New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3163686NA (NA)8 (0.060) 6/166 NT NA intergenic (‑205/+29) plsC/parC 1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/DNA topoisomerase IV, subunit A
?NC_000913 = 3163707 NA (NA)intergenic (‑226/+8) plsC/parC 1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/DNA topoisomerase IV, subunit A

Only 100 of 224 total aligned reads displayed.

GGGAATTTTTATCGTTTCCGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCGCGCATCAACGTACCGCGGC  >  NC_000913/3163609‑3163806
                                                                                                  |                                                                                                   
gggAATTTTTATCGTTTCCGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTcccc                                                                                                    >  2:309708/1‑100 (MQ=255)
gggAATTTTTATCGTTTCCGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTcccc                                                                                                    >  1:1706201/1‑100 (MQ=255)
 ggAATTTTTATCGTTTCCGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCg                                                                                                   <  1:848320/100‑1 (MQ=255)
      ttttATCGTTTCCGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGCGGAAACAGCGCCCTCCCCGGCata                                                                                              >  2:1031826/1‑100 (MQ=255)
         tATCGTTTCCGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATCTTa                                                                                           >  1:1575390/1‑100 (MQ=255)
          aTCGTTTCCGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTAc                                                                                          >  2:1381306/1‑100 (MQ=255)
          aTCGTTTCCGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTAc                                                                                          <  1:575668/100‑1 (MQ=255)
            cGTTTCCGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTActc                                                                                        >  1:1092746/1‑100 (MQ=255)
            cGTTTCCGGGGGTTGAATACGCTGCAGGATGACGACTTAACGTTTCATGCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTActc                                                                                        >  2:3724709/1‑100 (MQ=255)
             gTTTCCGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTActct                                                                                       >  1:256284/1‑100 (MQ=255)
             gTTTCCGGGGGATGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTActct                                                                                       >  2:3217138/1‑100 (MQ=255)
               ttCGGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTc                                                                                     <  2:1806445/100‑1 (MQ=255)
               ttCCGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTc                                                                                     <  1:2251267/100‑1 (MQ=255)
                tCCGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCg                                                                                    <  1:928569/100‑1 (MQ=255)
                 ccGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGc                                                                                   >  1:595622/1‑100 (MQ=255)
                 ccGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGc                                                                                   <  1:130751/100‑1 (MQ=255)
                  cGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCt                                                                                  <  1:1560754/100‑1 (MQ=255)
                  cGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCt                                                                                  >  1:1233709/1‑100 (MQ=255)
                   gggggTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTa                                                                                 <  2:385243/100‑1 (MQ=255)
                      ggTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCa                                                                              <  2:3239641/100‑1 (MQ=255)
                       gTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCAc                                                                             >  2:314046/1‑100 (MQ=255)
                       gTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCAc                                                                             >  2:2484845/1‑100 (MQ=255)
                         tgcaTACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCAc                                                                             >  2:1565807/4‑98 (MQ=255)
                         tGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCg                                                                           <  1:3801960/100‑1 (MQ=255)
                              aCGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCgctgct                                                                      <  1:3205618/100‑1 (MQ=255)
                               cGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGctgctg                                                                     <  2:813700/100‑1 (MQ=255)
                               cGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGctgctg                                                                     >  2:3331239/1‑100 (MQ=255)
                                 cTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGc                                                                   >  1:2012395/1‑100 (MQ=255)
                                 cTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACGCTTCGCTATCACCGCTGCTGGc                                                                   >  2:2835876/1‑100 (MQ=255)
                                   gCCGGATGACGACTTAACATTTCATCCGGCGATCCTTGCAAGAGGGAGGACACAGCGCTCTCTCAGGCCTATCAATATTCGCTATCACCGcagctg                                                                     >  2:1924984/1‑96 (MQ=255)
                                    ccGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACg                                                                <  1:934134/100‑1 (MQ=255)
                                      ggATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGc                                                              >  2:1051741/1‑100 (MQ=255)
                                      ggATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGc                                                              <  1:635482/100‑1 (MQ=255)
                                       gATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCg                                                             <  2:4131723/100‑1 (MQ=255)
                                       aaTGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCg                                                             >  2:825077/2‑100 (MQ=255)
                                         tGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCgag                                                           <  2:2118104/100‑1 (MQ=255)
                                         tGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCgag                                                           >  1:3338971/1‑100 (MQ=255)
                                          gacgacTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCgagg                                                          <  1:2930010/100‑1 (MQ=255)
                                          gacgacTTAACGTGTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCgagg                                                          <  2:3659138/100‑1 (MQ=255)
                                            cgacTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCgaggag                                                        <  1:3687780/100‑1 (MQ=255)
                                             gacTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCgaggag                                                        >  2:2370543/1‑99 (MQ=255)
                                               cTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGt                                                     >  2:2908549/1‑100 (MQ=255)
                                               cTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGt                                                     >  1:4091185/1‑100 (MQ=255)
                                                ttAACGTTTCATCCGGCGTTCCATGCAAGCGGGAGGTAACAGCGCCCCCCCCGGCATGTTCCTCGTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTc                                                    <  2:1903215/100‑1 (MQ=255)
                                                   aCGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGa                                                  >  2:3438117/1‑99 (MQ=255)
                                                    cGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGAtc                                                <  1:4115743/100‑1 (MQ=255)
                                                    cGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGAtc                                                >  1:3930750/1‑100 (MQ=255)
                                                    cGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGAtc                                                <  1:1762747/100‑1 (MQ=255)
                                                     gTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGAtct                                               >  2:1142942/1‑100 (MQ=255)
                                                     gTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGAtct                                               <  1:1659779/100‑1 (MQ=255)
                                                     gTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGAtc                                                >  1:3044099/1‑99 (MQ=255)
                                                       ttCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCa                                             <  1:217204/100‑1 (MQ=255)
                                                        tCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCTGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCaa                                            <  2:2673870/100‑1 (MQ=255)
                                                         cATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTTCTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAac                                           <  1:1749430/100‑1 (MQ=255)
                                                         cATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCAGATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAac                                           <  2:3919409/100‑1 (MQ=255)
                                                          aTCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAaca                                          >  1:236285/1‑100 (MQ=255)
                                                          aTCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAaca                                          >  2:715154/1‑100 (MQ=255)
                                                          aTCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTACCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAaca                                          >  2:2580609/1‑100 (MQ=255)
                                                           tCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAacac                                         <  1:3399706/100‑1 (MQ=255)
                                                           tCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAacac                                         <  1:3608427/100‑1 (MQ=255)
                                                              ggCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACAcgat                                      >  1:1941126/1‑100 (MQ=255)
                                                                cGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACAcgatcg                                    <  1:1554934/100‑1 (MQ=255)
                                                                   tCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATa                                 <  1:3331254/100‑1 (MQ=255)
                                                                   tCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATa                                 >  2:3732475/1‑100 (MQ=255)
                                                                     cTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACg                               <  1:2382088/100‑1 (MQ=255)
                                                                       tGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACagatcggaagagca                            >  1:1253279/1‑92 (MQ=255)
                                                                       tGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCt                             >  2:588170/1‑100 (MQ=255)
                                                                        gCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTg                            >  1:2635531/1‑100 (MQ=255)
                                                                         cAAGCGGGAGGAAACAGCGCCCTCCCgcttgcaaggaacgccggatgaaacgttaagtcgtcatccggcagcgtattcaacccccggaaacgataaaaat                           <  2:807562‑M2/100‑75 (MQ=255)
                                                                           aGCGGGAGGAAACAGCGCCCTCCCgcttgcaaggaacgccggatgaaacgttaagtcgtcatccggcagcgtattcaacccccggaaacgataaaaattc                         <  1:2437170‑M2/100‑77 (MQ=255)
                                                                           aGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCaa                         >  1:2608656/1‑100 (MQ=255)
                                                                           aGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCaa                         >  2:47658/1‑100 (MQ=255)
                                                                              gggAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCCCCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAAcc                      <  1:286179/100‑1 (MQ=255)
                                                                              gggAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAAcc                      >  1:11983/1‑100 (MQ=255)
                                                                               ggaggaAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACcg                     >  1:3621940/1‑100 (MQ=255)
                                                                                gaggaAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACcgc                    <  2:947371/100‑1 (MQ=255)
                                                                                 aggaAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACcgcg                   <  2:1496313/100‑1 (MQ=255)
                                                                                  ggaAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCgcgc                  >  2:2448004/1‑100 (MQ=255)
                                                                                  ggaAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCgcgc                  >  1:3710176/1‑100 (MQ=255)
                                                                                  ggaAACAGCGCCCTCCCCGGCATATTACTATTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCgcgc                  >  2:2054440/1‑100 (MQ=255)
                                                                                   gaAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCGCGCa                 <  1:3717/100‑1 (MQ=255)
                                                                                   gaAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCGCGCa                 <  1:2107060/100‑1 (MQ=255)
                                                                                   gaAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCGCGCa                 >  1:3778700/1‑100 (MQ=255)
                                                                                   gaAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCGCGCa                 <  1:3876343/100‑1 (MQ=255)
                                                                                    aaaCAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCGCGCAt                >  1:2527900/1‑100 (MQ=255)
                                                                                     aaCAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACTGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCgcgc                  <  2:1702283/97‑1 (MQ=255)
                                                                                       naGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCGCGCATCaa             >  2:2324565/2‑100 (MQ=255)
                                                                                       cAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCGCGCATCaa             >  2:2768223/1‑100 (MQ=255)
                                                                                         gcgcCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCGCGCATCAACg           <  1:3141180/100‑1 (MQ=255)
                                                                                             ccTCCCgcttgcaaggaacgccggatgaaacgttaagtcgtcatccggcagcgtattcaacccccggaaacgataaaaattcccttgaaaccgttgttta       <  2:3563083‑M2/100‑95 (MQ=255)
                                                                                             ccTCCCgcttgcaaggaacgccggatgaaacgttaagtcgtcatccggcagcgtattcaacccccggaaacgataaaaattcccttgaaaccgttgttta       >  2:1591089‑M2/1‑6 (MQ=255)
                                                                                             ccTCCCgcttgcaaggaacgccggatgaaacgttaagtcgtcatccggcagcgtattcaacccccggaaacgataaaaattcccttgaaaccgttgttta       >  2:1263109‑M2/1‑6 (MQ=255)
                                                                                             ccTCCCgcttgcaaggaacgccggatgaaacgttaagtcgtcatccggcagcgtattcaacccccggaaacgataaaaattcccttgaaaccgttgttta       <  1:811666‑M2/100‑95 (MQ=255)
                                                                                             ccTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCGCGCATCAACGTAcc       <  1:1000328/100‑1 (MQ=255)
                                                                                             ccTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCGCGCATCAACGTAcc       <  2:753568/100‑1 (MQ=255)
                                                                                              cTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGCTCGATACGCTGCAAACCGCGCATCAACGTACcg      >  2:1203363/1‑100 (MQ=255)
                                                                                                cccgcttgcaaggaacgccggatgaaacgttaagtcgtcatccggcagcgtattcaacccccggaaacgataaaaattcccttgaaaccgttgtttattc    <  2:4053060‑M2/100‑98 (MQ=255)
                                                                                                cccgcttgcaaggaacgccggatgaaacgttaagtcgtcatccggcagcgtattcaacccccggaaacgataaaaattcccttgaaaccgttgtttattc    <  1:3522885‑M2/100‑98 (MQ=255)
                                                                                                cccgGGCATATTAATCGTCGCAATGACGACTGCTGGCACGGCGAGGAGACTCGATCTCATCACAATCGATACACTGCAAACCGCGCACCGACCTACctcg    >  2:2359617/1‑100 (MQ=255)
                                                                                                  cgcttgcaaggaacgccggatgaaacgttaagtcgtcatccggcagcgtattcaacccccggaaacgataaaaattcccttgaaaccgttgtttattc    <  1:2411852‑M2/98‑98 (MQ=255)
                                                                                                  |                                                                                                   
GGGAATTTTTATCGTTTCCGGGGGTTGAATACGCTGCCGGATGACGACTTAACGTTTCATCCGGCGTTCCTTGCAAGCGGGAGGAAACAGCGCCCTCCCCGGCATATTACTCTTCGCTATCACCGCTGCTGGCACGGCGAGGAGAGTCGATCTCAACACGATCGATACGCTGCAAACCGCGCATCAACGTACCGCGGC  >  NC_000913/3163609‑3163806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.