New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3620123 =	NA (NA)	13 (0.090)	9/166	NT	100%	coding (932/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	3620147 =	0 (0.000)					coding (956/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

ACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACAC  >  NC_000913/3620048‑3620246                                                                                                    |                                                                                                    cccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccag                                                                                                     >  2:573111‑M2/100‑100 (MQ=255) cccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccag                                                                                                     >  2:2790597‑M2/100‑100 (MQ=255)  ccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagc                                                                                                    >  1:2115499‑M2/99‑100 (MQ=255)  ccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagc                                                                                                    >  1:3507666‑M2/99‑100 (MQ=255)  ccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagc                                                                                                    >  1:3620742‑M2/99‑100 (MQ=255)  ccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagc                                                                                                    >  2:1080880‑M2/99‑100 (MQ=255)   cggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcg                                                                                                   <  1:3073541‑M2/3‑1 (MQ=255)    ngtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcgg                                                                                                  >  2:731411‑M2/97‑100 (MQ=255)    ggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcgg                                                                                                  >  1:45122‑M2/97‑100 (MQ=255)     gtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggc                                                                                                 <  1:3325779‑M2/5‑1 (MQ=255)      tatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcactagcggcg                                                                                                <  1:2207396‑M2/6‑1 (MQ=255)                                                     atacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccaGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCttt                                                 >  1:1752731‑M2/48‑100 (MQ=255)                                                     atacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccaGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCttt                                                 >  1:2417501‑M2/48‑100 (MQ=255)                                                       accgccagttcgccgcgtggcgtccagccatagcgcaccagcggcGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTttac                                               >  1:2206225‑M2/46‑100 (MQ=255)                                                         cgccagttcgccgcgtggcgtccagccatagcgcaccagcggcGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTttactt                                             >  2:3104208‑M2/44‑100 (MQ=255)                                                             agttcgccgcgtggcgtccagccatagcgcaccagcggcGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACga                                         >  2:1238067‑M2/40‑100 (MQ=255)                                                              gttcgccgcgtggcgtccagccatagcgcaccagcggcGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACgat                                        >  1:1005206‑M2/39‑100 (MQ=255)                                                              cgccagttcgccgcgtggcgtccagccatagcgcaccaGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACgat                                        >  1:1428355‑M2/39‑100 (MQ=255)                                                                tcgccgcgtggcgtccagccatagcgcaccagcggcGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACgatga                                      >  2:3949145‑M2/37‑100 (MQ=255)                                                                ccagttcgccgcgtggcgtccagccatagcgcaccaGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACgatga                                      >  2:2886565‑M2/37‑100 (MQ=255)                                                                  gccgcgtggcgtccagccatagcgcaccagcggcGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACgatgat                                     >  2:3257335‑M2/35‑99 (MQ=255)                                                                   gttcgccgcgtggcgtccagccatagcgcaccaGCGGCGAACTGGCGGTGGTGTATGACCGTCGCGGCAAACAGGTGCGCAGCTTTACTTACGATGATaa                                   >  2:2662628‑M2/34‑100 (MQ=255)                                                                   gttcgccgcgtggcgtccagccatagcgcaccaGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATaa                                   >  2:2662642‑M2/34‑100 (MQ=255)                                                                      cgccgcgtggcgtccagccatagcgcaccaGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATa                                >  1:289401‑M2/31‑100 (MQ=255)                                                                                                    GCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCacac  <  2:2963398‑M2/100‑1 (MQ=255)                                                                                                    GCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCacac  <  1:3961757‑M2/100‑1 (MQ=255)                                                                                                    GCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCacac  <  1:3110335‑M2/100‑1 (MQ=255)                                                                                                    |                                                                                                    ACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACAC  >  NC_000913/3620048‑3620246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.