| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,449,616 | C→G | 16.2% | G145A (GGG→GCG) ‡ | yfcO ← | DUF2544 family putative outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,449,616 | 0 | C | G | 16.2% | 502.9 / 83.8 | 192 | G145A (GGG→GCG) | yfcO | DUF2544 family putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (79/80); new base G (15/16); total (95/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.49e-01 | |||||||||||
Only 100 of 202 total aligned reads displayed.
AGGGTGAGCAGTTTTGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACC > NC_000913/2449517‑2449714 | aGGGTGAGCAGTTTTGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGcc > 2:1848392/1‑100 (MQ=255) ggTGAGCAGTTTTGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGcccc < 2:1815633/100‑1 (MQ=255) ggTGAGCAGTTTTGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGccc < 1:4113040/99‑1 (MQ=255) aGCAGTTTTGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGAt < 1:1277050/100‑1 (MQ=255) aGCAGTTTTGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGAt < 1:1985417/100‑1 (MQ=255) cAGTTTTGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATAc < 1:3121240/100‑1 (MQ=255) gTTTTGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACg > 2:2881004/1‑99 (MQ=255) tttGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATagtca < 2:1731152/100‑5 (MQ=38) tttGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCa < 2:2266959/100‑1 (MQ=255) ttGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCAc < 1:1069676/100‑1 (MQ=38) tGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACg < 1:1698920/100‑1 (MQ=38) tGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACg > 1:1551149/1‑100 (MQ=255) gACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGc > 1:2033564/1‑100 (MQ=255) aCTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACg < 1:480973/98‑1 (MQ=255) aCTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGcc < 1:2735294/100‑1 (MQ=255) cTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGccc > 2:1169861/1‑100 (MQ=255) cTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGcc < 1:3945402/99‑1 (MQ=255) ttACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACgaca < 1:1967592/99‑4 (MQ=37) tACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACgacacg < 1:2005300/100‑6 (MQ=25) tACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACgacacg < 2:3040951/100‑6 (MQ=25) tACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACgacacg < 1:2515884/100‑6 (MQ=25) aCTGACATAATTCTCATTCCATGAAACGTCTTAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGACGTATCAGGGGCCTGATA‑GTCACgacac < 2:1041865/98‑5 (MQ=25) tGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTgg < 2:2701058/100‑1 (MQ=255) gACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGga > 1:802565/1‑100 (MQ=255) gACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCCTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGga > 2:772365/1‑100 (MQ=255) cATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGgaga > 2:2605003/1‑100 (MQ=255) tAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAgg > 2:223393/1‑100 (MQ=255) ctcATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCa < 1:3070602/100‑1 (MQ=255) ctcATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCCTGTCGTGAC‑TATCAGGCCGCTGATACGTCACGCGCCCTGGAGAGGCtt > 2:1145093/1‑98 (MQ=255) tcATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCag < 1:3139250/100‑1 (MQ=255) tcATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCag > 1:2095971/1‑100 (MQ=255) cATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCaga > 1:597311/1‑100 (MQ=255) aTTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCagag > 1:1423251/1‑100 (MQ=255) aTTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCagag < 1:2126370/100‑1 (MQ=255) aTTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCagag < 1:3568510/100‑1 (MQ=255) ttCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGt < 2:730835/100‑1 (MQ=255) ccATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGtca > 2:220751/1‑100 (MQ=255) aTGAACCGTTATCAGGTTGAACAGAAACGGAGGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATGCGTTACGCACCCTGGAGAGGCTTCAGAGtcat > 2:3990652/1‑99 (MQ=255) aTGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGtcatt > 1:2113393/1‑100 (MQ=255) aTGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGtcatt < 2:2741313/100‑1 (MQ=255) tGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGtcattc > 1:2439243/1‑100 (MQ=255) tGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGtcattc > 2:1968363/1‑100 (MQ=255) aaaCGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGtcattcat < 1:2895584/100‑1 (MQ=255) aCGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCataa > 1:179957/1‑100 (MQ=255) cGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCataat > 2:427086/1‑100 (MQ=255) tCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCAtaataa > 1:2287381/1‑100 (MQ=255) aTAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATaacc < 1:219704/100‑1 (MQ=255) tAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATaacca < 2:2655265/100‑1 (MQ=255) tAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATaacca > 1:1588386/1‑100 (MQ=255) ggTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATaaccaacc > 1:133290/1‑100 (MQ=255) gTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCataatagatcggaa > 2:1567479/1‑92 (MQ=255) ttGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAaccaacca < 2:3411710/99‑1 (MQ=255) ttGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCAt > 1:1176571/1‑100 (MQ=255) ttGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCAt < 2:1252560/100‑1 (MQ=255) tGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATg < 1:1836507/100‑1 (MQ=255) gAACAGAAACTGATGTACAAATCGTGTCGTGAC‑TATCAGGCCCCTTATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATgg > 2:616441/1‑100 (MQ=255) gAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATgg < 1:275009/100‑1 (MQ=255) gAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCACCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATgg > 2:2290369/1‑100 (MQ=255) aaCAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGa < 1:1863922/100‑1 (MQ=255) aaCAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGa < 2:1527157/100‑1 (MQ=255) aCAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGAc < 2:1611304/100‑1 (MQ=255) aCAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGAc < 2:2114071/100‑1 (MQ=255) cAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACa > 1:3030090/1‑100 (MQ=255) cAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACa < 2:1691687/100‑1 (MQ=255) cAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACa < 2:37629/100‑1 (MQ=255) aGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACaa < 2:2768557/100‑1 (MQ=255) aaaCGGATGGACAAATCGTGCCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGa > 2:2564953/1‑100 (MQ=255) aaCGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGaa < 1:3459160/100‑1 (MQ=255) cGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGaaaa > 1:3991097/1‑100 (MQ=255) cGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGaaaa < 1:2564960/100‑1 (MQ=255) ggATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAg < 1:748317/100‑1 (MQ=255) aTGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTa > 1:3395007/1‑100 (MQ=255) gACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGa > 1:1006863/1‑100 (MQ=255) gACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCATGGAGAGGCTTCAGAGTCATTCAACATACCCCACCATGGACAAGAAAAGTAAg > 2:1489586/1‑99 (MQ=255) aCAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGAt < 1:3716234/100‑1 (MQ=255) cAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGAtt > 2:1988760/1‑100 (MQ=255) cAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGAtt < 2:668242/100‑1 (MQ=255) cAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGAtt > 1:384715/1‑100 (MQ=255) tcgtgtcgtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAAt < 1:377783/100‑1 (MQ=255) cgtgtcgtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAAtc < 1:3351271/100‑1 (MQ=255) gtgtcgtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAAtct > 2:412255/1‑100 (MQ=255) ggcgtgACGTATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATctct > 1:910866/3‑100 (MQ=37) cgtgACGTATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGc > 1:727377/1‑100 (MQ=38) cgtgACGTATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGc > 2:3182809/1‑100 (MQ=38) cgtgACGTATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGc > 1:300978/1‑100 (MQ=38) cgtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTg < 2:3609520/99‑1 (MQ=255) cgtgAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGc > 1:207183/1‑100 (MQ=255) gtgacgtATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCa > 2:4015125/7‑100 (MQ=38) gtgacgtATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCa > 1:3126850/7‑100 (MQ=38) tgacgtATCAGGGGCCTGATA‑GTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACAAACCAAGGACAAGAGAAGTAAGATTCAATCTCTGCag > 2:2833248/6‑100 (MQ=37) c‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCagatc > 2:3987059/1‑98 (MQ=255) c‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAgaga > 1:3933605/1‑100 (MQ=255) c‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAgaga > 1:2800008/1‑100 (MQ=255) tATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGAc > 2:2181664/1‑100 (MQ=255) nggCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCACTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATa > 2:78210/2‑100 (MQ=255) aGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCagatcggaag > 2:209811/1‑93 (MQ=255) aGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATa > 1:2935071/1‑100 (MQ=255) ggCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATaa > 1:4052097/1‑100 (MQ=255) ggCCCCTGATACGTCACGCCCCATGGAGAGGCTTCAGAGTCATTCATAATAACCAACCAGGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACaa > 2:2430672/1‑97 (MQ=255) ccccTGATACGTCACGCCCCCTGGAGAAGCTTCACAGTCATTCATAATAACCAACCATGCACAAGAAAAGCAAGATTCCATCTCTGCAGAGACAATAAcc < 2:2033969/100‑1 (MQ=255) | AGGGTGAGCAGTTTTGACTTACTGACATAATTCTCATTCCATGAAACGTCATAAGGTTGAACAGAAACGGATGGACAAATCGTGTCGTGAC‑TATCAGGCCCCTGATACGTCACGCCCCCTGGAGAGGCTTCAGAGTCATTCATAATAACCAACCATGGACAAGAAAAGTAAGATTCAATCTCTGCAGAGACAATAACC > NC_000913/2449517‑2449714 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |