New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3203112 =NA (NA)13 (0.090) 8/164 NT NA coding (1222/1239 nt) cca fused tRNA nucleotidyl transferase/2'3'‑cyclic phosphodiesterase/2'nucleotidase and phosphatase
?NC_000913 3203140 = NA (NA)intergenic (+11/+170) cca/bacA fused tRNA nucleotidyl transferase/2'3'‑cyclic phosphodiesterase/2'nucleotidase and phosphatase/undecaprenyl pyrophosphate phosphatase

Only 100 of 230 total aligned reads displayed.

CAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCG  >  NC_000913/3203014‑3203210
                                                                                                  |                                                                                                  
 aaaaGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGc                                                                                                  <  2:3377091/100‑1 (MQ=255)
 aaaaGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGc                                                                                                  <  1:2370253/100‑1 (MQ=255)
  caatcaacgcctgatgcgacgcttgcgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGcc                                                                                                 <  1:294707‑M1/4‑1 (MQ=255)
  caatcaacgcctgatgcgacgcttgcgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGcc                                                                                                 >  1:2433577‑M1/97‑100 (MQ=255)
  aaaGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGcc                                                                                                 >  2:3126111/1‑100 (MQ=255)
   tccgatctcctgatgcgacgcttgcgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGccc                                                                                                >  2:1528177‑M1/96‑100 (MQ=255)
   aatcaacgcctgatgcgacgcttgcgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGccc                                                                                                >  1:772024‑M1/96‑100 (MQ=255)
   aatcaacgcctgatgcgacgcttgcgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGccc                                                                                                <  2:1085397‑M1/5‑1 (MQ=255)
   aaGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGccc                                                                                                <  2:3939684/100‑1 (MQ=255)
    aGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCa                                                                                               >  1:1453737/1‑100 (MQ=255)
     tcaacgcctgatgcgacgcttgcgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCaa                                                                                              >  1:1006194‑M1/94‑100 (MQ=255)
     gCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCaa                                                                                              <  1:2672063/100‑1 (MQ=255)
     gCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCaa                                                                                              <  2:3695805/100‑1 (MQ=255)
     gCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACAGCGGATTGCGTCGGAAGCCAGCTGGAAGGAACAACGTTGCCCaa                                                                                              >  2:344890/1‑100 (MQ=255)
        gtcgtTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGc                                                                                           <  1:3478469/100‑1 (MQ=255)
         tcgtTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGcc                                                                                          <  1:2416408/100‑1 (MQ=255)
           gtTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGGGGCGGTAGCCAGCTGGCAGGAACAACGTTGCCCAAAGCCTg                                                                                        >  2:1967779/1‑100 (MQ=255)
           gtTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTg                                                                                        <  1:1971741/100‑1 (MQ=255)
           gtTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTg                                                                                        >  1:836483/1‑100 (MQ=255)
           cctgatgcgacgcttgcgcgtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaatgcccagatcgga                                                                                        <  1:1528180‑M1/13‑8 (MQ=255)
            ttGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGa                                                                                       <  1:516761/100‑1 (MQ=255)
                aGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGa                                                                                   >  1:3196660/1‑100 (MQ=255)
                 gCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAg                                                                                  <  1:1649930/100‑1 (MQ=255)
                   gggATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTa                                                                                >  1:410617/1‑100 (MQ=255)
                       tttAAAGGTGTGGAGATTCGCGAGGAGCTGACTCGAAGGCGGATTGCGGCGGTAGCCAGCTGGCAGGAAGAACGTTGCCCAAAGCCTGAATGAGCATTg                                                                             >  2:4091928/1‑99 (MQ=255)
                        ttAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTggg                                                                           <  2:397869/100‑1 (MQ=255)
                         tAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGc                                                                          >  2:3087498/1‑100 (MQ=255)
                         tAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGc                                                                          >  1:2645757/1‑100 (MQ=255)
                         tAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGAGTGCGGGGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTTGGc                                                                          >  2:3497976/1‑100 (MQ=255)
                           aaGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGGGGCGGTAGCCAGCTGGAAGGAACAACGGTGCCCAAAGCCTGAATGAGTATTgg                                                                            >  2:2528867/1‑96 (MQ=255)
                           aaGGTGTGGAGATACGCGAGGAGCTGACCCGGCGGCGGATTGAGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCAt                                                                        >  1:2831644/1‑100 (MQ=255)
                            aGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCAtt                                                                       <  2:2077729/100‑1 (MQ=255)
                              gtcttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCAAAGCCTGAATGAGTATTGGGCAtttt                                                                     >  1:224654‑M1/69‑100 (MQ=255)
                               tgtgGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGGATTGGGCATTTTg                                                                    >  1:1780153/1‑100 (MQ=255)
                               tcttatcaggcctacaactgtcgttgacgggtagccggataaggcgtttacgaagcatccggctaaaTGCCCAAAGCCTGAATGAGTATTGGGCATTTTg                                                                    >  2:2906553‑M1/68‑100 (MQ=255)
                                 ttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGcc                                                                  >  1:2309121‑M1/66‑100 (MQ=255)
                                 ttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGcc                                                                  >  2:2963629‑M1/66‑100 (MQ=255)
                                 tgGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGcc                                                                  <  1:2591494/100‑1 (MQ=255)
                                  tatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCg                                                                 >  2:584817‑M1/65‑100 (MQ=255)
                                  tatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCg                                                                 >  1:1809889‑M1/65‑100 (MQ=255)
                                  ggAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCg                                                                 <  1:3684157/100‑1 (MQ=255)
                                  ggAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCg                                                                 >  1:2201505/1‑100 (MQ=255)
                                  ggAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCg                                                                 >  2:4143458/1‑100 (MQ=255)
                                      aTTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATg                                                             <  1:1252347/100‑1 (MQ=255)
                                       ttCGCGAGGAGCTGACCCGACGTCGGATTGCCGCGGTTGCCAGCTGGCAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgc                                                            <  2:2832490/100‑1 (MQ=255)
                                       ttCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgc                                                            >  1:4147046/1‑100 (MQ=255)
                                       ttCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTAGCCGGAtaa                                                            <  2:3272729/100‑3 (MQ=255)
                                        tCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcg                                                           >  2:238928/1‑100 (MQ=255)
                                         cgcgAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcgg                                                          >  1:1174727/1‑100 (MQ=255)
                                         cgcgAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcgg                                                          <  1:889246/100‑1 (MQ=255)
                                          gcgAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcggc                                                         <  1:1197827/100‑1 (MQ=255)
                                           cgAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAGAGCCTGAATGAGTATTGGGCATTGTGCCGGATgcggcg                                                        <  2:913976/100‑1 (MQ=255)
                                           cgAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcggcg                                                        <  2:1668893/100‑1 (MQ=255)
                                                agCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAAc                                                   >  1:1897615/1‑100 (MQ=255)
                                                 gCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACg                                                  >  1:1465929/1‑100 (MQ=255)
                                                  cTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTACACGc                                                 >  2:4168504/1‑100 (MQ=255)
                                                   tGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGcc                                                <  2:1465926/100‑1 (MQ=255)
                                                   tGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGcc                                                <  2:1752686/100‑1 (MQ=255)
                                                   tGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGcc                                                <  2:4117833/100‑1 (MQ=255)
                                                    gACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCt                                               >  2:1341761/1‑100 (MQ=255)
                                                     aCCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCtt                                              >  1:2753463/1‑100 (MQ=255)
                                                      cccGACGGCGGATTGCGGCGGTCGCCAGCTGGAAGGAACAACGTTGCCCATAGGCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGcc                                                <  2:666227/97‑1 (MQ=255)
                                                      cccGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTa                                             >  1:94399/1‑100 (MQ=255)
                                                      cccGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTa                                             <  2:1958013/100‑1 (MQ=255)
                                                       ccGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTAt                                            >  1:381746/1‑100 (MQ=255)
                                                        cGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATc                                           >  1:3542021/1‑100 (MQ=255)
                                                        cGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATc                                           >  2:2927423/1‑100 (MQ=255)
                                                         gatggcggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATcc                                          <  1:2226649/97‑1 (MQ=255)
                                                            ggcggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCggn                                       <  2:808385/100‑2 (MQ=255)
                                                            ggcggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGc                                       >  2:3765306/1‑100 (MQ=255)
                                                             gcggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCt                                      >  2:3822510/1‑100 (MQ=255)
                                                              cggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCt                                      >  1:1104822/1‑99 (MQ=255)
                                                              cggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTa                                     >  1:3646101/1‑100 (MQ=255)
                                                               ggATTGCGGCGGTAGCCAGCTGGAAGGAACATCGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTAc                                    <  2:3022477/100‑1 (MQ=255)
                                                                 aTTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACAt                                  >  1:1291122/1‑100 (MQ=255)
                                                                    gcggcgGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTc                               <  1:3040988/100‑1 (MQ=255)
                                                                    gcggcgGTAGCCAGCTGGAAGGAACAACGTTGCCAAAAGCCTGAATGAGTATTGGGCATTTTGCAGGATGAGGAGTAAACGCCTTATCCGGCTACATGTc                               >  1:2496194/1‑100 (MQ=255)
                                                                     cggcggTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCa                              <  1:4184174/100‑1 (MQ=255)
                                                                     cggcggTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCa                              >  2:2225684/1‑100 (MQ=255)
                                                                     cggcggTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCa                              >  1:315117/1‑100 (MQ=255)
                                                                      ggcggTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCaa                             >  1:3691089/1‑100 (MQ=255)
                                                                       gcggTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAAc                            <  2:2017104/100‑1 (MQ=255)
                                                                        cggTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACg                           <  1:604187/100‑1 (MQ=255)
                                                                         ggTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGa                          >  2:2494318/1‑100 (MQ=255)
                                                                           tAGCCAGCTGGAAGGAACAACGTTGCCCAACGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAGCGCCTTATCCGGCTACATGTaaaa                            <  2:4044235/96‑2 (MQ=255)
                                                                            aGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAg                       <  2:1836261/100‑1 (MQ=255)
                                                                             gctaGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCTTTAACCGGCTACATGTCAACGACAGt                      <  2:621538/97‑1 (MQ=255)
                                                                               cAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTg                    >  1:1915671/1‑100 (MQ=255)
                                                                                 gCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTa                  <  2:2721361/100‑1 (MQ=255)
                                                                                  cTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAg                 <  1:1485291/100‑1 (MQ=255)
                                                                                    ggaaggaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGc               >  1:656565/1‑100 (MQ=255)
                                                                                      aaggaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCt             >  2:852722/1‑100 (MQ=255)
                                                                                       aggagCAACGTTGCCCAAAGCCTGAATGGGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTg            <  2:2134711/100‑1 (MQ=255)
                                                                                         gaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGAt          >  1:38602/1‑100 (MQ=255)
                                                                                         gaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGAGGCGTAAACGCCTTATCCGACTAAATGTCAAAAAAAGATGTCGGACTGAt          >  1:3923106/1‑100 (MQ=25)
                                                                                          aacaacGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATa         <  2:2351391/100‑1 (MQ=255)
                                                                                           acaacGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATaa        >  1:1350197/1‑100 (MQ=255)
                                                                                              acGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGAc     <  2:2645750/100‑1 (MQ=255)
                                                                                               cGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGAcg    <  2:1980594/100‑1 (MQ=255)
                                                                                                 ttGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGAcgcg  <  1:344890/100‑1 (MQ=255)
                                                                                                  |                                                                                                  
CAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCG  >  NC_000913/3203014‑3203210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.