| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 526259 = | NA (NA) | 10 (0.070) | 6/168 | NT | 100% | coding (2999/4281 nt) | rhsD | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | 526275 = | 0 (0.000) | coding (3015/4281 nt) | rhsD | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
GTTTACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑cgacc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/526357‑526259‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGC > NC_000913/526275‑526377 GTTTACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑C < 2:2986566/100‑1GTTTACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑C < 2:1366051/100‑1GTTTACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑C < 1:3808043/100‑1GTTTACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑C < 1:3747849/100‑1GTTTACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑C < 1:3491460/100‑1 TTTACGCGACAGCGACGTCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑C < 2:1665793/99‑1 TTTACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CG > 2:3052270/1‑100 TTTACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGCCGTAGAGGTAGCGGCTCT‑CG > 2:860589/1‑100 TTTACGCGACAGCGAAATACACACCGTCAGGTCAGGCTCCCGCCGCCAGACCCGTTTTTCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CG > 2:1391351/1‑100 TTACGCGACAGCGACCTCCCCCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGA < 2:1775901/100‑1 TTACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGA > 2:2918346/1‑100 TTACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGA < 2:2212617/100‑1 TTACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGA < 1:1646631/100‑1 TACGCGACCGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGA < 2:3459370/99‑1 TACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGAC < 2:3418506/100‑1 TACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGAC > 2:3466699/1‑100 ACGCGACAGCGACATCCCCCCCGTCAGGTCACGCTCCCGTCGTCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGACC < 2:2940670/100‑1 ACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGACC < 1:2918356/100‑1 ACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGACC < 2:2113296/100‑1 ACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGACC < 2:1780381/100‑1 ACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGACC < 2:700936/100‑1 CGCGACAGCGACATCCACCCCGTCAGTTCACGCTCCCGCCGCCAGACCCGTTTTTCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGAC > 2:616223/1‑98 CGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCATCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGACC > 1:1475487/1‑99 CGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCTTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGCGGTAGCGGCTCT‑CGACC > 2:612258/1‑97 GCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTCTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑CGACCCGtggc > 2:2610574/1‑94 CAGCGGGTCGTAGAGGTAGCGGCTCT‑CGACCCGCTGGGGCGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGGGGAGGTCGC > 2:3485243/1‑97 GCGGGTCGTAGAGGTAGCGGCTCT‑CGACCCGCTGGGACGGCGAATGGCAAAACGGGGCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCG > 1:5525/1‑100 CGGGTCGTAGAGGTAGCGGCTCT‑CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGCCCTGACGGGGCGGATGTCGCTGGCG > 2:459635/1‑99 CGGGTCGTAGAGGTAGCGGCTCT‑CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGC > 1:380689/1‑100 GGGTCGTAGAGGTAGCGGCTCT‑CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCG > 1:1574344/1‑100 GGGTCGTAGAGGTAGCGGCTCT‑CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCG > 1:3884846/1‑100 GGTCGTAGAGGTAGCGGCTCT‑CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGT > 1:4149727/1‑100 GGTCGTAGAGGTAGCGGCTCT‑CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGT > 1:1893617/1‑100 GGTCGTAGAGGTAGCGGCTCT‑CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGC > 2:1234131/1‑98 GTCGTAGAGGTAGCGGCTCTACGACCCGCTGGGACGGCGAATGGCAAAAGGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGGGGATGTCGCTGTCGCG > 2:446833/1‑99 ccACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAT > 1:3880081/3‑100 CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAT > 1:1842786/1‑100 CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAT > 2:1007078/1‑100 ggCCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATG < 2:1892537/98‑1 GACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATG > 1:3059970/1‑100 GACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATG > 2:14600/1‑100 ACCCGCGGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGG < 2:1310374/100‑1 nCCGCTGGGACGGCGAATGGCAAAACGGGTCTGACGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGC > 2:2516980/2‑100 CCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGC < 2:2387744/100‑1 CCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGC > 2:1837758/1‑100 CCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGC > 1:2042839/1‑100 CCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGC > 1:1324154/1‑100 CCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGCGAGCGTGACCTGACGGGGTGGATGTCGCTTTCGCGTAAACCGGAGGTGACGTGGTATGGn < 1:1542423/100‑2 GTTTACGCGACAGCGACATCCACCCCGTCAGGTCACGCTCCCGCCGCCAGACCCGTTTTGCCATTCGCCGTCCCAGCGGGTCGTAGAGGTAGCGGCTCT‑cgacc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/526357‑526259‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGC > NC_000913/526275‑526377 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |