New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2539674NA (NA)25 (0.180) 15/164 NT NA intergenic (‑91/+43) cysM/cysA cysteine synthase B (O‑acetylserine sulfhydrolase B)/sulfate/thiosulfate transporter subunit
?NC_000913 = 2539688 NA (NA)intergenic (‑105/+29) cysM/cysA cysteine synthase B (O‑acetylserine sulfhydrolase B)/sulfate/thiosulfate transporter subunit

Only 100 of 274 total aligned reads displayed.

TGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGC  >  NC_000913/2539575‑2539772
                                                                                                   |                                                                                                  
    cTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACACACCTTGCCATTAAAAAGCCCGGATcgc                                                                                                >  2:1914306/1‑100 (MQ=255)
     tCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATcgcg                                                                                               >  2:693054/1‑100 (MQ=255)
      cACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCgg                                                                                              <  1:3465921/100‑1 (MQ=255)
      cACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCgg                                                                                              <  2:1364272/100‑1 (MQ=255)
      cACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCgg                                                                                              <  1:1585648/100‑1 (MQ=255)
         gATCTCTATCCGTACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTCCATTAAAAAGCCCGGATCGCGGGAAg                                                                                          >  2:2190239/1‑100 (MQ=255)
          aTCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAg                                                                                          <  1:926663/100‑1 (MQ=255)
             tctATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAgcgc                                                                                       >  2:424095/1‑100 (MQ=255)
              ctATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGcc                                                                                      >  2:3203689/1‑100 (MQ=255)
              ctATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGcc                                                                                      >  1:431975/1‑100 (MQ=255)
                  ccATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccg                                                                                  <  2:3168341‑M2/100‑5 (MQ=255)
                   cATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccgg                                                                                 <  2:746457‑M1/100‑20 (MQ=255)
                   cATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgg                                                                                 <  2:1142142‑M2/100‑6 (MQ=255)
                   cATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtc                                                                                    <  2:2906726‑M2/97‑3 (MQ=255)
                    aTACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccggg                                                                                >  1:1453296‑M2/1‑94 (MQ=255)
                    aTACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccggg                                                                                >  1:440388‑M2/1‑94 (MQ=255)
                    aTACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccggg                                                                                >  1:886656‑M2/1‑94 (MQ=255)
                     tACGTGGTGTTGCCTGATGCGACGCTTGCTCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccggg                                                                                <  2:4049322‑M1/99‑21 (MQ=255)
                     tACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggc                                                                               <  1:3160772‑M2/100‑8 (MQ=255)
                       cGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccgggctt                                                                             <  2:1887223‑M1/100‑24 (MQ=255)
                       cGTGGGGTTGCCTGATGCGACGCTTGGGCGGTTTATGAGGTCTACAGGTTACAAAAAATGCCAATAAAAAGCCCGGATCGCGGGAAGCGCCTCCgg                                                                                 <  2:2548873/96‑1 (MQ=37)
                        gtggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCACTAAAAAGCCCGGAggcgcttcccgcgatccgggcttt                                                                            <  2:2244930‑M1/100‑25 (MQ=255)
                         tggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccgggctttt                                                                           <  1:127296‑M1/100‑26 (MQ=255)
                           gtgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccgggcttttta                                                                         <  2:3751612‑M1/100‑28 (MQ=255)
                           gtgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTaa                                                                         >  2:1273078/1‑100 (MQ=255)
                             gtTGCCTGATGCGGCGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccgggctttttaa                                                                        <  2:3305676‑M1/99‑29 (MQ=255)
                             gtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACa                                                                       <  2:39201/100‑1 (MQ=255)
                               tGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggctcttcccgcgatcctggctttttaatgg                                                                     <  2:1626796‑M1/100‑32 (MQ=255)
                               tGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACAtt                                                                     >  1:688738/1‑100 (MQ=255)
                                gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                    >  2:3616284/1‑100 (MQ=255)
                                gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                    <  2:2102150/100‑1 (MQ=255)
                                  cTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCAc                                                                  <  1:3300648/100‑1 (MQ=255)
                                  cTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCAc                                                                  <  1:1440694/100‑1 (MQ=255)
                                   tGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACt                                                                 >  1:3687955/1‑100 (MQ=255)
                                    gATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTACCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTc                                                                >  2:2325883/1‑100 (MQ=255)
                                     aTGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCa                                                               <  1:112804/100‑1 (MQ=255)
                                       gCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAACGCCCGGAggcgcttcccgcgatccgggctttttaatggcaaggttt                                                             <  1:3968968‑M1/100‑40 (MQ=255)
                                       gCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCGCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCaa                                                              >  2:1450607/1‑99 (MQ=255)
                                       gCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAc                                                             <  1:1082192/100‑1 (MQ=255)
                                        cGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAcc                                                            <  2:2983249/100‑1 (MQ=255)
                                           cGCCTGCGCGTCTTATCAGGTCCACAGGCTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGACGCGCCTAAGGGAGTTTAACATACCCTCAACCTAt                                                         <  2:829127/100‑1 (MQ=255)
                                               tGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAgg                                                     >  1:1703935/1‑100 (MQ=255)
                                                gcgcGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGgc                                                    <  1:496266/100‑1 (MQ=255)
                                                  gcgTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGgcgc                                                  <  1:1406396/100‑1 (MQ=255)
                                                     tCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCttt                                               >  2:2566957/1‑100 (MQ=255)
                                                      cTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtg                                              <  1:2110782/100‑1 (MQ=255)
                                                       ttATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtgt                                             >  1:2622175/1‑100 (MQ=255)
                                                           cAGGTCTACAGGTTACAAACCTTGCCATTAAAACGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCga                                         >  2:4173961/1‑100 (MQ=255)
                                                           cAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCga                                         >  1:3799504/1‑100 (MQ=255)
                                                            agctCTACAGGAGACAACCCTTGCCATTAAAAACCCCGGACCGCGAGAAGCGCCACCCGGCGTTTAACATTCACTCCCCCCATCAGGCGCTTtgtga                                           <  2:3981299/94‑2 (MQ=255)
                                                            aGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgag                                        <  2:3470409/100‑1 (MQ=255)
                                                             ggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgaga                                       >  2:920418/1‑100 (MQ=255)
                                                              gTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGagag                                      >  1:503895/1‑100 (MQ=255)
                                                                 tACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCa                                    <  2:1630007/99‑1 (MQ=255)
                                                                  aCAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAg                                  >  1:843977/1‑100 (MQ=255)
                                                                   cAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgca                                 <  1:3750456‑M2/100‑54 (MQ=255)
                                                                   cAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGt                                 >  1:3273515/1‑100 (MQ=255)
                                                                     ggTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTc                               >  1:2967048/1‑100 (MQ=255)
                                                                      gTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTcc                              >  1:76339/1‑100 (MQ=255)
                                                                      gTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTcc                              <  2:3160758/100‑1 (MQ=255)
                                                                         aCAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCa                           >  1:3573463/1‑100 (MQ=255)
                                                                         aCAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCa                           <  1:1876791/100‑1 (MQ=255)
                                                                          cAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAt                          >  1:2428074/1‑100 (MQ=255)
                                                                          cAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAt                          >  1:3052231/1‑100 (MQ=255)
                                                                               cTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCgg                     <  1:1194306/100‑1 (MQ=255)
                                                                                  gCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGtt                  <  1:4045129/100‑1 (MQ=255)
                                                                                   ccATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGttt                 >  2:76843/1‑100 (MQ=255)
                                                                                   ccATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGttt                 >  2:2388580/1‑100 (MQ=255)
                                                                                    cATTAAAAAGCCCGGATCGCGGTAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCCGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTc                <  2:1038198/100‑1 (MQ=255)
                                                                                    cATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaa                <  2:606286‑M2/100‑71 (MQ=255)
                                                                                    cATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTc                >  1:3077011/1‑100 (MQ=255)
                                                                                    cATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTc                >  2:1933530/1‑100 (MQ=255)
                                                                                    cATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCAAGAGCAAGTTCCTCATCGCGGGTTTc                >  1:883040/1‑100 (MQ=255)
                                                                                     aTTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaac               <  2:2713302‑M2/100‑72 (MQ=255)
                                                                                     aTTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaac               <  1:1790726‑M2/100‑72 (MQ=255)
                                                                                     aTTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCg               >  1:2784769/1‑100 (MQ=255)
                                                                                      ttAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGa              >  1:3667528/1‑100 (MQ=255)
                                                                                       tAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacac             <  2:3751683‑M2/100‑74 (MQ=255)
                                                                                       tAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGAt             >  1:809073/1‑100 (MQ=255)
                                                                                       tAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGAt             <  1:615871/100‑1 (MQ=255)
                                                                                        aaaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATa            >  1:3113637/1‑100 (MQ=255)
                                                                                          aaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACg          >  1:2890753/1‑100 (MQ=255)
                                                                                           aaGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacg         <  2:1318948‑M2/100‑78 (MQ=255)
                                                                                            aGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgt        <  1:466470‑M2/100‑79 (MQ=255)
                                                                                            aGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCGGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCt        <  1:149173/100‑1 (MQ=255)
                                                                                             gCCCGGAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcacatcaggcaacaccacgta       >  2:159858‑M1/1‑7 (MQ=255)
                                                                                             gCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgta       <  1:3583019‑M2/100‑80 (MQ=255)
                                                                                             gCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgta       <  1:309223‑M2/100‑80 (MQ=255)
                                                                                             gCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgta       <  2:2036139‑M2/100‑80 (MQ=255)
                                                                                             gCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtc       >  1:3364704/1‑100 (MQ=255)
                                                                                              cccGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCACCCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtc       >  2:1782699/1‑99 (MQ=255)
                                                                                              cccGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtcg      >  1:3929389/1‑100 (MQ=255)
                                                                                               ccGGAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtatg     <  1:2369199‑M1/100‑96 (MQ=255)
                                                                                               ccGGAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtatg     >  1:1055693‑M1/1‑5 (MQ=255)
                                                                                                cGGAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtatgg    <  2:3747732‑M1/100‑97 (MQ=255)
                                                                                                cGGAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtatgg    <  1:914017‑M1/100‑97 (MQ=255)
                                                                                                cGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtcgtc    >  2:621007/1‑100 (MQ=255)
                                                                                                cGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtcgtc    >  2:658667/1‑100 (MQ=255)
                                                                                                 ggAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtatgga   >  1:600592‑M1/1‑3 (MQ=255)
                                                                                                 ggATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtcgtcg   >  1:2676463/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
TGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGC  >  NC_000913/2539575‑2539772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.