAACACAGGCGTCGCATACAGTTGGCCAATgt                          >  2:506279/1‑100 (MQ=255)
                                                                           aacaacCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATgt                          >  1:1117192/1‑100 (MQ=255)
                                                                            acaacCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATgta                         >  2:3327481/1‑100 (MQ=255)
                                                                            acaacCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATgta                         >  1:3379098/1‑100 (MQ=255)
                                                                              gttgtaggCCCGGTA‑ACATGTGTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATgtagt                       >  1:349175/7‑100 (MQ=38)
                                                                                  cTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACgg                   >  1:409993/1‑100 (MQ=255)
                                                                                    ggCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACATTTGCCAACTgtatgctacgc                 <  2:1203173/100‑9 (MQ=255)
                                                                                    ggCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACgggg                 <  1:1783819/100‑1 (MQ=255)
                                                                                    ggCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACgggg                 >  1:3903570/1‑100 (MQ=255)
                                                                                    ggCCCGGTA‑ACATGTGTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACgggg                 >  2:863021/1‑100 (MQ=255)
                                                                                     gCCCGGTA‑ACATGTGTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACggggg                >  2:16030/1‑100 (MQ=255)
                                                                                     gCCCGGTA‑ACATGTGTACCGGGCCTACAACGACAGCGAACCGTAGGCCTGAGAAGCGGCAACACAGGCGTAGCACACAGTTGGCAAATGTAGTACggggg                >  2:3384278/1‑100 (MQ=255)
                                                                                      cccGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACgggggg               <  1:3327496/100‑1 (MQ=255)
                                                                                      cccGGTA‑ACATGTGTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACggg                  >  2:60810/1‑97 (MQ=255)
                                                                                       ccGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGc              <  2:201324/100‑1 (MQ=255)
                                                                                              acaTGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGAc       >  2:1031668/1‑100 (MQ=255)
                                                                                              acaTGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGAc       <  1:2573352/100‑1 (MQ=255)
                                                                                                aTGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGAcc      >  2:3015554/1‑99 (MQ=255)
                                                                                                 tGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTg    <  2:3798584/100‑1 (MQ=255)
                                                                                                 tGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGAGGCATATGACCTg    <  1:2818158/100‑1 (MQ=255)
                                                                                                   t‑tACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGt  >  1:3057038/1‑100 (MQ=255)
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TGATGGAAAAAGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGT‑TACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGT  >  NC_000913/1868766‑1868964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑