New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4201782 =149 (1.000)22 (0.180) 11/144 NT 16.7% intergenic (‑94/‑144) zraP/zraS Zn‑dependent periplasmic chaperone/sensory histidine kinase in two‑component regulatory system with ZraR
?NC_000913 4201828 = 99 (0.820)intergenic (‑140/‑98) zraP/zraS Zn‑dependent periplasmic chaperone/sensory histidine kinase in two‑component regulatory system with ZraR

Only 100 of 221 total aligned reads displayed.

TTTCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATGG  >  NC_000913/4201683‑4201881
                                                                                                   |                                                                                                   
tttCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACg                                                                                                     <  1:466762/100‑1 (MQ=255)
tcttcttctttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatg                                                                                                     >  2:922211‑M1/100‑100 (MQ=255)
 ttCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACg                                                                                                     <  1:3196591/99‑1 (MQ=255)
 ttCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGa                                                                                                    >  1:708449/1‑100 (MQ=255)
 cttcttctttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGa                                                                                                    <  1:3838164‑M1/2‑1 (MQ=255)
   cATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAg                                                                                                   >  2:3773110/1‑99 (MQ=255)
    cttctttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTa                                                                                                 <  2:2449105‑M1/5‑1 (MQ=255)
      ggTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGAGGGGTAATCTGGCATGATAAACGAGTaa                                                                                                >  1:4031449/1‑99 (MQ=255)
      ggTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTaaa                                                                                               >  2:2139314/1‑100 (MQ=255)
      ggTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTaaa                                                                                               >  2:46312/1‑100 (MQ=255)
      ggTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTaaa                                                                                               >  1:2471100/1‑100 (MQ=255)
      ggTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTaaa                                                                                               <  2:2531062/100‑1 (MQ=255)
      ggTTAATCCTCCAGTGGTTGTCTTACTTCGCGTGTTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTaaa                                                                                               >  2:2752779/1‑100 (MQ=255)
        tttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttctatGTGTaaaaa                                                                                             >  2:2193205‑M1/92‑100 (MQ=255)
        tttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTaaaaa                                                                                             <  1:2999729‑M1/9‑1 (MQ=255)
          tgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATg                                                                                           >  2:3139675‑M1/90‑100 (MQ=255)
          aaTCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATg                                                                                           <  2:3265428/100‑1 (MQ=255)
            tcctccAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGAc                                                                                         <  1:3619807/100‑1 (MQ=255)
            cctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGAc                                                                                         <  1:1267443‑M1/13‑1 (MQ=255)
            cctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGAc                                                                                         >  2:1980774‑M1/88‑100 (MQ=255)
            cctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGAc                                                                                         <  2:2104045‑M1/13‑1 (MQ=255)
             ctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACt                                                                                        >  2:2909898‑M1/87‑100 (MQ=255)
             cctccAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACt                                                                                        <  2:3455285/100‑1 (MQ=255)
              tgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTc                                                                                       <  1:1671741‑M1/15‑1 (MQ=255)
              ctccAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTc                                                                                       >  2:2256300/1‑100 (MQ=255)
               tccAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCg                                                                                      <  2:515531/100‑1 (MQ=255)
               gctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCg                                                                                      <  2:3660684‑M1/16‑1 (MQ=255)
               gctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCg                                                                                      <  1:621072‑M1/16‑1 (MQ=255)
                ctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGc                                                                                     >  2:3958135‑M1/84‑100 (MQ=255)
                 cAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGcc                                                                                    <  1:1890943/100‑1 (MQ=255)
                 cAGTGGTTGTCCTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGcc                                                                                    <  1:3331930/100‑1 (MQ=255)
                     ggTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCctgct                                                                                >  1:2580823/1‑100 (MQ=255)
                       ttGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCtgctgc                                                                              >  1:1989668/1‑100 (MQ=255)
                        tGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCg                                                                             >  1:2909360/1‑100 (MQ=255)
                        tGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCg                                                                             <  2:1788575/100‑1 (MQ=255)
                          tCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGTGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCggg                                                                           >  1:1786361/1‑100 (MQ=255)
                           cTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGt                                                                          >  2:2360153/1‑100 (MQ=255)
                             tACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGTTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCggg                                                                           >  1:3441005/1‑97 (MQ=255)
                             gacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAg                                                                        >  1:1444483‑M1/71‑100 (MQ=255)
                               cTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCg                                                                      <  2:195486/100‑1 (MQ=255)
                               cTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGAAATGACGGGTAATCTAGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCg                                                                      >  1:3535135/1‑100 (MQ=255)
                                 tCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAg                                                                    <  2:747585/100‑1 (MQ=255)
                                   agaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTc                                                                  >  1:591545‑M1/65‑100 (MQ=255)
                                   agaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTc                                                                  >  1:1018192‑M1/65‑100 (MQ=255)
                                    ggTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCa                                                                 >  2:1267443/1‑100 (MQ=255)
                                      aatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAtt                                                               >  1:948025‑M1/62‑100 (MQ=255)
                                       atcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAttt                                                              >  2:260080‑M1/61‑100 (MQ=255)
                                       atcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAttt                                                              >  1:1716425‑M1/61‑100 (MQ=255)
                                       agcatgccatcttttatcagcgcttaccctgcgcggtaacacaaaggcttaagtttcaatGAGTAAGAATGACTCGCCTGCTGCGGGTAGCGAGTCAttt                                                              >  2:1442594‑M1/61‑100 (MQ=255)
                                       aTTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGGGGGTAGCGAGTCAttt                                                              >  2:2456304/1‑100 (MQ=255)
                                       aTTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAttt                                                              >  2:4034035/1‑100 (MQ=255)
                                       aTTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAttt                                                              >  2:2999717/1‑100 (MQ=255)
                                        tcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAtttt                                                             >  1:458910‑M1/60‑100 (MQ=255)
                                          gCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTa                                                           >  2:1324060/1‑100 (MQ=255)
                                          gCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTa                                                           >  1:3062878/1‑100 (MQ=255)
                                          gCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTa                                                           >  1:3078267/1‑100 (MQ=255)
                                           tgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTAc                                                          >  1:2662477‑M1/57‑100 (MQ=255)
                                           cATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTAc                                                          >  1:1569673/1‑100 (MQ=255)
                                             tCTTCCGTGCCAACGATGAAAAGCTGATATGACGGGTAATCTGTCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTc                                                        <  2:2676065/100‑1 (MQ=255)
                                               atcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCAt                                                      >  2:654391‑M1/53‑100 (MQ=255)
                                                tCCGTGCCAACGATGAAACGCTGATATGACGGGTACTCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGGAGCGATTCATTGTTACTCa                                                       >  2:2501364/1‑98 (MQ=255)
                                                tCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCAtt                                                     <  1:2210275/100‑1 (MQ=255)
                                                  cGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACtatgcca                                                   >  1:1139800/1‑94 (MQ=255)
                                                    tGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGaaa                                                 >  1:1756541/1‑100 (MQ=255)
                                                     gCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGaaan                                                <  1:1316807/100‑2 (MQ=255)
                                                     gCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAAc                                                >  2:1577836/1‑100 (MQ=255)
                                                      tcAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACt                                               <  1:898778/99‑1 (MQ=255)
                                                      ccAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACt                                               <  1:1207558/100‑1 (MQ=255)
                                                          cGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAg                                           >  2:1894619/1‑100 (MQ=255)
                                                           gATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGc                                          <  1:2103550/100‑1 (MQ=255)
                                                               aaaCGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCttt                                      >  1:1953683/1‑100 (MQ=255)
                                                                aaCGCTGCTATGTCGGGTGATCTGGCATGATAAACGATTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTtg                                     <  2:391507/100‑1 (MQ=255)
                                                                aaCGCTGATATGACGGGTAATGTGGCATGATAAACGAGCAACAATGACTCGCTTGCTGAGGTTAGCGAAGCATTTTTACTCCTTTGAACGTAAGc                                          >  2:3496212/1‑95 (MQ=255)
                                                                 aCGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTtgt                                    <  1:789005/100‑1 (MQ=255)
                                                                  cGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTtgtg                                   <  2:2798261/100‑1 (MQ=255)
                                                                  cGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTtgtg                                   <  1:3735313/100‑1 (MQ=255)
                                                                   gCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTgtgt                                  <  1:3045416/100‑1 (MQ=255)
                                                                     tGATATGACGGGTAATCTGGCATGATAAAAGAGTAAAAATGAGTGGCCTGGTGCGGGTAGCGAGTCATTTTTATGCGTTGAAACTTAAGCCTTTGTGTTa                                >  2:1724643/1‑100 (MQ=255)
                                                                         atGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAgc                            >  1:994918/1‑100 (MQ=255)
                                                                          tGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAgcg                           <  1:338947/100‑1 (MQ=255)
                                                                           gACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAgcgc                          >  2:1654041/1‑100 (MQ=255)
                                                                            aCGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCa                         <  2:3983398/100‑1 (MQ=255)
                                                                             cGGGTAATCTGGCATTATAAACGAGTAAAAATGACTCGCCTGCTGCAGGTAGCTCGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAg                        >  2:1058564/1‑100 (MQ=255)
                                                                              gggTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAgg                       <  2:1698284/100‑1 (MQ=255)
                                                                               ggTAATCTGGCATGATAAACGAGTAAAACTGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAgg                       >  2:63179/1‑99 (MQ=255)
                                                                               ggTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAggg                      <  2:3388008/100‑1 (MQ=255)
                                                                               ggTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAggg                      >  2:2228167/1‑100 (MQ=255)
                                                                               ggTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAggg                      <  2:1989665/100‑1 (MQ=255)
                                                                                gTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGt                     <  1:2648657/100‑1 (MQ=255)
                                                                                     cTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAgcg                >  1:2121946/1‑100 (MQ=255)
                                                                                      tGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAgcgc               <  1:225642/100‑1 (MQ=255)
                                                                                       ggCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAATTTTACTAATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCt              >  2:838413/1‑100 (MQ=255)
                                                                                        gCATGATAAACGAGTAAAAATGACTCGCCTGCTGTGGGTAGCTTGTCGTTTATACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAgcg                <  2:1082828/97‑1 (MQ=255)
                                                                                           tcaTACACCAGTAAAAATGACTCCCCTGCTGCGGGTAGCGCGTCATTTGAACTAATTGAAACTTACGCCTTTGTGTTACAGCGCACGGTAAGCGCtn             <  2:4122555/95‑2 (MQ=255)
                                                                                           tGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATa          >  1:2416880/1‑100 (MQ=255)
                                                                                             aTAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATaaa        <  1:4127264/100‑1 (MQ=255)
                                                                                              tAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATaaaa       >  1:1932036/1‑100 (MQ=255)
                                                                                               aaaCGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAg      <  2:3068519/100‑1 (MQ=255)
                                                                                                   GAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATgg  >  2:4197500‑M1/1‑100 (MQ=255)
                                                                                                   GAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCATTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATgg  >  2:898045‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TTTCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATGG  >  NC_000913/4201683‑4201881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.