| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,530,490 | T→C | 15.6% | intergenic (+86/‑96) | ydcD → / → yncI | putative immunity protein for RhsE/pseudogene |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,530,490 | 0 | T | C | 15.6% | 399.8 / 61.5 | 167 | intergenic (+86/‑96) | ydcD/yncI | putative immunity protein for RhsE/pseudogene |
| Reads supporting (aligned to +/- strand): ref base T (74/67); new base C (12/14); total (86/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.77e-01 | |||||||||||
Only 100 of 177 total aligned reads displayed.
TAAATGGTCATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATAAAAAAGGACGCCAGGTG > NC_000913/1530392‑1530588 | tAAGTGGTCATAATGCCAAACAACAGAAAGAGAAAAATATCAAATACATACAGAAAGACATGAGAGCAAGAGACGGGGCAGGGCAAGATCATGAAAATtg > 2:1137837/1‑100 (MQ=255)tAAATGGTCATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATtg < 1:2888275/100‑1 (MQ=255) aaTGGTCATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATtgtg < 1:2608595/100‑1 (MQ=255) aaTGGTCATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATtgtg < 1:203923/100‑1 (MQ=255) aaTGGTCATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATAAAGAAAGACATGAGAGAAAGGGACGAGGCAGGGCAAGATCAAGAAAAAtg > 2:1471431/1‑98 (MQ=255) aTGGTCATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGa < 1:2204251/100‑1 (MQ=255) aTGGTCATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGa < 1:1666828/100‑1 (MQ=255) tGGTCATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGAt < 1:1618182/100‑1 (MQ=255) ggTCATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATg < 2:3235714/100‑1 (MQ=255) gTCATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGt < 1:1057334/100‑1 (MQ=255) gTCATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGt > 1:445272/1‑100 (MQ=255) gTCATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGt > 1:1271032/1‑100 (MQ=255) tCATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTa < 1:674379/100‑1 (MQ=255) ctaTAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTa < 1:2353741/98‑1 (MQ=255) cATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTaa > 1:546262/1‑100 (MQ=255) aTAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTaag > 2:2353736/1‑99 (MQ=255) aTAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTaaa > 1:835941/1‑100 (MQ=255) tAATGAACGACACCAGAAAGAGAAAAATATGAAAAATATACAGAAAGACATGAGAGAAAAGTACAGGGCAGGTCACGATCATGAACATTGTGCTCTAAAt > 2:1074041/1‑100 (MQ=255) tAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAAt > 1:3584494/1‑100 (MQ=255) tAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAAt > 1:1071676/1‑100 (MQ=255) aTGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATTTACATCa < 2:2192762/100‑1 (MQ=255) tGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCAc > 1:1438691/1‑100 (MQ=255) aacaacACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGa > 1:2334835/1‑100 (MQ=255) acaacaCCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGAt < 1:1825973/100‑1 (MQ=255) aacaCCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGAttt < 2:931159/100‑1 (MQ=255) acacCAGAAAGAGAAAAATATAAACAACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGAtttt < 2:399078/100‑1 (MQ=255) acacCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGAtttt > 2:3477279/1‑100 (MQ=255) acacCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGAtttc > 2:2714955/1‑99 (MQ=255) cacCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTc > 1:1648317/1‑100 (MQ=255) cacCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTc > 2:3532369/1‑100 (MQ=255) acCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCa < 2:600224/100‑1 (MQ=255) acCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCa > 1:2076520/1‑100 (MQ=255) ccAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCAt > 2:1363858/1‑100 (MQ=255) ccAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATCGTGATTTACATCACAATTTTCAt < 1:4101392/100‑1 (MQ=38) ccAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATCGTGATTTACATCACAATTTTCAt < 1:3843824/100‑1 (MQ=38) ccAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGAGCAAGATCATAAAAATTGTGATGTAAGTCACGATTTTAAt > 2:1749998/1‑100 (MQ=255) ccAGAAAGAGAAAAAGATAAAATACATACAGAAAGGCATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAAGTGTGATGTAAATCACGATGTTCa > 2:839161/1‑99 (MQ=255) cAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCGAGATCATGAAAATCGTGATTTACATCACAATTTTCAtg < 1:730755/100‑2 (MQ=37) cAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATc > 2:2260246/1‑100 (MQ=255) cAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATc < 1:2667558/100‑1 (MQ=255) aGAAAGATAAAAATATAAAATACATACATAAAGACATGACATCAATGTACGGGTCAGTGCAATATCATGAAAATCGTGATTTACATCACAATTTTCAt < 2:2069388/98‑1 (MQ=16) aGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATCGTGATTTACATCACAATTTTCAtg < 2:1060540/99‑2 (MQ=37) gAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCtt < 1:3292702/100‑1 (MQ=255) aaaGAGAAAAATATAAAATACATACAGAAAGCCATGACAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCttt < 2:2822030/100‑1 (MQ=255) aaGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTg < 2:4105645/100‑1 (MQ=255) agagAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGc < 2:3901409/100‑1 (MQ=255) gagaAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCt < 1:3363654/100‑1 (MQ=255) agaAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCtt > 1:106422/1‑100 (MQ=255) agaAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCAGCTTTGCt > 1:1311121/1‑99 (MQ=255) gaAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCttt < 1:371271/100‑1 (MQ=255) aacaaTATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTa < 1:3490828/97‑1 (MQ=255) aaaaaTATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTa < 2:407686/100‑1 (MQ=255) aaaaTATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTaa < 1:1111409/100‑1 (MQ=255) aaaaTATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTaa < 1:778417/100‑1 (MQ=255) aaaaTATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTaa > 2:1725961/1‑100 (MQ=255) aaaaTATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTaa > 2:1744065/1‑100 (MQ=255) atatAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGc < 2:3538292/100‑1 (MQ=255) tataAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGcc > 1:1868204/1‑100 (MQ=255) tataAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGcc < 1:2906226/100‑1 (MQ=255) taAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTa < 2:1045742/100‑1 (MQ=255) aaaTACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACa < 2:4006694/100‑1 (MQ=255) atacatacAGAAAGGCATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAAGTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAgg < 1:996744/100‑1 (MQ=255) atacatacAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAgg < 2:1799755/100‑1 (MQ=255) catacaGAACGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGCTGa > 2:193530/1‑100 (MQ=255) catacaGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGa > 1:4195624/1‑100 (MQ=255) catacaGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGa > 2:518049/1‑100 (MQ=255) acaGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATc < 2:3616071/99‑1 (MQ=255) caGAAAGACATGAGAGCAAGGGACGGGGCAGAGCAAGATCATAAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCaa > 2:3892305/1‑100 (MQ=255) aGAAAGACATGCGTGCAAGGGACGGGTCAGGTCAAGATCATGAAAATTGTGATGTAAATCACAATTTTCATCTTTGCTTTAACGCCTACAGGTGATCa < 2:3079991/98‑1 (MQ=255) gACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTa < 1:3766018/100‑1 (MQ=255) gagaGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCtt > 2:1239558/1‑100 (MQ=255) gagaGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCtt < 1:3805436/100‑1 (MQ=255) gagCAAGGGACGGGTCAGGGCAAGATCAGGAAAATTGTGATGTAAAGCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTg < 1:2681329/100‑1 (MQ=255) gCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGa < 1:3862686/100‑1 (MQ=255) cAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGaa > 1:1899115/1‑100 (MQ=255) cAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGa > 1:1601130/1‑99 (MQ=255) ggACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAAc < 1:1701766/100‑1 (MQ=255) ggACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAAc > 1:4060410/1‑100 (MQ=255) gACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAGTCACGATTTTCGTCTTTGCTTTAACGACTACAGGTGATCAAAATTTAACCTTTGCAATAAc > 2:2234005/1‑99 (MQ=255) gACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAAc < 2:908215/99‑1 (MQ=255) gggcagggcaAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTTGAATAACTaaaa < 1:2763790/100‑1 (MQ=255) ggcagggcaAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTaaaaa < 1:1506512/100‑1 (MQ=255) ggcagagcaAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTaaaaa < 2:3172220/100‑1 (MQ=255) ggcaAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGTTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATaa > 2:3288136/1‑100 (MQ=255) ggcaAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATaa < 1:618851/100‑1 (MQ=255) ggcaAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATaa > 1:3955930/1‑100 (MQ=255) aaagcaaagaTGAAAATCGTGATTTACATCACAATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATaa > 2:1247096/10‑100 (MQ=21) aagcaaagaTGAAAATCGTGATTTACATCACAATTTTCATCTTTACATTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATcaa > 2:1932978/9‑100 (MQ=18) agcaaagaTGAAAATCGTGATTTACATCACAATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATaaaa > 2:1549234/8‑100 (MQ=25) agcaaagaTGAAAATCGTGATTTACATCACAATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATaaaa > 1:3576321/8‑100 (MQ=25) caaagaTGAAAATCGTGATTTACATCACAATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATaaaaaa > 1:3513781/6‑100 (MQ=25) aGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATaaaaaa > 1:2978603/1‑100 (MQ=255) aGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATaaaaaa > 1:2178311/1‑100 (MQ=255) gATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATAAAAAAg < 2:337971/100‑1 (MQ=255) aaagaTGAAAATCGTGATTTACATCACAATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATAAAAAAg > 1:2147203/5‑100 (MQ=37) aaagaTGAAAATCGTGATTTACATCACAATTTTAATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATAAAAAAg > 2:2510045/5‑100 (MQ=25) gaTGAAAATCGTGATTTACATCACAATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATAAAAAAGGAc > 1:280951/2‑100 (MQ=37) cATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATAAAAAAGGAc > 1:1950021/1‑100 (MQ=255) ttGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATAAAAAAGGACGCCAGGTg < 1:1795616/100‑1 (MQ=255) ttGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATAAAAAAGGACGCCAGGTg < 2:2844409/100‑1 (MQ=255) | TAAATGGTCATAATGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATGAAAATTGTGATGTAAATCACGATTTTCATCTTTGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAAAAAGATAAAAAAGGACGCCAGGTG > NC_000913/1530392‑1530588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |