New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 758413 =NA (NA)14 (0.100) 10/164 NT NA noncoding (5/118 nt) RIP67 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site RIP67 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site
?NC_000913 758445 = NA (NA)noncoding (37/118 nt) RIP67 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site RIP67 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site

Only 100 of 224 total aligned reads displayed.

TCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGC  >  NC_000913/758314‑758512
                                                                                                   |                                                                                                   
ctgcatttctttgttacgcctgatgcgctgcgcttatcaggcctacgggtaatgacttgtaggccggataaggcgttcacgccgcatccggcactggttg                                                                                                     <  1:2056003‑M1/1‑1 (MQ=255)
 tgcatttctttgttacgcctgatgcgctgcgcttatcaggcctacgggtaatgacttgtaggccggataaggcgttcacgccgcatccggcactggttGc                                                                                                    >  1:2382937‑M1/99‑100 (MQ=255)
 tgcatttctttgttacgcctgatgcgctgcgcttatcaggcctacgggtaatgacttgtaggccggataaggcgttcacgccgcatccggcactggttGc                                                                                                    <  2:1593506‑M1/2‑1 (MQ=255)
  gcatttctttgttacgcctgatgcgctgcgcttatcaggcctacgggtaatgacttgtaggccggataaggcgttcacgccgcatccggcactggttGcc                                                                                                   <  2:428269‑M1/3‑1 (MQ=255)
  gcatttctttgttacgcctgatgcgctgcgcttatcaggcctacgggtaatgacttgtaggccggataaggcgttcacgccgcatccggcactggttGcc                                                                                                   <  1:4040227‑M1/3‑1 (MQ=255)
  atGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGcc                                                                                                   <  1:487851/100‑1 (MQ=255)
  atGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGcc                                                                                                   >  1:2669224/1‑100 (MQ=255)
   tGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCt                                                                                                  >  1:2204875/1‑100 (MQ=255)
   catttctttgttacgcctgatgcgctgcgcttatcaggcctacgggtaatgacttgtaggcctgataaggcgttcacgccgcatccggcactggttGCCt                                                                                                  >  2:2237792‑M1/97‑100 (MQ=255)
      aCTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGAt                                                                                               >  2:2089374/1‑100 (MQ=255)
      aCTGCGTCAGTCTATGTCCGACGGGGCTCAACCCGACGCGCGCCTTCGGCCATATCAAGTCGATGTTTTTGCAACGTAATGCGTAAACCGTAGGCCTGAt                                                                                               <  2:3441605/100‑1 (MQ=255)
       tccgatctgtgtATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATa                                                                                              <  2:857225/92‑1 (MQ=255)
        tGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATaa                                                                                             >  2:2680014/1‑100 (MQ=255)
          cGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGa                                                                                           >  2:136179/1‑100 (MQ=255)
           gTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAg                                                                                            <  2:217280/98‑1 (MQ=255)
               gtgtATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGatcgga                                                                                      >  1:857225/1‑95 (MQ=255)
                  tATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAg                                                                                   <  1:2388807/100‑1 (MQ=255)
                       ccGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCg                                                                              >  2:554460/1‑100 (MQ=255)
                        cGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCg                                                                              >  1:1858394/1‑99 (MQ=255)
                         gcaGGGGCTGAACCCGACGCGCGCCATCGGCAATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAACCGTCGCa                                                                            >  2:3331223/3‑100 (MQ=255)
                         gAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCa                                                                            >  1:700233/1‑100 (MQ=255)
                            ggggCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCa                                                                         <  1:2977874/100‑1 (MQ=255)
                             gggCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAg                                                                        <  1:1600754/100‑1 (MQ=255)
                             gggCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAg                                                                        <  1:376503/100‑1 (MQ=255)
                             gcgcttatcaggcctacgggtaatgacttgtaggccggataaggcgttcacgccgcatccggcactggttGCCTGATAAGACGCGCAAGCGTCGCATCAg                                                                        >  1:559908‑M1/71‑100 (MQ=255)
                              ggCTGAACCCGACGCGCGCCATCGGCCATATCAGGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAgg                                                                       >  2:2769363/1‑100 (MQ=255)
                              ggCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAgg                                                                       >  1:2155314/1‑100 (MQ=255)
                              cgcttatcaggcctacgggtaatgacttgtaggccggataaggcgttcacgccgcatccggcactggttGCCTGATAAGACGCGCAAGCGTCGCATCAgg                                                                       >  1:2747743‑M1/70‑100 (MQ=255)
                               cgatctcccGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGc                                                                      <  1:66431/94‑1 (MQ=255)
                                cttatcaggcctacgggtaatgacttgtaggccggataaggcgttcacgccgcagccggcactggttGTCTGATAAGACGCGCAAGCGTCGCATCAGGCa                                                                     >  2:2436096‑M1/68‑100 (MQ=255)
                                cTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCa                                                                     >  1:4118872/1‑100 (MQ=255)
                                 ttatcaggcctacgggtaatgacttgtaggccggatcaggcgttcacgccgcatccggcactggttGCCTGATAAGACGCGCAAGCGTCGCATCAGGCaa                                                                    >  1:2950155‑M1/67‑100 (MQ=255)
                                 ttatcaggcctacgggtaatgacttgtaggccggataaggcgttcacgccgcatccggcactggttGCCTGATAAGACGCGCAAGCGTCGCATCAGGCaa                                                                    >  2:31570‑M1/67‑100 (MQ=255)
                                 tGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCaa                                                                    >  1:1044309/1‑100 (MQ=255)
                                  gAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAc                                                                   <  2:965692/100‑1 (MQ=255)
                                    aCCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGAAAcc                                                                  <  2:2605528/99‑1 (MQ=255)
                                     cccGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAg                                                                <  1:1404955/100‑1 (MQ=255)
                                       cGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTg                                                              <  2:1004637/100‑1 (MQ=255)
                                        gACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGc                                                             <  2:3058173/100‑1 (MQ=255)
                                        accattcgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGc                                                             >  2:520099/7‑100 (MQ=255)
                                          ctacgggtaatgacttgtaggccggataaggcgttcacgccgcatccggcactggttGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCg                                                           >  1:2980516‑M1/58‑100 (MQ=255)
                                          cgcgcgCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCg                                                           <  1:316704/100‑1 (MQ=255)
                                          cgcgcgCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCg                                                           >  1:3625731/1‑100 (MQ=255)
                                           gcgcgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCgg                                                          <  2:3560353/100‑1 (MQ=255)
                                           gcgcgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATAAGGCAACCCGTGCCgg                                                          >  1:3922192/1‑100 (MQ=255)
                                            cgcgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGa                                                         >  2:767013/1‑100 (MQ=255)
                                             gcgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGAt                                                        <  1:2116369/100‑1 (MQ=255)
                                              cgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATg                                                       <  2:1274970/100‑1 (MQ=255)
                                                ccATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATgcg                                                     <  1:192870/100‑1 (MQ=255)
                                                   tCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATgcggcg                                                  <  1:1740597/100‑1 (MQ=255)
                                                    cGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATgcggcg                                                  >  2:759053/1‑99 (MQ=255)
                                                     ggCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTg                                                >  1:920448/1‑100 (MQ=255)
                                                     ggCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTg                                                <  2:3298590/100‑1 (MQ=255)
                                                     ggCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTg                                                >  1:435759/1‑100 (MQ=255)
                                                      gCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGa                                               >  1:1561970/1‑100 (MQ=255)
                                                          tatCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGCATccggcactggttg                                           <  1:3878513/100‑9 (MQ=37)
                                                          tatCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGAAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGc                                           >  2:2687709/1‑100 (MQ=255)
                                                           atCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATCAGACGCGCAAGCGCCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGcc                                          <  2:1320725/100‑1 (MQ=255)
                                                           atCAAGTCGATGTTGTTGCAACGTAATGCGTAAACAGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGcc                                          <  2:1742833/100‑1 (MQ=255)
                                                            tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCt                                         >  2:3311639/1‑100 (MQ=255)
                                                            tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCt                                         <  2:3213969/100‑1 (MQ=255)
                                                            tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCt                                         >  2:2661859/1‑100 (MQ=255)
                                                             cAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGcc                                          <  2:3687999/98‑1 (MQ=255)
                                                             cAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCtt                                        >  1:3328650/1‑100 (MQ=255)
                                                              aaGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTa                                       >  1:337459/1‑100 (MQ=255)
                                                              aaGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTa                                       >  2:2127789/1‑100 (MQ=255)
                                                              aaGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTa                                       <  2:606117/100‑1 (MQ=255)
                                                              aaGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTa                                       >  1:3442821/1‑100 (MQ=255)
                                                               cgTCGATGTTGTTGCAAAGTAATGCGTAAACCGTAGCCCTGATAAGACGCGGAAGCGTCGCATCAGCCAACCAGTGCCGGATGCGGCGGGATCGCCCTa                                       >  2:3704123/2‑99 (MQ=37)
                                                                 tCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATcc                                    <  2:1416378/100‑1 (MQ=255)
                                                                 tCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATcc                                    >  1:2717804/1‑100 (MQ=255)
                                                                    aTGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGc                                 <  2:2510153/100‑1 (MQ=255)
                                                                    aTGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATAAGGCGTTCACGCCGCATCCGGc                                 <  1:1436513/100‑1 (MQ=25)
                                                                     tgttgtTGCAGCGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCgg                                  <  2:1681760/98‑1 (MQ=255)
                                                                       ttgttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                              <  1:757929/100‑1 (MQ=255)
                                                                        tgttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                             >  2:296128/1‑100 (MQ=255)
                                                                         gttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                             <  2:3883628/99‑1 (MQ=255)
                                                                         gttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACa                            <  2:3041188/100‑1 (MQ=255)
                                                                         gttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACa                            <  1:2772055/100‑1 (MQ=255)
                                                                         gttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACa                            <  1:3915943/100‑1 (MQ=255)
                                                                           tgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAg                          >  1:1272563/1‑100 (MQ=255)
                                                                           tgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAg                          <  1:1875851/100‑1 (MQ=255)
                                                                            gCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGt                         >  1:1195296/1‑100 (MQ=255)
                                                                             cAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTc                        >  2:1780879/1‑100 (MQ=255)
                                                                             cAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTc                        <  2:66874/100‑1 (MQ=255)
                                                                                     tGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCg                >  2:3069929/1‑100 (MQ=255)
                                                                                        gTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAg             >  1:3581938/1‑100 (MQ=255)
                                                                                         tAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAgg            >  1:329910/1‑100 (MQ=255)
                                                                                           aaCCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGcc          >  1:3226078/1‑100 (MQ=255)
                                                                                           aaCCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGcc          <  1:2479309/100‑1 (MQ=255)
                                                                                           aaCCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGGGAACGCCTTATCCGGCCTACAAGTCATTAACCGGAGGcc          >  2:2697922/1‑100 (MQ=255)
                                                                                            aCCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCt         <  2:4117582/100‑1 (MQ=255)
                                                                                            aCCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCt         <  1:136179/100‑1 (MQ=255)
                                                                                            aCCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCt         >  1:58127/1‑100 (MQ=255)
                                                                                              cGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGa       <  2:3957193/100‑1 (MQ=255)
                                                                                               gTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGAt      >  1:2320849/1‑100 (MQ=255)
                                                                                                tAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATa     <  1:2575060/100‑1 (MQ=255)
                                                                                                tAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATa     <  1:296128/100‑1 (MQ=255)
                                                                                                  ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAag   <  2:1087451/100‑1 (MQ=255)
                                                                                                   GCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAagc  >  1:1975710‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGC  >  NC_000913/758314‑758512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.